RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
ARHGEF3-202ENST00000338458 LRRC7Q96NW7 1537 aa13.07□□□□□ -0.32
ARHGEF3-202ENST00000338458 COG6Q9Y2V7 657 aa13.07□□□□□ -0.32
ARHGEF3-202ENST00000338458 RBM19Q9Y4C8 960 aaKnown RBP13.07□□□□□ -0.32
ARHGEF3-202ENST00000338458 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
ARHGEF3-202ENST00000338458 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
ARHGEF3-202ENST00000338458 TCERG1O14776 1098 aaKnown RBP13.06□□□□□ -0.32
ARHGEF3-202ENST00000338458 NFE2L2Q16236 605 aa13.06□□□□□ -0.32
ARHGEF3-202ENST00000338458 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
ARHGEF3-202ENST00000338458 TTC21AQ8NDW8 1320 aa13.05□□□□□ -0.32
ARHGEF3-202ENST00000338458 OVOS2A0A0J9YW53 1432 aa13.05□□□□□ -0.32
ARHGEF3-202ENST00000338458 OVOS2Q6IE36 1432 aa13.05□□□□□ -0.32
ARHGEF3-202ENST00000338458 CDK12Q9NYV4 1490 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF3-202ENST00000338458 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF3-202ENST00000338458 CHD2O14647 1828 aaKnown RBP13.04□□□□□ -0.32
ARHGEF3-202ENST00000338458 DDX17Q92841 729 aaKnown RBP13.04□□□□□ -0.32
ARHGEF3-202ENST00000338458 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
ARHGEF3-202ENST00000338458 SSH2Q76I76 1423 aa13.03□□□□□ -0.32
ARHGEF3-202ENST00000338458 NALCNQ8IZF0 1738 aa13.03□□□□□ -0.32
ARHGEF3-202ENST00000338458 USHBP1Q8N6Y0 703 aa13.02□□□□□ -0.32
ARHGEF3-202ENST00000338458 MCM10Q7L590 875 aa13.02□□□□□ -0.33
ARHGEF3-202ENST00000338458 NRKQ7Z2Y5 1582 aa13.02□□□□□ -0.33
ARHGEF3-202ENST00000338458 RLBP1P12271 317 aa13.02□□□□□ -0.33
ARHGEF3-202ENST00000338458 SSH1Q8WYL5 1049 aa13.01□□□□□ -0.33
ARHGEF3-202ENST00000338458 ANKARQ7Z5J8 1434 aa13.01□□□□□ -0.33
ARHGEF3-202ENST00000338458 ADGRL3Q9HAR2 1447 aa13.01□□□□□ -0.33
ARHGEF3-202ENST00000338458 EYA1Q99502 592 aa13□□□□□ -0.33
ARHGEF3-202ENST00000338458 FMN2Q9NZ56 1722 aa13□□□□□ -0.33
ARHGEF3-202ENST00000338458 USP31Q70CQ4 1352 aa13□□□□□ -0.33
ARHGEF3-202ENST00000338458 TSPYL6Q8N831 410 aa13□□□□□ -0.33
ARHGEF3-202ENST00000338458 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
ARHGEF3-202ENST00000338458 FTSJ3Q8IY81 847 aaKnown RBP12.99□□□□□ -0.33
ARHGEF3-202ENST00000338458 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
ARHGEF3-202ENST00000338458 FLT4P35916 1363 aa12.99□□□□□ -0.33
ARHGEF3-202ENST00000338458 ATF3P18847 181 aa12.99□□□□□ -0.33
ARHGEF3-202ENST00000338458 HOXC9P31274 260 aa12.99□□□□□ -0.33
ARHGEF3-202ENST00000338458 PIK3C2AO00443 1686 aa12.98□□□□□ -0.33
ARHGEF3-202ENST00000338458 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
ARHGEF3-202ENST00000338458 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
ARHGEF3-202ENST00000338458 SBNO1A3KN83 1393 aa12.98□□□□□ -0.33
ARHGEF3-202ENST00000338458 KRT24Q2M2I5 525 aa12.98□□□□□ -0.33
ARHGEF3-202ENST00000338458 C19orf44Q9H6X5 657 aa12.98□□□□□ -0.33
ARHGEF3-202ENST00000338458 TMEM94Q12767 1356 aa12.97□□□□□ -0.33
ARHGEF3-202ENST00000338458 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
ARHGEF3-202ENST00000338458 KRT28Q7Z3Y7 464 aa12.97□□□□□ -0.33
ARHGEF3-202ENST00000338458 RGS3P49796 1198 aa12.96□□□□□ -0.33
ARHGEF3-202ENST00000338458 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
ARHGEF3-202ENST00000338458 ZKSCAN2Q63HK3 967 aa12.96□□□□□ -0.33
ARHGEF3-202ENST00000338458 PDE3AQ14432 1141 aa12.96□□□□□ -0.33
ARHGEF3-202ENST00000338458 GNAI1P63096 354 aa12.96□□□□□ -0.34
ARHGEF3-202ENST00000338458 IL16Q14005 1332 aa12.96□□□□□ -0.34
ARHGEF3-202ENST00000338458 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
ARHGEF3-202ENST00000338458 C8orf58Q8NAV2 365 aa12.95□□□□□ -0.34
ARHGEF3-202ENST00000338458 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
ARHGEF3-202ENST00000338458 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
ARHGEF3-202ENST00000338458 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
ARHGEF3-202ENST00000338458 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
ARHGEF3-202ENST00000338458 IGHDP01880 384 aa12.94□□□□□ -0.34
ARHGEF3-202ENST00000338458 TRIM27P14373 513 aa12.94□□□□□ -0.34
ARHGEF3-202ENST00000338458 DZIP1LQ8IYY4 767 aaKnown RBP12.94□□□□□ -0.34
ARHGEF3-202ENST00000338458 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
ARHGEF3-202ENST00000338458 RTF1Q92541 710 aaKnown RBP12.94□□□□□ -0.34
ARHGEF3-202ENST00000338458 CABLES1Q8TDN4 633 aa12.94□□□□□ -0.34
ARHGEF3-202ENST00000338458 GCP02774 474 aa12.93□□□□□ -0.34
ARHGEF3-202ENST00000338458 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF3-202ENST00000338458 IFT57Q9NWB7 429 aa12.93□□□□□ -0.34
ARHGEF3-202ENST00000338458 CFAP44Q96MT7 982 aa12.93□□□□□ -0.34
ARHGEF3-202ENST00000338458 DLG5Q8TDM6 1919 aa12.93□□□□□ -0.34
ARHGEF3-202ENST00000338458 VAMP4O75379 141 aa12.92□□□□□ -0.34
ARHGEF3-202ENST00000338458 NBPF6Q5VWK0 638 aa12.92□□□□□ -0.34
ARHGEF3-202ENST00000338458 ATF7IPQ6VMQ6 1270 aa12.92□□□□□ -0.34
ARHGEF3-202ENST00000338458 NPM2Q86SE8 214 aaKnown RBP12.92□□□□□ -0.34
ARHGEF3-202ENST00000338458 NBPF4Q96M43 638 aa12.92□□□□□ -0.34
ARHGEF3-202ENST00000338458 CENPQQ7L2Z9 268 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF3-202ENST00000338458 PCDHB15Q9Y5E8 787 aa12.91□□□□□ -0.34
ARHGEF3-202ENST00000338458 IGSF1Q8N6C5 1336 aa12.91□□□□□ -0.34
ARHGEF3-202ENST00000338458 TMEM57Q8N5G2 664 aa12.91□□□□□ -0.34
ARHGEF3-202ENST00000338458 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
ARHGEF3-202ENST00000338458 KDM2BQ8NHM5 1336 aa12.91□□□□□ -0.34
ARHGEF3-202ENST00000338458 ZNF335Q9H4Z2 1342 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF3-202ENST00000338458 BCL11AQ9H165 835 aa12.9□□□□□ -0.34
ARHGEF3-202ENST00000338458 ZNF853P0CG23 659 aa12.9□□□□□ -0.34
ARHGEF3-202ENST00000338458 MVPQ14764 893 aaKnown RBP12.9□□□□□ -0.34
ARHGEF3-202ENST00000338458 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF3-202ENST00000338458 IP6K1Q92551 441 aa12.9□□□□□ -0.34
ARHGEF3-202ENST00000338458 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
ARHGEF3-202ENST00000338458 ARHGEF10O15013 1369 aa12.9□□□□□ -0.35
ARHGEF3-202ENST00000338458 KCNH5Q8NCM2 988 aa12.89□□□□□ -0.35
ARHGEF3-202ENST00000338458 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
ARHGEF3-202ENST00000338458 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
ARHGEF3-202ENST00000338458 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
ARHGEF3-202ENST00000338458 CHRNA2Q15822 529 aa12.88□□□□□ -0.35
ARHGEF3-202ENST00000338458 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
ARHGEF3-202ENST00000338458 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
ARHGEF3-202ENST00000338458 STRCP1A6NGW2 1772 aa12.87□□□□□ -0.35
ARHGEF3-202ENST00000338458 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
ARHGEF3-202ENST00000338458 PDE4AP27815 886 aa12.87□□□□□ -0.35
ARHGEF3-202ENST00000338458 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
ARHGEF3-202ENST00000338458 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
ARHGEF3-202ENST00000338458 MARF1Q9Y4F3 1742 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms