RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 TAF3Q5VWG9 929 aa13.45□□□□□ -0.26
LRAT-201ENST00000336356 DDX19BQ9UMR2 479 aa13.45□□□□□ -0.26
LRAT-201ENST00000336356 G3V3G9 751 aa13.45□□□□□ -0.26
LRAT-201ENST00000336356 DIAPH1O60610 1272 aaKnown RBP13.45□□□□□ -0.26
LRAT-201ENST00000336356 DCAF8Q5TAQ9 597 aa13.45□□□□□ -0.26
LRAT-201ENST00000336356 CCDC66A2RUB6 948 aa13.45□□□□□ -0.26
LRAT-201ENST00000336356 XRCC6P12956 609 aaKnown RBP eCLIP13.45□□□□□ -0.26
LRAT-201ENST00000336356 ZC3H6P61129 1189 aaKnown RBP13.44□□□□□ -0.26
LRAT-201ENST00000336356 GAS2L2Q8NHY3 880 aa13.44□□□□□ -0.26
LRAT-201ENST00000336356 KDM5CP41229 1560 aa13.44□□□□□ -0.26
LRAT-201ENST00000336356 XPCQ01831 940 aaPredicted RBP13.44□□□□□ -0.26
LRAT-201ENST00000336356 ADAMTS8Q9UP79 889 aa13.44□□□□□ -0.26
LRAT-201ENST00000336356 USP21Q9UK80 565 aa13.44□□□□□ -0.26
LRAT-201ENST00000336356 STK31Q9BXU1 1019 aa13.44□□□□□ -0.26
LRAT-201ENST00000336356 ZNF330Q9Y3S2 320 aaPredicted RBP13.43□□□□□ -0.26
LRAT-201ENST00000336356 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
LRAT-201ENST00000336356 LTKP29376 864 aa13.43□□□□□ -0.26
LRAT-201ENST00000336356 SPATA31A6Q5VVP1 1343 aa13.43□□□□□ -0.26
LRAT-201ENST00000336356 RNF123Q5XPI4 1314 aa13.43□□□□□ -0.26
LRAT-201ENST00000336356 ABCC3O15438 1527 aa13.43□□□□□ -0.26
LRAT-201ENST00000336356 MCTP1Q6DN14 999 aa13.43□□□□□ -0.26
LRAT-201ENST00000336356 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
LRAT-201ENST00000336356 JCADQ9P266 1359 aa13.42□□□□□ -0.26
LRAT-201ENST00000336356 HTATSF1O43719 755 aaKnown RBP13.42□□□□□ -0.26
LRAT-201ENST00000336356 DZIP1LQ8IYY4 767 aaKnown RBP13.42□□□□□ -0.26
LRAT-201ENST00000336356 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
LRAT-201ENST00000336356 MBD3O95983 291 aa13.42□□□□□ -0.26
LRAT-201ENST00000336356 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
LRAT-201ENST00000336356 ABCC11Q96J66 1382 aa13.41□□□□□ -0.26
LRAT-201ENST00000336356 EIF2AK4Q9P2K8 1649 aaKnown RBP13.41□□□□□ -0.26
LRAT-201ENST00000336356 PLA2R1Q13018 1463 aa13.41□□□□□ -0.26
LRAT-201ENST00000336356 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
LRAT-201ENST00000336356 RRAGDQ9NQL2 400 aaPredicted RBP13.41□□□□□ -0.26
LRAT-201ENST00000336356 RIMS1Q86UR5 1692 aaKnown RBP13.41□□□□□ -0.26
LRAT-201ENST00000336356 TPM3P06753 285 aa13.41□□□□□ -0.26
LRAT-201ENST00000336356 RBM33Q96EV2 1170 aaKnown RBP13.41□□□□□ -0.26
LRAT-201ENST00000336356 CAVIN1Q6NZI2 390 aaKnown RBP13.4□□□□□ -0.26
LRAT-201ENST00000336356 SMARCC1Q92922 1105 aaPredicted RBP13.4□□□□□ -0.26
LRAT-201ENST00000336356 BCL2L13Q9BXK5 485 aa13.4□□□□□ -0.26
LRAT-201ENST00000336356 NCOA3Q9Y6Q9 1424 aa13.4□□□□□ -0.27
LRAT-201ENST00000336356 AMOTQ4VCS5 1084 aa13.39□□□□□ -0.27
LRAT-201ENST00000336356 ATP6V1DQ9Y5K8 247 aa13.39□□□□□ -0.27
LRAT-201ENST00000336356 ANKRD45Q5TZF3 282 aa13.39□□□□□ -0.27
LRAT-201ENST00000336356 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
LRAT-201ENST00000336356 YTHDC2Q9H6S0 1430 aaKnown RBP13.39□□□□□ -0.27
LRAT-201ENST00000336356 SASS6Q6UVJ0 657 aa13.38□□□□□ -0.27
LRAT-201ENST00000336356 DYNC1I1O14576 645 aa13.38□□□□□ -0.27
LRAT-201ENST00000336356 MCM5P33992 734 aa13.38□□□□□ -0.27
LRAT-201ENST00000336356 SKAP1Q86WV1 359 aa13.38□□□□□ -0.27
LRAT-201ENST00000336356 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
LRAT-201ENST00000336356 POLD1P28340 1107 aa13.37□□□□□ -0.27
LRAT-201ENST00000336356 DDB1Q16531 1140 aa13.37□□□□□ -0.27
LRAT-201ENST00000336356 CPS1P31327 1500 aa13.37□□□□□ -0.27
LRAT-201ENST00000336356 REC8O95072 547 aa13.37□□□□□ -0.27
LRAT-201ENST00000336356 ACEP12821 1306 aa13.37□□□□□ -0.27
LRAT-201ENST00000336356 DDX54Q8TDD1 881 aaKnown RBP13.36□□□□□ -0.27
LRAT-201ENST00000336356 QTRT2Q9H974 415 aaKnown RBP13.36□□□□□ -0.27
LRAT-201ENST00000336356 CABP4P57796 275 aa13.36□□□□□ -0.27
LRAT-201ENST00000336356 C8orf34Q49A92 452 aa13.36□□□□□ -0.27
LRAT-201ENST00000336356 TEX35Q5T0J7 233 aa13.36□□□□□ -0.27
LRAT-201ENST00000336356 CDC42BPAQ5VT25 1732 aa13.35□□□□□ -0.27
LRAT-201ENST00000336356 PIK3C2GO75747 1445 aa13.35□□□□□ -0.27
LRAT-201ENST00000336356 C20orf194Q5TEA3 1177 aa13.35□□□□□ -0.27
LRAT-201ENST00000336356 REREQ9P2R6 1566 aa13.35□□□□□ -0.27
LRAT-201ENST00000336356 DDX58O95786 925 aaKnown RBP13.35□□□□□ -0.27
LRAT-201ENST00000336356 FOXD4L5Q5VV16 416 aaPredicted RBP13.35□□□□□ -0.27
LRAT-201ENST00000336356 FOXD4L4Q8WXT5 416 aaPredicted RBP13.35□□□□□ -0.27
LRAT-201ENST00000336356 GGNBP2Q9H3C7 697 aa13.34□□□□□ -0.27
LRAT-201ENST00000336356 K7ELQ4 463 aaPredicted RBP13.34□□□□□ -0.27
LRAT-201ENST00000336356 PANK2Q9BZ23 570 aa13.34□□□□□ -0.27
LRAT-201ENST00000336356 RRP7AQ9Y3A4 280 aaKnown RBP13.34□□□□□ -0.27
LRAT-201ENST00000336356 COL17A1Q9UMD9 1497 aaPredicted RBP13.34□□□□□ -0.27
LRAT-201ENST00000336356 HMMRO75330 724 aa13.34□□□□□ -0.27
LRAT-201ENST00000336356 BCAR3O75815 825 aa13.34□□□□□ -0.27
LRAT-201ENST00000336356 CWC22Q9HCG8 908 aaKnown RBP13.34□□□□□ -0.27
LRAT-201ENST00000336356 STK32BQ9NY57 414 aa13.34□□□□□ -0.27
LRAT-201ENST00000336356 RBM6P78332 1123 aaKnown RBP13.34□□□□□ -0.27
LRAT-201ENST00000336356 RNF214Q8ND24 703 aa13.34□□□□□ -0.27
LRAT-201ENST00000336356 KIF3AQ9Y496 699 aa13.34□□□□□ -0.27
LRAT-201ENST00000336356 ZC3H13Q5T200 1668 aaKnown RBP13.33□□□□□ -0.28
LRAT-201ENST00000336356 CAMSAP1Q5T5Y3 1602 aa13.33□□□□□ -0.28
LRAT-201ENST00000336356 RABEP1Q15276 862 aa13.33□□□□□ -0.28
LRAT-201ENST00000336356 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
LRAT-201ENST00000336356 TBC1D32Q96NH3 1257 aa13.33□□□□□ -0.28
LRAT-201ENST00000336356 TSPY26PQ9H489 355 aa13.33□□□□□ -0.28
LRAT-201ENST00000336356 KCNJ4P48050 445 aa13.33□□□□□ -0.28
LRAT-201ENST00000336356 NSD2O96028 1365 aa13.33□□□□□ -0.28
LRAT-201ENST00000336356 PPP2R1AP30153 589 aa13.33□□□□□ -0.28
LRAT-201ENST00000336356 TTC21BQ7Z4L5 1316 aa13.33□□□□□ -0.28
LRAT-201ENST00000336356 GPS2Q13227 327 aa13.32□□□□□ -0.28
LRAT-201ENST00000336356 RUNDC1Q96C34 613 aa13.32□□□□□ -0.28
LRAT-201ENST00000336356 SLFN5Q08AF3 891 aa13.32□□□□□ -0.28
LRAT-201ENST00000336356 LNPKQ9C0E8 428 aa13.32□□□□□ -0.28
LRAT-201ENST00000336356 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
LRAT-201ENST00000336356 CDC45O75419 566 aa13.32□□□□□ -0.28
LRAT-201ENST00000336356 NEXNQ0ZGT2 675 aa13.32□□□□□ -0.28
LRAT-201ENST00000336356 TEX13AQ9BXU3 409 aaPredicted RBP13.32□□□□□ -0.28
LRAT-201ENST00000336356 OFD1O75665 1012 aa13.32□□□□□ -0.28
LRAT-201ENST00000336356 GOLGA6L1Q8N7Z2 621 aa13.32□□□□□ -0.28
LRAT-201ENST00000336356 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms