RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 RBM10P98175 930 aaKnown RBP16.41■□□□□ 0.22
RTN4-202ENST00000337526 ATP2B1P20020 1258 aa16.41■□□□□ 0.22
RTN4-202ENST00000337526 KRT85P78386 507 aa16.41■□□□□ 0.22
RTN4-202ENST00000337526 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
RTN4-202ENST00000337526 SRGAP3O43295 1099 aa16.41■□□□□ 0.22
RTN4-202ENST00000337526 LARP1BQ659C4 914 aaKnown RBP16.41■□□□□ 0.22
RTN4-202ENST00000337526 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
RTN4-202ENST00000337526 AEBP1Q8IUX7 1158 aa16.4■□□□□ 0.22
RTN4-202ENST00000337526 MAP4K4O95819 1239 aaPredicted RBP16.4■□□□□ 0.22
RTN4-202ENST00000337526 ATF3P18847 181 aa16.4■□□□□ 0.22
RTN4-202ENST00000337526 STK38Q15208 465 aa16.4■□□□□ 0.22
RTN4-202ENST00000337526 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
RTN4-202ENST00000337526 GPRASP1Q5JY77 1395 aa16.4■□□□□ 0.22
RTN4-202ENST00000337526 SMC2O95347 1197 aa16.39■□□□□ 0.22
RTN4-202ENST00000337526 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
RTN4-202ENST00000337526 XBP1P17861 261 aa16.39■□□□□ 0.21
RTN4-202ENST00000337526 ANKRD1Q15327 319 aa16.39■□□□□ 0.21
RTN4-202ENST00000337526 KDM4AO75164 1064 aa16.39■□□□□ 0.21
RTN4-202ENST00000337526 STK3Q13188 491 aa16.39■□□□□ 0.21
RTN4-202ENST00000337526 ZNF396Q96N95 335 aaPredicted RBP16.39■□□□□ 0.21
RTN4-202ENST00000337526 RTEL1-TNFRSF6BF6WH68 1400 aa16.39■□□□□ 0.21
RTN4-202ENST00000337526 SIL1Q9H173 461 aa16.39■□□□□ 0.21
RTN4-202ENST00000337526 HSP90B2PQ58FF3 399 aa16.38■□□□□ 0.21
RTN4-202ENST00000337526 ESCO1Q5FWF5 840 aa16.38■□□□□ 0.21
RTN4-202ENST00000337526 TBC1D2BQ9UPU7 963 aa16.38■□□□□ 0.21
RTN4-202ENST00000337526 ABCC5O15440 1437 aa16.38■□□□□ 0.21
RTN4-202ENST00000337526 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
RTN4-202ENST00000337526 EXOC6BQ9Y2D4 811 aa16.38■□□□□ 0.21
RTN4-202ENST00000337526 SART3Q15020 963 aaKnown RBP16.38■□□□□ 0.21
RTN4-202ENST00000337526 TNMDQ9H2S6 317 aa16.38■□□□□ 0.21
RTN4-202ENST00000337526 ZNF530Q6P9A1 599 aaPredicted RBP16.37■□□□□ 0.21
RTN4-202ENST00000337526 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
RTN4-202ENST00000337526 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
RTN4-202ENST00000337526 BRMS1Q9HCU9 246 aa16.37■□□□□ 0.21
RTN4-202ENST00000337526 CCDC61Q9Y6R9 512 aa16.37■□□□□ 0.21
RTN4-202ENST00000337526 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
RTN4-202ENST00000337526 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
RTN4-202ENST00000337526 TBC1D2Q9BYX2 928 aa16.36■□□□□ 0.21
RTN4-202ENST00000337526 PCF11O94913 1555 aaKnown RBP16.36■□□□□ 0.21
RTN4-202ENST00000337526 CWC27Q6UX04 472 aaKnown RBP16.36■□□□□ 0.21
RTN4-202ENST00000337526 FYB1O15117 783 aa16.36■□□□□ 0.21
RTN4-202ENST00000337526 ACBD3Q9H3P7 528 aa16.36■□□□□ 0.21
RTN4-202ENST00000337526 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
RTN4-202ENST00000337526 ME1P48163 572 aa16.35■□□□□ 0.21
RTN4-202ENST00000337526 NAP1L1P55209 391 aaKnown RBP16.35■□□□□ 0.21
RTN4-202ENST00000337526 JAKMIP1Q96N16 626 aaKnown RBP16.35■□□□□ 0.21
RTN4-202ENST00000337526 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
RTN4-202ENST00000337526 AACSQ86V21 672 aa16.34■□□□□ 0.21
RTN4-202ENST00000337526 UPF3BQ9BZI7 483 aaKnown RBP16.34■□□□□ 0.21
RTN4-202ENST00000337526 RPRD2Q5VT52 1461 aaKnown RBP16.34■□□□□ 0.21
RTN4-202ENST00000337526 JMYQ8N9B5 988 aa16.34■□□□□ 0.21
RTN4-202ENST00000337526 ZSCAN30Q86W11 494 aa16.34■□□□□ 0.21
RTN4-202ENST00000337526 TRIM34Q9BYJ4 488 aa16.34■□□□□ 0.21
RTN4-202ENST00000337526 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
RTN4-202ENST00000337526 ZSCAN31Q96LW9 406 aaPredicted RBP16.33■□□□□ 0.21
RTN4-202ENST00000337526 CCDC158Q5M9N0 1113 aa16.33■□□□□ 0.2
RTN4-202ENST00000337526 RUFY1Q96T51 708 aa16.33■□□□□ 0.2
RTN4-202ENST00000337526 SYCE3A1L190 88 aa16.33■□□□□ 0.2
RTN4-202ENST00000337526 DCTN1Q14203 1278 aa16.33■□□□□ 0.2
RTN4-202ENST00000337526 TTLL5Q6EMB2 1281 aa16.33■□□□□ 0.2
RTN4-202ENST00000337526 SLC26A8Q96RN1 970 aa16.33■□□□□ 0.2
RTN4-202ENST00000337526 RRP12Q5JTH9 1297 aaKnown RBP16.32■□□□□ 0.2
RTN4-202ENST00000337526 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
RTN4-202ENST00000337526 TRIM27P14373 513 aa16.32■□□□□ 0.2
RTN4-202ENST00000337526 SPATA32Q96LK8 384 aa16.32■□□□□ 0.2
RTN4-202ENST00000337526 ARHGEF11O15085 1522 aa16.32■□□□□ 0.2
RTN4-202ENST00000337526 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
RTN4-202ENST00000337526 ABCC11Q96J66 1382 aa16.31■□□□□ 0.2
RTN4-202ENST00000337526 CCDC141Q6ZP82 1450 aa16.31■□□□□ 0.2
RTN4-202ENST00000337526 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
RTN4-202ENST00000337526 NUDT16Q96DE0 195 aaKnown RBP16.31■□□□□ 0.2
RTN4-202ENST00000337526 PTPN23Q9H3S7 1636 aa16.31■□□□□ 0.2
RTN4-202ENST00000337526 FAM177BA6PVY3 158 aa16.31■□□□□ 0.2
RTN4-202ENST00000337526 OFD1O75665 1012 aa16.31■□□□□ 0.2
RTN4-202ENST00000337526 FILIP1LQ4L180 1135 aa16.31■□□□□ 0.2
RTN4-202ENST00000337526 MCM10Q7L590 875 aa16.31■□□□□ 0.2
RTN4-202ENST00000337526 MTMR7Q9Y216 660 aa16.31■□□□□ 0.2
RTN4-202ENST00000337526 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
RTN4-202ENST00000337526 CCP110O43303 1012 aa16.3■□□□□ 0.2
RTN4-202ENST00000337526 SMARCA5O60264 1052 aaPredicted RBP16.3■□□□□ 0.2
RTN4-202ENST00000337526 SERPINC1P01008 464 aa16.3■□□□□ 0.2
RTN4-202ENST00000337526 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
RTN4-202ENST00000337526 NUTM1Q86Y26 1132 aa16.3■□□□□ 0.2
RTN4-202ENST00000337526 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
RTN4-202ENST00000337526 MYL6BP14649 208 aa16.3■□□□□ 0.2
RTN4-202ENST00000337526 MX1P20591 662 aa16.3■□□□□ 0.2
RTN4-202ENST00000337526 AK7Q96M32 723 aa16.3■□□□□ 0.2
RTN4-202ENST00000337526 TCEAL9Q9UHQ7 104 aa16.3■□□□□ 0.2
RTN4-202ENST00000337526 CFAP45Q9UL16 551 aa16.3■□□□□ 0.2
RTN4-202ENST00000337526 UQCRHLA0A096LP55 91 aa16.29■□□□□ 0.2
RTN4-202ENST00000337526 UQCRHP07919 91 aa16.29■□□□□ 0.2
RTN4-202ENST00000337526 BRPF1P55201 1214 aaPredicted RBP16.29■□□□□ 0.2
RTN4-202ENST00000337526 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
RTN4-202ENST00000337526 TTC39AQ5SRH9 613 aa16.29■□□□□ 0.2
RTN4-202ENST00000337526 CNNM1Q9NRU3 951 aa16.29■□□□□ 0.2
RTN4-202ENST00000337526 IGHDP01880 384 aa16.29■□□□□ 0.2
RTN4-202ENST00000337526 THEMISQ8N1K5 641 aaPredicted RBP16.29■□□□□ 0.2
RTN4-202ENST00000337526 KIF1BPQ96EK5 621 aa16.29■□□□□ 0.2
RTN4-202ENST00000337526 PDIA4P13667 645 aaKnown RBP16.28■□□□□ 0.2
RTN4-202ENST00000337526 FERMT3Q86UX7 667 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms