RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 ZNF692Q9BU19 519 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF1-201ENST00000337665 ZNF853P0CG23 659 aa18.38■□□□□ 0.53
ARHGEF1-201ENST00000337665 HMOX1P09601 288 aa18.38■□□□□ 0.53
ARHGEF1-201ENST00000337665 COG3Q96JB2 828 aa18.38■□□□□ 0.53
ARHGEF1-201ENST00000337665 SLC4A3P48751 1232 aa18.38■□□□□ 0.53
ARHGEF1-201ENST00000337665 RGPD1P0DJD0 1748 aa18.38■□□□□ 0.53
ARHGEF1-201ENST00000337665 ZBTB40Q9NUA8 1239 aa18.37■□□□□ 0.53
ARHGEF1-201ENST00000337665 TMEM57Q8N5G2 664 aa18.37■□□□□ 0.53
ARHGEF1-201ENST00000337665 PEAK1Q9H792 1746 aa18.36■□□□□ 0.53
ARHGEF1-201ENST00000337665 IPO8O15397 1037 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-201ENST00000337665 PTPRUQ92729 1446 aa18.36■□□□□ 0.53
ARHGEF1-201ENST00000337665 NEFMP07197 916 aa18.36■□□□□ 0.53
ARHGEF1-201ENST00000337665 LTKP29376 864 aa18.36■□□□□ 0.53
ARHGEF1-201ENST00000337665 ITPRIPQ8IWB1 547 aa18.36■□□□□ 0.53
ARHGEF1-201ENST00000337665 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
ARHGEF1-201ENST00000337665 SLIT1O75093 1534 aa18.36■□□□□ 0.53
ARHGEF1-201ENST00000337665 OVOS2A0A0J9YW53 1432 aa18.35■□□□□ 0.53
ARHGEF1-201ENST00000337665 OVOS2Q6IE36 1432 aa18.35■□□□□ 0.53
ARHGEF1-201ENST00000337665 PIK3R4Q99570 1358 aa18.35■□□□□ 0.53
ARHGEF1-201ENST00000337665 VAMP4O75379 141 aa18.35■□□□□ 0.53
ARHGEF1-201ENST00000337665 CALD1Q05682 793 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-201ENST00000337665 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
ARHGEF1-201ENST00000337665 ARHGAP23Q9P227 1491 aa18.34■□□□□ 0.53
ARHGEF1-201ENST00000337665 RRS1Q15050 365 aaKnown RBP18.34■□□□□ 0.53
ARHGEF1-201ENST00000337665 PLEKHG3A1L390 1219 aa18.34■□□□□ 0.53
ARHGEF1-201ENST00000337665 SMC5Q8IY18 1101 aa18.34■□□□□ 0.53
ARHGEF1-201ENST00000337665 SSH2Q76I76 1423 aa18.33■□□□□ 0.52
ARHGEF1-201ENST00000337665 GNAI1P63096 354 aa18.33■□□□□ 0.52
ARHGEF1-201ENST00000337665 MRPL50Q8N5N7 158 aaKnown RBP18.33■□□□□ 0.52
ARHGEF1-201ENST00000337665 THUMPD2Q9BTF0 503 aaKnown RBP18.33■□□□□ 0.52
ARHGEF1-201ENST00000337665 RIMS1Q86UR5 1692 aaKnown RBP18.32■□□□□ 0.52
ARHGEF1-201ENST00000337665 TTC21BQ7Z4L5 1316 aa18.32■□□□□ 0.52
ARHGEF1-201ENST00000337665 ARHGAP45Q92619 1136 aa18.32■□□□□ 0.52
ARHGEF1-201ENST00000337665 USP6P35125 1406 aa18.32■□□□□ 0.52
ARHGEF1-201ENST00000337665 FMN2Q9NZ56 1722 aa18.32■□□□□ 0.52
ARHGEF1-201ENST00000337665 MBIPQ9NS73 344 aa18.32■□□□□ 0.52
ARHGEF1-201ENST00000337665 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
ARHGEF1-201ENST00000337665 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF1-201ENST00000337665 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
ARHGEF1-201ENST00000337665 ACEP12821 1306 aa18.3■□□□□ 0.52
ARHGEF1-201ENST00000337665 CFAP44Q96MT7 982 aa18.3■□□□□ 0.52
ARHGEF1-201ENST00000337665 RGPD8O14715 1765 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF1-201ENST00000337665 LMOD3Q0VAK6 560 aa18.29■□□□□ 0.52
ARHGEF1-201ENST00000337665 FER1L4A9Z1Z3 1794 aa18.29■□□□□ 0.52
ARHGEF1-201ENST00000337665 TBC1D32Q96NH3 1257 aa18.29■□□□□ 0.52
ARHGEF1-201ENST00000337665 DIP2AQ14689 1571 aa18.28■□□□□ 0.52
ARHGEF1-201ENST00000337665 NFKBIBQ15653 356 aa18.28■□□□□ 0.52
ARHGEF1-201ENST00000337665 EIF4A2Q14240 407 aaKnown RBP18.28■□□□□ 0.52
ARHGEF1-201ENST00000337665 ZBTB7BO15156 539 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF1-201ENST00000337665 XRN1Q8IZH2 1706 aaKnown RBP18.27■□□□□ 0.52
ARHGEF1-201ENST00000337665 ABCC4O15439 1325 aa18.27■□□□□ 0.51
ARHGEF1-201ENST00000337665 NUCB1Q02818 461 aa18.26■□□□□ 0.51
ARHGEF1-201ENST00000337665 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
ARHGEF1-201ENST00000337665 CEBPAP49715 358 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF1-201ENST00000337665 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
ARHGEF1-201ENST00000337665 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
ARHGEF1-201ENST00000337665 MARF1Q9Y4F3 1742 aaKnown RBP18.24■□□□□ 0.51
ARHGEF1-201ENST00000337665 AEBP1Q8IUX7 1158 aa18.23■□□□□ 0.51
ARHGEF1-201ENST00000337665 TBX22Q9Y458 520 aa18.23■□□□□ 0.51
ARHGEF1-201ENST00000337665 PIK3C2AO00443 1686 aa18.23■□□□□ 0.51
ARHGEF1-201ENST00000337665 USP54Q70EL1 1684 aa18.23■□□□□ 0.51
ARHGEF1-201ENST00000337665 SLC26A8Q96RN1 970 aa18.22■□□□□ 0.51
ARHGEF1-201ENST00000337665 EID1Q9Y6B2 187 aa18.22■□□□□ 0.51
ARHGEF1-201ENST00000337665 KIF24Q5T7B8 1368 aa18.21■□□□□ 0.51
ARHGEF1-201ENST00000337665 SULT6B1Q6IMI4 303 aa18.21■□□□□ 0.51
ARHGEF1-201ENST00000337665 CHMP4BQ9H444 224 aaKnown RBP18.21■□□□□ 0.51
ARHGEF1-201ENST00000337665 UPF2Q9HAU5 1272 aaKnown RBP18.21■□□□□ 0.51
ARHGEF1-201ENST00000337665 AMOTL2Q9Y2J4 779 aa18.21■□□□□ 0.51
ARHGEF1-201ENST00000337665 TTC21AQ8NDW8 1320 aa18.21■□□□□ 0.51
ARHGEF1-201ENST00000337665 DCTN1Q14203 1278 aa18.21■□□□□ 0.51
ARHGEF1-201ENST00000337665 BECN1Q14457 450 aa18.2■□□□□ 0.5
ARHGEF1-201ENST00000337665 ELL2O00472 640 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF1-201ENST00000337665 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
ARHGEF1-201ENST00000337665 CHL1O00533 1208 aa18.19■□□□□ 0.5
ARHGEF1-201ENST00000337665 HSP90AB2PQ58FF8 381 aa18.19■□□□□ 0.5
ARHGEF1-201ENST00000337665 CHD1LQ86WJ1 897 aa18.19■□□□□ 0.5
ARHGEF1-201ENST00000337665 CRB1P82279 1406 aa18.18■□□□□ 0.5
ARHGEF1-201ENST00000337665 NUTM2FA1L443 756 aa18.18■□□□□ 0.5
ARHGEF1-201ENST00000337665 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
ARHGEF1-201ENST00000337665 RGS12O14924 1447 aa18.18■□□□□ 0.5
ARHGEF1-201ENST00000337665 KIAA0232Q92628 1395 aa18.18■□□□□ 0.5
ARHGEF1-201ENST00000337665 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
ARHGEF1-201ENST00000337665 ANTXR1Q9H6X2 564 aa18.17■□□□□ 0.5
ARHGEF1-201ENST00000337665 API5Q9BZZ5 524 aaKnown RBP18.17■□□□□ 0.5
ARHGEF1-201ENST00000337665 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
ARHGEF1-201ENST00000337665 TBC1D2Q9BYX2 928 aa18.16■□□□□ 0.5
ARHGEF1-201ENST00000337665 KDRP35968 1356 aa18.15■□□□□ 0.5
ARHGEF1-201ENST00000337665 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
ARHGEF1-201ENST00000337665 LRRC37A3O60309 1634 aa18.15■□□□□ 0.5
ARHGEF1-201ENST00000337665 ANKARQ7Z5J8 1434 aa18.15■□□□□ 0.5
ARHGEF1-201ENST00000337665 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF1-201ENST00000337665 C22orf23Q9BZE7 217 aa18.14■□□□□ 0.49
ARHGEF1-201ENST00000337665 LNPKQ9C0E8 428 aa18.14■□□□□ 0.49
ARHGEF1-201ENST00000337665 C1orf115Q9H7X2 142 aa18.14■□□□□ 0.49
ARHGEF1-201ENST00000337665 INTS3Q68E01 1043 aaKnown RBP18.14■□□□□ 0.49
ARHGEF1-201ENST00000337665 THEMISQ8N1K5 641 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF1-201ENST00000337665 FLT4P35916 1363 aa18.13■□□□□ 0.49
ARHGEF1-201ENST00000337665 MCM10Q7L590 875 aa18.13■□□□□ 0.49
ARHGEF1-201ENST00000337665 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
ARHGEF1-201ENST00000337665 BMP2KLQ5H9B9 411 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms