RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 PIK3R4Q99570 1358 aa18.11■□□□□ 0.49
LIPA-202ENST00000336233 PTCH1Q13635 1447 aa18.11■□□□□ 0.49
LIPA-202ENST00000336233 ZBTB40Q9NUA8 1239 aa18.11■□□□□ 0.49
LIPA-202ENST00000336233 DLG5Q8TDM6 1919 aa18.11■□□□□ 0.49
LIPA-202ENST00000336233 ITPRIPQ8IWB1 547 aa18.1■□□□□ 0.49
LIPA-202ENST00000336233 ZNF692Q9BU19 519 aaPredicted RBP18.1■□□□□ 0.49
LIPA-202ENST00000336233 IFT57Q9NWB7 429 aa18.1■□□□□ 0.49
LIPA-202ENST00000336233 EMILIN1Q9Y6C2 1016 aa18.1■□□□□ 0.49
LIPA-202ENST00000336233 NALCNQ8IZF0 1738 aa18.1■□□□□ 0.49
LIPA-202ENST00000336233 SMC5Q8IY18 1101 aa18.1■□□□□ 0.49
LIPA-202ENST00000336233 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
LIPA-202ENST00000336233 ZNF853P0CG23 659 aa18.09■□□□□ 0.49
LIPA-202ENST00000336233 TMEM57Q8N5G2 664 aa18.09■□□□□ 0.49
LIPA-202ENST00000336233 COG3Q96JB2 828 aa18.09■□□□□ 0.49
LIPA-202ENST00000336233 PHACTR3Q96KR7 559 aa18.09■□□□□ 0.49
LIPA-202ENST00000336233 PLEKHG1Q9ULL1 1385 aa18.09■□□□□ 0.49
LIPA-202ENST00000336233 NFKBIBQ15653 356 aa18.08■□□□□ 0.49
LIPA-202ENST00000336233 FBLN1P23142 703 aa18.08■□□□□ 0.48
LIPA-202ENST00000336233 ARHGAP45Q92619 1136 aa18.08■□□□□ 0.48
LIPA-202ENST00000336233 TBC1D32Q96NH3 1257 aa18.08■□□□□ 0.48
LIPA-202ENST00000336233 PRR36Q9H6K5 1346 aa18.08■□□□□ 0.48
LIPA-202ENST00000336233 ROBO2Q9HCK4 1378 aa18.08■□□□□ 0.48
LIPA-202ENST00000336233 GNAI1P63096 354 aa18.08■□□□□ 0.48
LIPA-202ENST00000336233 LMOD3Q0VAK6 560 aa18.08■□□□□ 0.48
LIPA-202ENST00000336233 UPF2Q9HAU5 1272 aaKnown RBP18.07■□□□□ 0.48
LIPA-202ENST00000336233 HMOX1P09601 288 aa18.06■□□□□ 0.48
LIPA-202ENST00000336233 BECN1Q14457 450 aa18.06■□□□□ 0.48
LIPA-202ENST00000336233 ZRANB1Q9UGI0 708 aa18.06■□□□□ 0.48
LIPA-202ENST00000336233 OVOS2A0A0J9YW53 1432 aa18.06■□□□□ 0.48
LIPA-202ENST00000336233 OVOS2Q6IE36 1432 aa18.06■□□□□ 0.48
LIPA-202ENST00000336233 VAMP4O75379 141 aa18.05■□□□□ 0.48
LIPA-202ENST00000336233 MRPL50Q8N5N7 158 aaKnown RBP18.05■□□□□ 0.48
LIPA-202ENST00000336233 PODXL2Q9NZ53 605 aa18.05■□□□□ 0.48
LIPA-202ENST00000336233 RGPD1P0DJD0 1748 aa18.05■□□□□ 0.48
LIPA-202ENST00000336233 CHMP4BQ9H444 224 aaKnown RBP18.04■□□□□ 0.48
LIPA-202ENST00000336233 NCKAP5LQ9HCH0 1330 aa18.03■□□□□ 0.48
LIPA-202ENST00000336233 PLEKHG3A1L390 1219 aa18.02■□□□□ 0.48
LIPA-202ENST00000336233 CFAP44Q96MT7 982 aa18.02■□□□□ 0.48
LIPA-202ENST00000336233 SLIT1O75093 1534 aa18.02■□□□□ 0.48
LIPA-202ENST00000336233 ABCC4O15439 1325 aa18.02■□□□□ 0.47
LIPA-202ENST00000336233 MBIPQ9NS73 344 aa18.02■□□□□ 0.47
LIPA-202ENST00000336233 USP6P35125 1406 aa18.01■□□□□ 0.47
LIPA-202ENST00000336233 ARHGAP23Q9P227 1491 aa18.01■□□□□ 0.47
LIPA-202ENST00000336233 NUCB1Q02818 461 aa18.01■□□□□ 0.47
LIPA-202ENST00000336233 PEAK1Q9H792 1746 aa18.01■□□□□ 0.47
LIPA-202ENST00000336233 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
LIPA-202ENST00000336233 USP31Q70CQ4 1352 aa18■□□□□ 0.47
LIPA-202ENST00000336233 SSH2Q76I76 1423 aa18■□□□□ 0.47
LIPA-202ENST00000336233 THUMPD2Q9BTF0 503 aaKnown RBP18■□□□□ 0.47
LIPA-202ENST00000336233 RIMS1Q86UR5 1692 aaKnown RBP18■□□□□ 0.47
LIPA-202ENST00000336233 KIF24Q5T7B8 1368 aa18■□□□□ 0.47
LIPA-202ENST00000336233 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
LIPA-202ENST00000336233 DIP2AQ14689 1571 aa17.99■□□□□ 0.47
LIPA-202ENST00000336233 ZBTB7BO15156 539 aaPredicted RBP17.99■□□□□ 0.47
LIPA-202ENST00000336233 PTPRUQ92729 1446 aa17.99■□□□□ 0.47
LIPA-202ENST00000336233 TSPYL6Q8N831 410 aa17.98■□□□□ 0.47
LIPA-202ENST00000336233 TWISTNBQ3B726 338 aaPredicted RBP17.97■□□□□ 0.47
LIPA-202ENST00000336233 FMN2Q9NZ56 1722 aa17.97■□□□□ 0.47
LIPA-202ENST00000336233 ACEP12821 1306 aa17.97■□□□□ 0.47
LIPA-202ENST00000336233 LTKP29376 864 aa17.96■□□□□ 0.47
LIPA-202ENST00000336233 EIF4A2Q14240 407 aaKnown RBP17.96■□□□□ 0.47
LIPA-202ENST00000336233 RTN4Q9NQC3 1192 aaKnown RBP17.96■□□□□ 0.47
LIPA-202ENST00000336233 GSE1Q14687 1217 aa17.96■□□□□ 0.46
LIPA-202ENST00000336233 GCC1Q96CN9 775 aa17.96■□□□□ 0.46
LIPA-202ENST00000336233 API5Q9BZZ5 524 aaKnown RBP17.95■□□□□ 0.46
LIPA-202ENST00000336233 ANTXR1Q9H6X2 564 aa17.95■□□□□ 0.46
LIPA-202ENST00000336233 CHD1LQ86WJ1 897 aa17.95■□□□□ 0.46
LIPA-202ENST00000336233 C8orf58Q8NAV2 365 aa17.94■□□□□ 0.46
LIPA-202ENST00000336233 IL27Q8NEV9 243 aa17.94■□□□□ 0.46
LIPA-202ENST00000336233 TBC1D2Q9BYX2 928 aa17.93■□□□□ 0.46
LIPA-202ENST00000336233 TTC21AQ8NDW8 1320 aa17.93■□□□□ 0.46
LIPA-202ENST00000336233 ARHGEF10O15013 1369 aa17.93■□□□□ 0.46
LIPA-202ENST00000336233 KIAA0232Q92628 1395 aa17.93■□□□□ 0.46
LIPA-202ENST00000336233 XRN1Q8IZH2 1706 aaKnown RBP17.93■□□□□ 0.46
LIPA-202ENST00000336233 FRAT2O75474 233 aaPredicted RBP17.93■□□□□ 0.46
LIPA-202ENST00000336233 C22orf23Q9BZE7 217 aa17.93■□□□□ 0.46
LIPA-202ENST00000336233 USP54Q70EL1 1684 aa17.92■□□□□ 0.46
LIPA-202ENST00000336233 HAP1P54257 671 aaPredicted RBP17.92■□□□□ 0.46
LIPA-202ENST00000336233 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
LIPA-202ENST00000336233 BMP2KLQ5H9B9 411 aa17.91■□□□□ 0.46
LIPA-202ENST00000336233 TBX22Q9Y458 520 aa17.91■□□□□ 0.46
LIPA-202ENST00000336233 SULT6B1Q6IMI4 303 aa17.9■□□□□ 0.46
LIPA-202ENST00000336233 AEBP1Q8IUX7 1158 aa17.9■□□□□ 0.46
LIPA-202ENST00000336233 EID1Q9Y6B2 187 aa17.9■□□□□ 0.46
LIPA-202ENST00000336233 FER1L4A9Z1Z3 1794 aa17.9■□□□□ 0.46
LIPA-202ENST00000336233 CHL1O00533 1208 aa17.9■□□□□ 0.46
LIPA-202ENST00000336233 RGS12O14924 1447 aa17.9■□□□□ 0.46
LIPA-202ENST00000336233 LNPKQ9C0E8 428 aa17.89■□□□□ 0.45
LIPA-202ENST00000336233 CRB1P82279 1406 aa17.88■□□□□ 0.45
LIPA-202ENST00000336233 RBM25P49756 843 aaKnown RBP17.88■□□□□ 0.45
LIPA-202ENST00000336233 MFAP1P55081 439 aaKnown RBP17.88■□□□□ 0.45
LIPA-202ENST00000336233 SIRT2Q8IXJ6 389 aa17.88■□□□□ 0.45
LIPA-202ENST00000336233 PIK3C2AO00443 1686 aa17.88■□□□□ 0.45
LIPA-202ENST00000336233 INTS3Q68E01 1043 aaKnown RBP17.88■□□□□ 0.45
LIPA-202ENST00000336233 SBNO1A3KN83 1393 aa17.88■□□□□ 0.45
LIPA-202ENST00000336233 ANKARQ7Z5J8 1434 aa17.87■□□□□ 0.45
LIPA-202ENST00000336233 ELL2O00472 640 aaPredicted RBP17.87■□□□□ 0.45
LIPA-202ENST00000336233 DCTN1Q14203 1278 aa17.87■□□□□ 0.45
LIPA-202ENST00000336233 KDRP35968 1356 aa17.87■□□□□ 0.45
LIPA-202ENST00000336233 FLT4P35916 1363 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms