RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 HTATSF1O43719 755 aaKnown RBP9.48□□□□□ -0.89
NUP43-201ENST00000340413 WNK3Q9BYP7 1800 aa9.48□□□□□ -0.89
NUP43-201ENST00000340413 IP6K1Q92551 441 aa9.48□□□□□ -0.89
NUP43-201ENST00000340413 PHLPP1O60346 1717 aa9.47□□□□□ -0.89
NUP43-201ENST00000340413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.47□□□□□ -0.89
NUP43-201ENST00000340413 DLG5Q8TDM6 1919 aa9.47□□□□□ -0.89
NUP43-201ENST00000340413 SLAIN2Q9P270 581 aa9.47□□□□□ -0.89
NUP43-201ENST00000340413 BRINP3Q76B58 766 aa9.47□□□□□ -0.89
NUP43-201ENST00000340413 RSPH6AQ9H0K4 717 aa9.47□□□□□ -0.89
NUP43-201ENST00000340413 BABAM1Q9NWV8 329 aa9.46□□□□□ -0.89
NUP43-201ENST00000340413 SOS1Q07889 1333 aaPredicted RBP9.46□□□□□ -0.89
NUP43-201ENST00000340413 PMFBP1Q8TBY8 1022 aa9.46□□□□□ -0.9
NUP43-201ENST00000340413 MAP3K19Q56UN5 1328 aa9.46□□□□□ -0.9
NUP43-201ENST00000340413 E9PSI1 815 aa9.46□□□□□ -0.9
NUP43-201ENST00000340413 NEFMP07197 916 aa9.46□□□□□ -0.9
NUP43-201ENST00000340413 ABTB2Q8N961 1025 aa9.46□□□□□ -0.9
NUP43-201ENST00000340413 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.46□□□□□ -0.9
NUP43-201ENST00000340413 NLRP6P59044 892 aa9.45□□□□□ -0.9
NUP43-201ENST00000340413 ARHGEF25Q86VW2 580 aa9.45□□□□□ -0.9
NUP43-201ENST00000340413 ZNF428Q96B54 188 aa9.45□□□□□ -0.9
NUP43-201ENST00000340413 HOXC9P31274 260 aa9.44□□□□□ -0.9
NUP43-201ENST00000340413 ORAI2Q96SN7 254 aa9.44□□□□□ -0.9
NUP43-201ENST00000340413 MAPK8IP3Q9UPT6 1336 aa9.44□□□□□ -0.9
NUP43-201ENST00000340413 NRAPQ86VF7 1730 aa9.44□□□□□ -0.9
NUP43-201ENST00000340413 GOLGA2Q08379 1002 aa9.43□□□□□ -0.9
NUP43-201ENST00000340413 SIPA1L3O60292 1781 aaPredicted RBP9.43□□□□□ -0.9
NUP43-201ENST00000340413 EIF4A2Q14240 407 aaKnown RBP9.43□□□□□ -0.9
NUP43-201ENST00000340413 NFE2L2Q16236 605 aa9.43□□□□□ -0.9
NUP43-201ENST00000340413 LRP6O75581 1613 aa9.43□□□□□ -0.9
NUP43-201ENST00000340413 SLFN5Q08AF3 891 aa9.42□□□□□ -0.9
NUP43-201ENST00000340413 EMILIN1Q9Y6C2 1016 aa9.42□□□□□ -0.9
NUP43-201ENST00000340413 U2AF1L5P0DN76 240 aaPredicted RBP9.42□□□□□ -0.9
NUP43-201ENST00000340413 U2AF1Q01081 240 aaKnown RBP eCLIP9.42□□□□□ -0.97e-9■■□□□ 13.3
NUP43-201ENST00000340413 SENP3Q9H4L4 574 aaPredicted RBP9.42□□□□□ -0.9
NUP43-201ENST00000340413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.42□□□□□ -0.92e-8■□□□□ 8.7
NUP43-201ENST00000340413 RGPD5Q99666 1765 aa9.41□□□□□ -0.9
NUP43-201ENST00000340413 GCP02774 474 aa9.41□□□□□ -0.9
NUP43-201ENST00000340413 MYH16Q9H6N6 1097 aa9.41□□□□□ -0.9
NUP43-201ENST00000340413 MRC1P22897 1456 aa9.41□□□□□ -0.9
NUP43-201ENST00000340413 GAS2L2Q8NHY3 880 aa9.41□□□□□ -0.9
NUP43-201ENST00000340413 KDM3BQ7LBC6 1761 aa9.41□□□□□ -0.9
NUP43-201ENST00000340413 TMPOP42166 694 aaKnown RBP9.41□□□□□ -0.9
NUP43-201ENST00000340413 AMPHP49418 695 aa9.41□□□□□ -0.9
NUP43-201ENST00000340413 HAP1P54257 671 aaPredicted RBP9.41□□□□□ -0.9
NUP43-201ENST00000340413 YTHDC1Q96MU7 727 aaKnown RBP9.41□□□□□ -0.9
NUP43-201ENST00000340413 VIRMAQ69YN4 1812 aaKnown RBP9.41□□□□□ -0.9
NUP43-201ENST00000340413 TCP11L2Q8N4U5 519 aa9.4□□□□□ -0.9
NUP43-201ENST00000340413 AAMPQ13685 434 aa9.4□□□□□ -0.9
NUP43-201ENST00000340413 WWC1Q8IX03 1113 aa9.4□□□□□ -0.9
NUP43-201ENST00000340413 LRRC59Q96AG4 307 aaKnown RBP9.4□□□□□ -0.9
NUP43-201ENST00000340413 ZRANB1Q9UGI0 708 aa9.4□□□□□ -0.9
NUP43-201ENST00000340413 TOM1O60784 492 aa9.4□□□□□ -0.91
NUP43-201ENST00000340413 N4BP2Q86UW6 1770 aaPredicted RBP9.4□□□□□ -0.91
NUP43-201ENST00000340413 AMOTQ4VCS5 1084 aa9.39□□□□□ -0.91
NUP43-201ENST00000340413 RGPD2P0DJD1 1756 aa9.39□□□□□ -0.91
NUP43-201ENST00000340413 SCN11AQ9UI33 1791 aa9.39□□□□□ -0.91
NUP43-201ENST00000340413 FOXO3O43524 673 aa9.39□□□□□ -0.91
NUP43-201ENST00000340413 BRPF1P55201 1214 aaPredicted RBP9.39□□□□□ -0.91
NUP43-201ENST00000340413 CHMP4AQ9BY43 222 aa9.39□□□□□ -0.91
NUP43-201ENST00000340413 IFT57Q9NWB7 429 aa9.39□□□□□ -0.91
NUP43-201ENST00000340413 CICQ96RK0 1608 aaPredicted RBP9.39□□□□□ -0.91
NUP43-201ENST00000340413 CACNA1FO60840 1977 aa9.39□□□□□ -0.91
NUP43-201ENST00000340413 KIAA0232Q92628 1395 aa9.38□□□□□ -0.91
NUP43-201ENST00000340413 APAF1O14727 1248 aa9.38□□□□□ -0.91
NUP43-201ENST00000340413 DUSP27Q5VZP5 1158 aa9.38□□□□□ -0.91
NUP43-201ENST00000340413 COL5A2P05997 1499 aaPredicted RBP9.38□□□□□ -0.91
NUP43-201ENST00000340413 PAPPAQ13219 1627 aa9.38□□□□□ -0.91
NUP43-201ENST00000340413 NUTM2FA1L443 756 aa9.37□□□□□ -0.91
NUP43-201ENST00000340413 PAK3O75914 559 aaPredicted RBP9.37□□□□□ -0.91
NUP43-201ENST00000340413 ZNF853P0CG23 659 aa9.37□□□□□ -0.91
NUP43-201ENST00000340413 RRS1Q15050 365 aaKnown RBP9.37□□□□□ -0.91
NUP43-201ENST00000340413 SHANK3Q9BYB0 1731 aa9.37□□□□□ -0.91
NUP43-201ENST00000340413 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
NUP43-201ENST00000340413 ERBB3P21860 1342 aa9.37□□□□□ -0.91
NUP43-201ENST00000340413 U2SURPO15042 1029 aaKnown RBP9.36□□□□□ -0.91
NUP43-201ENST00000340413 PRKAR2BP31323 418 aa9.36□□□□□ -0.91
NUP43-201ENST00000340413 TRIM35Q9UPQ4 493 aa9.36□□□□□ -0.91
NUP43-201ENST00000340413 GNAI1P63096 354 aa9.36□□□□□ -0.91
NUP43-201ENST00000340413 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.36□□□□□ -0.91
NUP43-201ENST00000340413 MAP3K5Q99683 1374 aa9.36□□□□□ -0.91
NUP43-201ENST00000340413 IBTKQ9P2D0 1353 aaPredicted RBP9.36□□□□□ -0.91
NUP43-201ENST00000340413 CRB1P82279 1406 aa9.36□□□□□ -0.91
NUP43-201ENST00000340413 CEMIPQ8WUJ3 1361 aa9.35□□□□□ -0.91
NUP43-201ENST00000340413 HSP90AB2PQ58FF8 381 aa9.35□□□□□ -0.91
NUP43-201ENST00000340413 EYA1Q99502 592 aa9.35□□□□□ -0.91
NUP43-201ENST00000340413 ZNF831Q5JPB2 1677 aa9.35□□□□□ -0.91
NUP43-201ENST00000340413 MS4A1P11836 297 aa9.35□□□□□ -0.91
NUP43-201ENST00000340413 ALDH1L2Q3SY69 923 aa9.35□□□□□ -0.91
NUP43-201ENST00000340413 NEFLP07196 543 aa9.34□□□□□ -0.91
NUP43-201ENST00000340413 WDR17Q8IZU2 1322 aa9.34□□□□□ -0.91
NUP43-201ENST00000340413 LAMB4A4D0S4 1761 aa9.34□□□□□ -0.91
NUP43-201ENST00000340413 PLEKHO1Q53GL0 409 aaPredicted RBP9.34□□□□□ -0.91
NUP43-201ENST00000340413 SPATA31A6Q5VVP1 1343 aa9.34□□□□□ -0.91
NUP43-201ENST00000340413 JCADQ9P266 1359 aa9.34□□□□□ -0.91
NUP43-201ENST00000340413 DISP2A7MBM2 1401 aa9.34□□□□□ -0.92
NUP43-201ENST00000340413 RIPK4P57078 832 aa9.33□□□□□ -0.92
NUP43-201ENST00000340413 CDCA7Q9BWT1 371 aaPredicted RBP9.33□□□□□ -0.92
NUP43-201ENST00000340413 ANKRD24Q8TF21 1146 aa9.33□□□□□ -0.92
NUP43-201ENST00000340413 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
NUP43-201ENST00000340413 RCAN3Q9UKA8 241 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms