RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 PPP6R1Q9UPN7 881 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 LRRFIP2Q9Y608 721 aaKnown RBP9.67□□□□□ -0.86
PKHD1-201ENST00000340994 ERCC6Q03468 1493 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 CASQ1P31415 396 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 C1orf141Q5JVX7 400 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 TAF4BQ92750 862 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 CYP46A1Q9Y6A2 500 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 COG3Q96JB2 828 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 HSPA4P34932 840 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 ME1P48163 572 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 FAM114A1Q8IWE2 563 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 ANKRD18BA2A2Z9 1011 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 GPATCH11Q8N954 259 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 GNAI3P08754 354 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 PPP4R3BQ5MIZ7 849 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 V9GYY5 206 aaPredicted RBP9.66□□□□□ -0.86
PKHD1-201ENST00000340994 FAM193AP78312 1265 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 NAA15Q9BXJ9 866 aaKnown RBP9.65□□□□□ -0.86
PKHD1-201ENST00000340994 TAOK3Q9H2K8 898 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 ST20-MTHFSA0A0A6YYL1 179 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 SOX12O15370 315 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 VPS36Q86VN1 386 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 TRIM22Q8IYM9 498 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 CCDC171Q6TFL3 1326 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 LNPKQ9C0E8 428 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 ZNF330Q9Y3S2 320 aaPredicted RBP9.65□□□□□ -0.86
PKHD1-201ENST00000340994 RBM28Q9NW13 759 aaKnown RBP9.65□□□□□ -0.86
PKHD1-201ENST00000340994 SAFB2Q14151 953 aaKnown RBP eCLIP9.65□□□□□ -0.86
PKHD1-201ENST00000340994 SPATA32Q96LK8 384 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 SCAND2PQ9GZW5 306 aaPredicted RBP9.65□□□□□ -0.87
PKHD1-201ENST00000340994 CETN2P41208 172 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 BCL2L13Q9BXK5 485 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 VPS37DQ86XT2 251 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 SENP3Q9H4L4 574 aaPredicted RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 CTDP1Q9Y5B0 961 aaPredicted RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 SMARCC1Q92922 1105 aaPredicted RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 SRRTQ9BXP5 876 aaKnown RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 KRT32Q14532 448 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 CCDC94Q9BW85 323 aaPredicted RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 FOXD1Q16676 465 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 TTC5Q8N0Z6 440 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 NSRP1Q9H0G5 558 aaKnown RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 RRP7AQ9Y3A4 280 aaKnown RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 CLCN1P35523 988 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 KIF20AO95235 890 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 CBX1P83916 185 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 ALS2CR12Q96Q35 445 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 FYCO1Q9BQS8 1478 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 TUBBP07437 444 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 SPA17Q15506 151 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 SH3BGRP55822 239 aaPredicted RBP9.63□□□□□ -0.87
PKHD1-201ENST00000340994 MYOM3Q5VTT5 1437 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 ANKRD62A6NC57 917 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 PAK3O75914 559 aaPredicted RBP9.63□□□□□ -0.87
PKHD1-201ENST00000340994 WASF1Q92558 559 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 FYB1O15117 783 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 ZNF428Q96B54 188 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 TEFQ10587 303 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 FMNL2Q96PY5 1086 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 TICAM2Q86XR7 235 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 UBTFL1P0CB47 393 aaPredicted RBP9.63□□□□□ -0.87
PKHD1-201ENST00000340994 CEP112Q8N8E3 955 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 SKIDA1Q1XH10 827 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 STMN4Q9H169 189 aaPredicted RBP9.63□□□□□ -0.87
PKHD1-201ENST00000340994 STK26Q9P289 416 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 CEP131Q9UPN4 1083 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 ERICH3Q5RHP9 1530 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 KANK4Q5T7N3 995 aaPredicted RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 DIAPH1O60610 1272 aaKnown RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 CCDC150Q8NCX0 1101 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 PPP1R12BO60237 982 aaPredicted RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 IFFO1Q0D2I5 559 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 FKBP5Q13451 457 aaPredicted RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 UVSSAQ2YD98 709 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 SYCE3A1L190 88 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 CCDC27Q2M243 656 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 GTF2E1P29083 439 aaPredicted RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 ANO10Q9NW15 660 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 A6NNZ2 444 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 TUBB8Q3ZCM7 444 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 AKNAQ7Z591 1439 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 RSRC1Q96IZ7 334 aaKnown RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 APAF1O14727 1248 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 SMAP1Q8IYB5 467 aaPredicted RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 RIPK4P57078 832 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 IPO4Q8TEX9 1081 aaKnown RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 FGFR1OPO95684 399 aaKnown RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 FSD1Q9BTV5 496 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 MSL1Q68DK7 614 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 TBC1D2BQ9UPU7 963 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 TDO2P48775 406 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 NOL7Q9UMY1 257 aaKnown RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 TTC31Q49AM3 519 aaPredicted RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 DAAM2Q86T65 1068 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 ARFGAP3Q9NP61 516 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 POTEJP0CG39 1038 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms