RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 C3P01024 1663 aa22.46■■□□□ 1.19
LRCH3-201ENST00000334859 PRR36Q9H6K5 1346 aa22.46■■□□□ 1.19
LRCH3-201ENST00000334859 ROBO2Q9HCK4 1378 aa22.46■■□□□ 1.19
LRCH3-201ENST00000334859 ZBTB40Q9NUA8 1239 aa22.45■■□□□ 1.18
LRCH3-201ENST00000334859 GNAI1P63096 354 aa22.44■■□□□ 1.18
LRCH3-201ENST00000334859 ZNF428Q96B54 188 aa22.44■■□□□ 1.18
LRCH3-201ENST00000334859 BECN1Q14457 450 aa22.43■■□□□ 1.18
LRCH3-201ENST00000334859 IFT57Q9NWB7 429 aa22.43■■□□□ 1.18
LRCH3-201ENST00000334859 ZNF692Q9BU19 519 aaPredicted RBP22.42■■□□□ 1.18
LRCH3-201ENST00000334859 LMOD3Q0VAK6 560 aa22.41■■□□□ 1.18
LRCH3-201ENST00000334859 ADAMTS13Q76LX8 1427 aa22.41■■□□□ 1.18
LRCH3-201ENST00000334859 NUTM2FA1L443 756 aa22.41■■□□□ 1.18
LRCH3-201ENST00000334859 ELL2O00472 640 aaPredicted RBP22.41■■□□□ 1.18
LRCH3-201ENST00000334859 TSPYL6Q8N831 410 aa22.41■■□□□ 1.18
LRCH3-201ENST00000334859 MBIPQ9NS73 344 aa22.41■■□□□ 1.18
LRCH3-201ENST00000334859 DLG5Q8TDM6 1919 aa22.4■■□□□ 1.18
LRCH3-201ENST00000334859 TBC1D32Q96NH3 1257 aa22.4■■□□□ 1.18
LRCH3-201ENST00000334859 VAMP4O75379 141 aa22.4■■□□□ 1.18
LRCH3-201ENST00000334859 SMC5Q8IY18 1101 aa22.4■■□□□ 1.18
LRCH3-201ENST00000334859 BRPF1P55201 1214 aaPredicted RBP22.38■■□□□ 1.17
LRCH3-201ENST00000334859 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.37■■□□□ 1.17
LRCH3-201ENST00000334859 MRPL50Q8N5N7 158 aaKnown RBP22.37■■□□□ 1.17
LRCH3-201ENST00000334859 FAM83GA6ND36 823 aa22.37■■□□□ 1.17
LRCH3-201ENST00000334859 ZNF853P0CG23 659 aa22.37■■□□□ 1.17
LRCH3-201ENST00000334859 NRKQ7Z2Y5 1582 aa22.36■■□□□ 1.17
LRCH3-201ENST00000334859 LTKP29376 864 aa22.36■■□□□ 1.17
LRCH3-201ENST00000334859 TWISTNBQ3B726 338 aaPredicted RBP22.36■■□□□ 1.17
LRCH3-201ENST00000334859 PTCH1Q13635 1447 aa22.36■■□□□ 1.17
LRCH3-201ENST00000334859 ACEP12821 1306 aa22.36■■□□□ 1.17
LRCH3-201ENST00000334859 TTC21BQ7Z4L5 1316 aa22.36■■□□□ 1.17
LRCH3-201ENST00000334859 PLEKHG1Q9ULL1 1385 aa22.36■■□□□ 1.17
LRCH3-201ENST00000334859 CFAP44Q96MT7 982 aa22.36■■□□□ 1.17
LRCH3-201ENST00000334859 TOPAZ1Q8N9V7 1692 aa22.35■■□□□ 1.17
LRCH3-201ENST00000334859 DCTN1Q14203 1278 aa22.34■■□□□ 1.17
LRCH3-201ENST00000334859 AEBP1Q8IUX7 1158 aa22.34■■□□□ 1.17
LRCH3-201ENST00000334859 SLC26A8Q96RN1 970 aa22.34■■□□□ 1.17
LRCH3-201ENST00000334859 FRAT2O75474 233 aaPredicted RBP22.33■■□□□ 1.17
LRCH3-201ENST00000334859 ARHGAP45Q92619 1136 aa22.33■■□□□ 1.17
LRCH3-201ENST00000334859 MFAP1P55081 439 aaKnown RBP22.33■■□□□ 1.16
LRCH3-201ENST00000334859 EIF4A2Q14240 407 aaKnown RBP22.33■■□□□ 1.16
LRCH3-201ENST00000334859 C8orf58Q8NAV2 365 aa22.33■■□□□ 1.16
LRCH3-201ENST00000334859 CEBPAP49715 358 aaPredicted RBP22.32■■□□□ 1.16
LRCH3-201ENST00000334859 SULT6B1Q6IMI4 303 aa22.32■■□□□ 1.16
LRCH3-201ENST00000334859 LNPKQ9C0E8 428 aa22.32■■□□□ 1.16
LRCH3-201ENST00000334859 SLKQ9H2G2 1235 aaPredicted RBP22.32■■□□□ 1.16
LRCH3-201ENST00000334859 C1orf115Q9H7X2 142 aa22.32■■□□□ 1.16
LRCH3-201ENST00000334859 OVOS2A0A0J9YW53 1432 aa22.32■■□□□ 1.16
LRCH3-201ENST00000334859 OVOS2Q6IE36 1432 aa22.32■■□□□ 1.16
LRCH3-201ENST00000334859 NUCB1Q02818 461 aa22.32■■□□□ 1.16
LRCH3-201ENST00000334859 CHMP4BQ9H444 224 aaKnown RBP22.32■■□□□ 1.16
LRCH3-201ENST00000334859 PIK3R4Q99570 1358 aa22.32■■□□□ 1.16
LRCH3-201ENST00000334859 USP6P35125 1406 aa22.31■■□□□ 1.16
LRCH3-201ENST00000334859 SOX12O15370 315 aa22.31■■□□□ 1.16
LRCH3-201ENST00000334859 ZBTB7BO15156 539 aaPredicted RBP22.31■■□□□ 1.16
LRCH3-201ENST00000334859 PLPPR3Q6T4P5 718 aa22.31■■□□□ 1.16
LRCH3-201ENST00000334859 EID1Q9Y6B2 187 aa22.3■■□□□ 1.16
LRCH3-201ENST00000334859 ABCC4O15439 1325 aa22.3■■□□□ 1.16
LRCH3-201ENST00000334859 PLEKHG3A1L390 1219 aa22.29■■□□□ 1.16
LRCH3-201ENST00000334859 GSE1Q14687 1217 aa22.29■■□□□ 1.16
LRCH3-201ENST00000334859 CHD1LQ86WJ1 897 aa22.29■■□□□ 1.16
LRCH3-201ENST00000334859 PTPRUQ92729 1446 aa22.28■■□□□ 1.16
LRCH3-201ENST00000334859 C22orf23Q9BZE7 217 aa22.28■■□□□ 1.16
LRCH3-201ENST00000334859 TBC1D2Q9BYX2 928 aa22.28■■□□□ 1.16
LRCH3-201ENST00000334859 HSP90AB2PQ58FF8 381 aa22.27■■□□□ 1.16
LRCH3-201ENST00000334859 NALCNQ8IZF0 1738 aa22.27■■□□□ 1.15
LRCH3-201ENST00000334859 PEAK1Q9H792 1746 aa22.26■■□□□ 1.15
LRCH3-201ENST00000334859 API5Q9BZZ5 524 aaKnown RBP22.26■■□□□ 1.15
LRCH3-201ENST00000334859 ANKRD45Q5TZF3 282 aa22.25■■□□□ 1.15
LRCH3-201ENST00000334859 GCC1Q96CN9 775 aa22.24■■□□□ 1.15
LRCH3-201ENST00000334859 AMOTL2Q9Y2J4 779 aa22.24■■□□□ 1.15
LRCH3-201ENST00000334859 MCM10Q7L590 875 aa22.24■■□□□ 1.15
LRCH3-201ENST00000334859 USP31Q70CQ4 1352 aa22.22■■□□□ 1.15
LRCH3-201ENST00000334859 KRT24Q2M2I5 525 aa22.22■■□□□ 1.15
LRCH3-201ENST00000334859 RGPD1P0DJD0 1748 aa22.21■■□□□ 1.15
LRCH3-201ENST00000334859 SIRT2Q8IXJ6 389 aa22.2■■□□□ 1.14
LRCH3-201ENST00000334859 ANTXR1Q9H6X2 564 aa22.2■■□□□ 1.14
LRCH3-201ENST00000334859 SLIT1O75093 1534 aa22.2■■□□□ 1.14
LRCH3-201ENST00000334859 SSH2Q76I76 1423 aa22.19■■□□□ 1.14
LRCH3-201ENST00000334859 SPRYD3Q8NCJ5 442 aa22.19■■□□□ 1.14
LRCH3-201ENST00000334859 NGDNQ8NEJ9 315 aaKnown RBP22.19■■□□□ 1.14
LRCH3-201ENST00000334859 HAP1P54257 671 aaPredicted RBP22.19■■□□□ 1.14
LRCH3-201ENST00000334859 FMN2Q9NZ56 1722 aa22.19■■□□□ 1.14
LRCH3-201ENST00000334859 MAP3K19Q56UN5 1328 aa22.19■■□□□ 1.14
LRCH3-201ENST00000334859 TTC21AQ8NDW8 1320 aa22.19■■□□□ 1.14
LRCH3-201ENST00000334859 BMP2KLQ5H9B9 411 aa22.18■■□□□ 1.14
LRCH3-201ENST00000334859 DIP2AQ14689 1571 aa22.18■■□□□ 1.14
LRCH3-201ENST00000334859 ARHGAP23Q9P227 1491 aa22.18■■□□□ 1.14
LRCH3-201ENST00000334859 CHL1O00533 1208 aa22.18■■□□□ 1.14
LRCH3-201ENST00000334859 ARHGEF10O15013 1369 aa22.17■■□□□ 1.14
LRCH3-201ENST00000334859 TBX22Q9Y458 520 aa22.17■■□□□ 1.14
LRCH3-201ENST00000334859 FLT4P35916 1363 aa22.16■■□□□ 1.14
LRCH3-201ENST00000334859 RGPD8O14715 1765 aaPredicted RBP22.16■■□□□ 1.14
LRCH3-201ENST00000334859 FER1L4A9Z1Z3 1794 aa22.15■■□□□ 1.14
LRCH3-201ENST00000334859 KIF24Q5T7B8 1368 aa22.15■■□□□ 1.14
LRCH3-201ENST00000334859 RIMS1Q86UR5 1692 aaKnown RBP22.15■■□□□ 1.14
LRCH3-201ENST00000334859 SBNO1A3KN83 1393 aa22.14■■□□□ 1.14
LRCH3-201ENST00000334859 KIAA0232Q92628 1395 aa22.14■■□□□ 1.14
LRCH3-201ENST00000334859 AMPHP49418 695 aa22.14■■□□□ 1.13
LRCH3-201ENST00000334859 HSCBQ8IWL3 235 aa22.13■■□□□ 1.13
LRCH3-201ENST00000334859 FOXO3O43524 673 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms