RNA–Protein interactions for RNA: ENST00000340954.11

STAU1-201, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STAU1, Length 3,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-201ENST00000340954 NINLQ9Y2I6 1382 aa13.53□□□□□ -0.24
STAU1-201ENST00000340954 TMED8Q6PL24 325 aaPredicted RBP13.53□□□□□ -0.24
STAU1-201ENST00000340954 CENPQQ7L2Z9 268 aaPredicted RBP13.53□□□□□ -0.24
STAU1-201ENST00000340954 IL27Q8NEV9 243 aa13.53□□□□□ -0.24
STAU1-201ENST00000340954 SPATA31D1Q6ZQQ2 1576 aa13.53□□□□□ -0.24
STAU1-201ENST00000340954 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.24
STAU1-201ENST00000340954 HSP90AB2PQ58FF8 381 aa13.52□□□□□ -0.24
STAU1-201ENST00000340954 RTL5Q5HYW3 569 aaPredicted RBP13.52□□□□□ -0.24
STAU1-201ENST00000340954 SULT6B1Q6IMI4 303 aa13.52□□□□□ -0.24
STAU1-201ENST00000340954 THEMISQ8N1K5 641 aaPredicted RBP13.52□□□□□ -0.24
STAU1-201ENST00000340954 SSH1Q8WYL5 1049 aa13.52□□□□□ -0.24
STAU1-201ENST00000340954 SLC4A3P48751 1232 aa13.52□□□□□ -0.25
STAU1-201ENST00000340954 LMOD2Q6P5Q4 547 aa13.52□□□□□ -0.25
STAU1-201ENST00000340954 NGEFQ8N5V2 710 aa13.51□□□□□ -0.25
STAU1-201ENST00000340954 KCNA6P17658 529 aa13.51□□□□□ -0.25
STAU1-201ENST00000340954 NOB1Q9ULX3 412 aaKnown RBP13.51□□□□□ -0.25
STAU1-201ENST00000340954 NOP58Q9Y2X3 529 aaKnown RBP13.51□□□□□ -0.25
STAU1-201ENST00000340954 BACH2Q9BYV9 841 aa13.5□□□□□ -0.25
STAU1-201ENST00000340954 FCHSD2O94868 740 aa13.5□□□□□ -0.25
STAU1-201ENST00000340954 PCDHB15Q9Y5E8 787 aa13.49□□□□□ -0.25
STAU1-201ENST00000340954 ZKSCAN2Q63HK3 967 aa13.49□□□□□ -0.25
STAU1-201ENST00000340954 XPCQ01831 940 aaPredicted RBP13.49□□□□□ -0.25
STAU1-201ENST00000340954 PNNQ9H307 717 aaKnown RBP13.49□□□□□ -0.25
STAU1-201ENST00000340954 MIS18AQ9NYP9 233 aa13.49□□□□□ -0.25
STAU1-201ENST00000340954 TTC21BQ7Z4L5 1316 aa13.48□□□□□ -0.25
STAU1-201ENST00000340954 NLRP6P59044 892 aa13.48□□□□□ -0.25
STAU1-201ENST00000340954 PDE3AQ14432 1141 aa13.48□□□□□ -0.25
STAU1-201ENST00000340954 DZIP1LQ8IYY4 767 aaKnown RBP13.48□□□□□ -0.25
STAU1-201ENST00000340954 TSPYL6Q8N831 410 aa13.48□□□□□ -0.25
STAU1-201ENST00000340954 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
STAU1-201ENST00000340954 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
STAU1-201ENST00000340954 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
STAU1-201ENST00000340954 KDM2BQ8NHM5 1336 aa13.48□□□□□ -0.25
STAU1-201ENST00000340954 IL13P35225 146 aa13.47□□□□□ -0.25
STAU1-201ENST00000340954 AMPHP49418 695 aa13.47□□□□□ -0.25
STAU1-201ENST00000340954 CCDC27Q2M243 656 aa13.47□□□□□ -0.25
STAU1-201ENST00000340954 MCM10Q7L590 875 aa13.47□□□□□ -0.25
STAU1-201ENST00000340954 IPO9Q96P70 1041 aaKnown RBP13.47□□□□□ -0.25
STAU1-201ENST00000340954 TRIM27P14373 513 aa13.47□□□□□ -0.25
STAU1-201ENST00000340954 KRT24Q2M2I5 525 aa13.46□□□□□ -0.25
STAU1-201ENST00000340954 ADAMTS13Q76LX8 1427 aa13.46□□□□□ -0.25
STAU1-201ENST00000340954 NFE2L2Q16236 605 aa13.46□□□□□ -0.25
STAU1-201ENST00000340954 NLRP1Q9C000 1473 aa13.46□□□□□ -0.26
STAU1-201ENST00000340954 EIF4A2Q14240 407 aaKnown RBP13.46□□□□□ -0.26
STAU1-201ENST00000340954 CPS1P31327 1500 aa13.46□□□□□ -0.26
STAU1-201ENST00000340954 C1orf115Q9H7X2 142 aa13.45□□□□□ -0.26
STAU1-201ENST00000340954 EDC4Q6P2E9 1401 aaKnown RBP13.45□□□□□ -0.26
STAU1-201ENST00000340954 FOXO3O43524 673 aa13.44□□□□□ -0.26
STAU1-201ENST00000340954 TMEM57Q8N5G2 664 aa13.44□□□□□ -0.26
STAU1-201ENST00000340954 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
STAU1-201ENST00000340954 PTPRUQ92729 1446 aa13.44□□□□□ -0.26
STAU1-201ENST00000340954 REREQ9P2R6 1566 aa13.44□□□□□ -0.26
STAU1-201ENST00000340954 GLIPR1L2Q4G1C9 344 aa13.44□□□□□ -0.26
STAU1-201ENST00000340954 CNPY4Q8N129 248 aa13.44□□□□□ -0.26
STAU1-201ENST00000340954 IQSEC2Q5JU85 1478 aa13.43□□□□□ -0.26
STAU1-201ENST00000340954 TICAM2Q86XR7 235 aa13.43□□□□□ -0.26
STAU1-201ENST00000340954 MVPQ14764 893 aaKnown RBP13.43□□□□□ -0.26
STAU1-201ENST00000340954 MBIPQ9NS73 344 aa13.43□□□□□ -0.26
STAU1-201ENST00000340954 MS4A1P11836 297 aa13.42□□□□□ -0.26
STAU1-201ENST00000340954 ATF7IPQ6VMQ6 1270 aa13.42□□□□□ -0.26
STAU1-201ENST00000340954 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
STAU1-201ENST00000340954 ESCO1Q5FWF5 840 aa13.42□□□□□ -0.26
STAU1-201ENST00000340954 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
STAU1-201ENST00000340954 PLEKHG1Q9ULL1 1385 aa13.42□□□□□ -0.26
STAU1-201ENST00000340954 C8orf58Q8NAV2 365 aa13.42□□□□□ -0.26
STAU1-201ENST00000340954 ZMYND15Q9H091 742 aa13.42□□□□□ -0.26
STAU1-201ENST00000340954 NRXN3Q9Y4C0 1643 aa13.42□□□□□ -0.26
STAU1-201ENST00000340954 NCLP19338 710 aaKnown RBP13.41□□□□□ -0.26
STAU1-201ENST00000340954 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
STAU1-201ENST00000340954 ATP7BP35670 1465 aa13.41□□□□□ -0.26
STAU1-201ENST00000340954 PDZRN3Q9UPQ7 1066 aa13.41□□□□□ -0.26
STAU1-201ENST00000340954 FAM161AQ3B820 660 aa13.41□□□□□ -0.26
STAU1-201ENST00000340954 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
STAU1-201ENST00000340954 PNPLA6Q8IY17 1366 aa13.41□□□□□ -0.26
STAU1-201ENST00000340954 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
STAU1-201ENST00000340954 PSMD1Q99460 953 aa13.4□□□□□ -0.26
STAU1-201ENST00000340954 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
STAU1-201ENST00000340954 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.26
STAU1-201ENST00000340954 RWDD1Q9H446 243 aaPredicted RBP13.4□□□□□ -0.26
STAU1-201ENST00000340954 MAP2P11137 1827 aaKnown RBP13.39□□□□□ -0.27
STAU1-201ENST00000340954 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
STAU1-201ENST00000340954 NPM3O75607 178 aaKnown RBP13.39□□□□□ -0.27
STAU1-201ENST00000340954 USP35Q9P2H5 1018 aa13.39□□□□□ -0.27
STAU1-201ENST00000340954 USP32Q8NFA0 1604 aa13.39□□□□□ -0.27
STAU1-201ENST00000340954 RBM25P49756 843 aaKnown RBP13.39□□□□□ -0.27
STAU1-201ENST00000340954 GNAI1P63096 354 aa13.39□□□□□ -0.27
STAU1-201ENST00000340954 APBB1O00213 710 aa13.38□□□□□ -0.27
STAU1-201ENST00000340954 PSME1Q06323 249 aa13.38□□□□□ -0.27
STAU1-201ENST00000340954 C8orf34Q49A92 452 aa13.38□□□□□ -0.27
STAU1-201ENST00000340954 DLC1Q96QB1 1528 aa13.38□□□□□ -0.27
STAU1-201ENST00000340954 PLEKHG3A1L390 1219 aa13.38□□□□□ -0.27
STAU1-201ENST00000340954 IPO8O15397 1037 aaKnown RBP13.38□□□□□ -0.27
STAU1-201ENST00000340954 SEC24BO95487 1268 aa13.38□□□□□ -0.27
STAU1-201ENST00000340954 LRRC7Q96NW7 1537 aa13.38□□□□□ -0.27
STAU1-201ENST00000340954 SIRT1Q96EB6 747 aa13.38□□□□□ -0.27
STAU1-201ENST00000340954 UBR1Q8IWV7 1749 aa13.37□□□□□ -0.27
STAU1-201ENST00000340954 VAMP4O75379 141 aa13.37□□□□□ -0.27
STAU1-201ENST00000340954 RTF1Q92541 710 aaKnown RBP13.37□□□□□ -0.27
STAU1-201ENST00000340954 RAD21O60216 631 aa13.37□□□□□ -0.27
STAU1-201ENST00000340954 CERS3Q8IU89 383 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms