RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 ODF2Q5BJF6 829 aa19.74■□□□□ 0.75
NSMCE3-201ENST00000332303 VSIG10Q8N0Z9 540 aa19.74■□□□□ 0.75
NSMCE3-201ENST00000332303 SYNJ1O43426 1573 aa19.74■□□□□ 0.75
NSMCE3-201ENST00000332303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.74■□□□□ 0.75
NSMCE3-201ENST00000332303 PIP4K2AP48426 406 aaPredicted RBP19.74■□□□□ 0.75
NSMCE3-201ENST00000332303 TRIM22Q8IYM9 498 aa19.74■□□□□ 0.75
NSMCE3-201ENST00000332303 SIL1Q9H173 461 aa19.74■□□□□ 0.75
NSMCE3-201ENST00000332303 SRGAP3O43295 1099 aa19.73■□□□□ 0.75
NSMCE3-201ENST00000332303 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
NSMCE3-201ENST00000332303 DAPK1P53355 1430 aa19.73■□□□□ 0.75
NSMCE3-201ENST00000332303 PRDM11Q9NQV5 511 aa19.73■□□□□ 0.75
NSMCE3-201ENST00000332303 KLHL34Q8N239 644 aa19.73■□□□□ 0.75
NSMCE3-201ENST00000332303 DDX54Q8TDD1 881 aaKnown RBP19.73■□□□□ 0.75
NSMCE3-201ENST00000332303 AK7Q96M32 723 aa19.73■□□□□ 0.75
NSMCE3-201ENST00000332303 K7ELQ4 463 aaPredicted RBP19.73■□□□□ 0.75
NSMCE3-201ENST00000332303 CCDC57Q2TAC2 916 aa19.73■□□□□ 0.75
NSMCE3-201ENST00000332303 NFE2L2Q16236 605 aa19.72■□□□□ 0.75
NSMCE3-201ENST00000332303 KDM4AO75164 1064 aa19.72■□□□□ 0.75
NSMCE3-201ENST00000332303 CEP126Q9P2H0 1117 aa19.72■□□□□ 0.75
NSMCE3-201ENST00000332303 CDK5RAP3Q96JB5 506 aa19.72■□□□□ 0.75
NSMCE3-201ENST00000332303 KRT85P78386 507 aa19.71■□□□□ 0.75
NSMCE3-201ENST00000332303 SMC2O95347 1197 aa19.71■□□□□ 0.75
NSMCE3-201ENST00000332303 MPHOSPH8Q99549 860 aa19.71■□□□□ 0.75
NSMCE3-201ENST00000332303 RRS1Q15050 365 aaKnown RBP19.71■□□□□ 0.75
NSMCE3-201ENST00000332303 ZSCAN25Q6NSZ9 544 aa19.71■□□□□ 0.75
NSMCE3-201ENST00000332303 BLOC1S2Q6QNY1 142 aa19.71■□□□□ 0.75
NSMCE3-201ENST00000332303 TMPOP42166 694 aaKnown RBP19.71■□□□□ 0.74
NSMCE3-201ENST00000332303 TOPBP1Q92547 1522 aa19.7■□□□□ 0.74
NSMCE3-201ENST00000332303 SMARCE1Q969G3 411 aa19.7■□□□□ 0.74
NSMCE3-201ENST00000332303 POLA1P09884 1462 aaPredicted RBP19.69■□□□□ 0.74
NSMCE3-201ENST00000332303 CEBPZQ03701 1054 aaKnown RBP19.69■□□□□ 0.74
NSMCE3-201ENST00000332303 CCDC192P0DO97 292 aa19.69■□□□□ 0.74
NSMCE3-201ENST00000332303 MYL6BP14649 208 aa19.69■□□□□ 0.74
NSMCE3-201ENST00000332303 SLFN5Q08AF3 891 aa19.69■□□□□ 0.74
NSMCE3-201ENST00000332303 MTERF4Q7Z6M4 381 aaKnown RBP19.69■□□□□ 0.74
NSMCE3-201ENST00000332303 AACSQ86V21 672 aa19.69■□□□□ 0.74
NSMCE3-201ENST00000332303 CCAR1Q8IX12 1150 aaKnown RBP19.69■□□□□ 0.74
NSMCE3-201ENST00000332303 CIZ1Q9ULV3 898 aaPredicted RBP19.69■□□□□ 0.74
NSMCE3-201ENST00000332303 CCP110O43303 1012 aa19.68■□□□□ 0.74
NSMCE3-201ENST00000332303 LARP1BQ659C4 914 aaKnown RBP19.68■□□□□ 0.74
NSMCE3-201ENST00000332303 CCDC184Q52MB2 194 aa19.68■□□□□ 0.74
NSMCE3-201ENST00000332303 DHX8Q14562 1220 aaKnown RBP19.68■□□□□ 0.74
NSMCE3-201ENST00000332303 MAGEC2Q9UBF1 373 aaPredicted RBP19.68■□□□□ 0.74
NSMCE3-201ENST00000332303 NESP48681 1621 aa19.68■□□□□ 0.74
NSMCE3-201ENST00000332303 NUDT16Q96DE0 195 aaKnown RBP19.68■□□□□ 0.74
NSMCE3-201ENST00000332303 CTNNA3Q9UI47 895 aa19.68■□□□□ 0.74
NSMCE3-201ENST00000332303 TIAM1Q13009 1591 aa19.67■□□□□ 0.74
NSMCE3-201ENST00000332303 HMGN5P82970 282 aaKnown RBP19.67■□□□□ 0.74
NSMCE3-201ENST00000332303 ME1P48163 572 aa19.67■□□□□ 0.74
NSMCE3-201ENST00000332303 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
NSMCE3-201ENST00000332303 CAGE1Q8TC20 777 aa19.67■□□□□ 0.74
NSMCE3-201ENST00000332303 BTBD11A6QL63 1104 aa19.67■□□□□ 0.74
NSMCE3-201ENST00000332303 KRT32Q14532 448 aa19.67■□□□□ 0.74
NSMCE3-201ENST00000332303 ZFYVE27Q5T4F4 411 aa19.67■□□□□ 0.74
NSMCE3-201ENST00000332303 MAP7D2Q96T17 732 aa19.67■□□□□ 0.74
NSMCE3-201ENST00000332303 ZSCAN31Q96LW9 406 aaPredicted RBP19.66■□□□□ 0.74
NSMCE3-201ENST00000332303 HECW1Q76N89 1606 aa19.66■□□□□ 0.74
NSMCE3-201ENST00000332303 PDIA4P13667 645 aaKnown RBP19.66■□□□□ 0.74
NSMCE3-201ENST00000332303 CNKSR2Q8WXI2 1034 aa19.66■□□□□ 0.74
NSMCE3-201ENST00000332303 ERCC4Q92889 916 aaPredicted RBP19.66■□□□□ 0.74
NSMCE3-201ENST00000332303 STK3Q13188 491 aa19.66■□□□□ 0.74
NSMCE3-201ENST00000332303 IL1RAPL2Q9NP60 686 aa19.65■□□□□ 0.74
NSMCE3-201ENST00000332303 NAIPQ13075 1403 aa19.65■□□□□ 0.74
NSMCE3-201ENST00000332303 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
NSMCE3-201ENST00000332303 FKBP4Q02790 459 aaKnown RBP eCLIP19.65■□□□□ 0.74
NSMCE3-201ENST00000332303 KRT18P05783 430 aaKnown RBP19.64■□□□□ 0.74
NSMCE3-201ENST00000332303 KCNH5Q8NCM2 988 aa19.64■□□□□ 0.74
NSMCE3-201ENST00000332303 TNMDQ9H2S6 317 aa19.64■□□□□ 0.74
NSMCE3-201ENST00000332303 TTLL5Q6EMB2 1281 aa19.64■□□□□ 0.73
NSMCE3-201ENST00000332303 POGZQ7Z3K3 1410 aa19.64■□□□□ 0.73
NSMCE3-201ENST00000332303 CCDC69A6NI79 296 aa19.63■□□□□ 0.73
NSMCE3-201ENST00000332303 GNAT3A8MTJ3 354 aa19.63■□□□□ 0.73
NSMCE3-201ENST00000332303 CDKL5O76039 1030 aa19.63■□□□□ 0.73
NSMCE3-201ENST00000332303 TMEM57Q8N5G2 664 aa19.63■□□□□ 0.73
NSMCE3-201ENST00000332303 BRPF1P55201 1214 aaPredicted RBP19.63■□□□□ 0.73
NSMCE3-201ENST00000332303 RDXP35241 583 aaKnown RBP19.63■□□□□ 0.73
NSMCE3-201ENST00000332303 ZNHIT6Q9NWK9 470 aaKnown RBP19.63■□□□□ 0.73
NSMCE3-201ENST00000332303 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 DACH1Q9UI36 760 aa19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 PATL2C9JE40 543 aaKnown RBP19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 JAKMIP1Q96N16 626 aaKnown RBP19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 MAP4K4O95819 1239 aaPredicted RBP19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 STIM1Q13586 685 aa19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 KIAA0586Q9BVV6 1533 aa19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 SERPINC1P01008 464 aa19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 CWC27Q6UX04 472 aaKnown RBP19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 PDRG1Q9NUG6 133 aa19.62■□□□□ 0.73
NSMCE3-201ENST00000332303 ATP2B2Q01814 1243 aa19.61■□□□□ 0.73
NSMCE3-201ENST00000332303 HSP90AB2PQ58FF8 381 aa19.61■□□□□ 0.73
NSMCE3-201ENST00000332303 CFAP45Q9UL16 551 aa19.61■□□□□ 0.73
NSMCE3-201ENST00000332303 MYO6Q9UM54 1294 aa19.61■□□□□ 0.73
NSMCE3-201ENST00000332303 NOL7Q9UMY1 257 aaKnown RBP19.61■□□□□ 0.73
NSMCE3-201ENST00000332303 DUSP27Q5VZP5 1158 aa19.6■□□□□ 0.73
NSMCE3-201ENST00000332303 KIF1BPQ96EK5 621 aa19.6■□□□□ 0.73
NSMCE3-201ENST00000332303 SOGA3Q5TF21 947 aa19.6■□□□□ 0.73
NSMCE3-201ENST00000332303 ABCC11Q96J66 1382 aa19.6■□□□□ 0.73
NSMCE3-201ENST00000332303 ZC3H6P61129 1189 aaKnown RBP19.6■□□□□ 0.73
NSMCE3-201ENST00000332303 NUP133Q8WUM0 1156 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms