RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TWISTNBQ3B726 338 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-202ENST00000340209 PDE3AQ14432 1141 aa12.95□□□□□ -0.34
RBFOX1-202ENST00000340209 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
RBFOX1-202ENST00000340209 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
RBFOX1-202ENST00000340209 REREQ9P2R6 1566 aa12.94□□□□□ -0.34
RBFOX1-202ENST00000340209 SETD1BQ9UPS6 1966 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-202ENST00000340209 GNAI1P63096 354 aa12.93□□□□□ -0.34
RBFOX1-202ENST00000340209 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
RBFOX1-202ENST00000340209 ATP7BP35670 1465 aa12.93□□□□□ -0.34
RBFOX1-202ENST00000340209 MVPQ14764 893 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-202ENST00000340209 BACH2Q9BYV9 841 aa12.93□□□□□ -0.34
RBFOX1-202ENST00000340209 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-202ENST00000340209 CCDC27Q2M243 656 aa12.93□□□□□ -0.34
RBFOX1-202ENST00000340209 SHPRHQ149N8 1683 aa12.93□□□□□ -0.34
RBFOX1-202ENST00000340209 IPO8O15397 1037 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-202ENST00000340209 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
RBFOX1-202ENST00000340209 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
RBFOX1-202ENST00000340209 NRXN3Q9Y4C0 1643 aa12.92□□□□□ -0.34
RBFOX1-202ENST00000340209 RWDD1Q9H446 243 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-202ENST00000340209 FAM135BQ49AJ0 1406 aa12.91□□□□□ -0.34
RBFOX1-202ENST00000340209 LRRC59Q96AG4 307 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-202ENST00000340209 IPO9Q96P70 1041 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-202ENST00000340209 CPSF1Q10570 1443 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-202ENST00000340209 LRRC7Q96NW7 1537 aa12.91□□□□□ -0.34
RBFOX1-202ENST00000340209 LMOD3Q0VAK6 560 aa12.91□□□□□ -0.34
RBFOX1-202ENST00000340209 EYA1Q99502 592 aa12.91□□□□□ -0.34
RBFOX1-202ENST00000340209 LNPKQ9C0E8 428 aa12.91□□□□□ -0.34
RBFOX1-202ENST00000340209 UBR1Q8IWV7 1749 aa12.9□□□□□ -0.34
RBFOX1-202ENST00000340209 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
RBFOX1-202ENST00000340209 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-202ENST00000340209 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.34
RBFOX1-202ENST00000340209 USP6P35125 1406 aa12.9□□□□□ -0.34
RBFOX1-202ENST00000340209 FER1L4A9Z1Z3 1794 aa12.9□□□□□ -0.34
RBFOX1-202ENST00000340209 KDM2BQ8NHM5 1336 aa12.9□□□□□ -0.34
RBFOX1-202ENST00000340209 MTHFSDQ2M296 383 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-202ENST00000340209 PHF23Q9BUL5 403 aaPredicted RBP12.9□□□□□ -0.34
RBFOX1-202ENST00000340209 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.35
RBFOX1-202ENST00000340209 MAP2P11137 1827 aaKnown RBP12.89□□□□□ -0.35
RBFOX1-202ENST00000340209 EIF2S2P20042 333 aaKnown RBP12.89□□□□□ -0.35
RBFOX1-202ENST00000340209 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
RBFOX1-202ENST00000340209 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
RBFOX1-202ENST00000340209 DLC1Q96QB1 1528 aa12.88□□□□□ -0.35
RBFOX1-202ENST00000340209 RIMS1Q86UR5 1692 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-202ENST00000340209 DDX19BQ9UMR2 479 aa12.88□□□□□ -0.35
RBFOX1-202ENST00000340209 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
RBFOX1-202ENST00000340209 C3P01024 1663 aa12.88□□□□□ -0.35
RBFOX1-202ENST00000340209 CSB-PGBD3P0DP91 1061 aa12.88□□□□□ -0.35
RBFOX1-202ENST00000340209 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
RBFOX1-202ENST00000340209 COL3A1P02461 1466 aaPredicted RBP12.87□□□□□ -0.35
RBFOX1-202ENST00000340209 F6X3S4 739 aa12.87□□□□□ -0.35
RBFOX1-202ENST00000340209 VAMP4O75379 141 aa12.87□□□□□ -0.35
RBFOX1-202ENST00000340209 MS4A1P11836 297 aa12.87□□□□□ -0.35
RBFOX1-202ENST00000340209 ANKRD45Q5TZF3 282 aa12.87□□□□□ -0.35
RBFOX1-202ENST00000340209 SIRT1Q96EB6 747 aa12.87□□□□□ -0.35
RBFOX1-202ENST00000340209 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
RBFOX1-202ENST00000340209 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
RBFOX1-202ENST00000340209 PNPLA6Q8IY17 1366 aa12.86□□□□□ -0.35
RBFOX1-202ENST00000340209 ATF3P18847 181 aa12.86□□□□□ -0.35
RBFOX1-202ENST00000340209 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
RBFOX1-202ENST00000340209 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
RBFOX1-202ENST00000340209 IFT57Q9NWB7 429 aa12.86□□□□□ -0.35
RBFOX1-202ENST00000340209 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.86□□□□□ -0.35
RBFOX1-202ENST00000340209 CDC42BPGQ6DT37 1551 aa12.85□□□□□ -0.35
RBFOX1-202ENST00000340209 HOXC9P31274 260 aa12.85□□□□□ -0.35
RBFOX1-202ENST00000340209 KIF20BQ96Q89 1820 aa12.84□□□□□ -0.35
RBFOX1-202ENST00000340209 A0A0G2JS52 829 aa12.84□□□□□ -0.35
RBFOX1-202ENST00000340209 CHRNA2Q15822 529 aa12.84□□□□□ -0.35
RBFOX1-202ENST00000340209 SEC24BO95487 1268 aa12.84□□□□□ -0.35
RBFOX1-202ENST00000340209 TECPR2O15040 1411 aa12.84□□□□□ -0.35
RBFOX1-202ENST00000340209 NLRP2Q9NX02 1062 aa12.83□□□□□ -0.35
RBFOX1-202ENST00000340209 USP32Q8NFA0 1604 aa12.83□□□□□ -0.35
RBFOX1-202ENST00000340209 FLT4P35916 1363 aa12.83□□□□□ -0.36
RBFOX1-202ENST00000340209 TTC21AQ8NDW8 1320 aa12.83□□□□□ -0.36
RBFOX1-202ENST00000340209 ANXA1P04083 346 aa12.83□□□□□ -0.36
RBFOX1-202ENST00000340209 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
RBFOX1-202ENST00000340209 MRPL50Q8N5N7 158 aaKnown RBP12.83□□□□□ -0.36
RBFOX1-202ENST00000340209 FKBP5Q13451 457 aaPredicted RBP12.82□□□□□ -0.36
RBFOX1-202ENST00000340209 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
RBFOX1-202ENST00000340209 UPF2Q9HAU5 1272 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-202ENST00000340209 IL16Q14005 1332 aa12.82□□□□□ -0.36
RBFOX1-202ENST00000340209 KRT28Q7Z3Y7 464 aa12.82□□□□□ -0.36
RBFOX1-202ENST00000340209 STK31Q9BXU1 1019 aa12.82□□□□□ -0.36
RBFOX1-202ENST00000340209 SETD1AO15047 1707 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-202ENST00000340209 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-202ENST00000340209 SLKQ9H2G2 1235 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-202ENST00000340209 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-202ENST00000340209 G2E3Q7L622 706 aa12.81□□□□□ -0.36
RBFOX1-202ENST00000340209 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
RBFOX1-202ENST00000340209 USP35Q9P2H5 1018 aa12.81□□□□□ -0.36
RBFOX1-202ENST00000340209 MED14O60244 1454 aa12.81□□□□□ -0.36
RBFOX1-202ENST00000340209 DIP2AQ14689 1571 aa12.8□□□□□ -0.36
RBFOX1-202ENST00000340209 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
RBFOX1-202ENST00000340209 GAS2L2Q8NHY3 880 aa12.8□□□□□ -0.36
RBFOX1-202ENST00000340209 NBPF4Q96M43 638 aa12.8□□□□□ -0.36
RBFOX1-202ENST00000340209 CEP170BQ9Y4F5 1589 aaPredicted RBP12.8□□□□□ -0.36
RBFOX1-202ENST00000340209 TEFQ10587 303 aa12.8□□□□□ -0.36
RBFOX1-202ENST00000340209 GNAT3A8MTJ3 354 aa12.79□□□□□ -0.36
RBFOX1-202ENST00000340209 CT47B1P0C2W7 299 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-202ENST00000340209 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
RBFOX1-202ENST00000340209 ITSN1Q15811 1721 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms