RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 KCNJ4P48050 445 aa16.67■□□□□ 0.26
PRKD1-201ENST00000331968 EVA1CP58658 441 aa16.67■□□□□ 0.26
PRKD1-201ENST00000331968 TSHZ3Q63HK5 1081 aa16.67■□□□□ 0.26
PRKD1-201ENST00000331968 DDX54Q8TDD1 881 aaKnown RBP16.67■□□□□ 0.26
PRKD1-201ENST00000331968 MAP4K4O95819 1239 aaPredicted RBP16.66■□□□□ 0.26
PRKD1-201ENST00000331968 MCM4P33991 863 aa16.66■□□□□ 0.26
PRKD1-201ENST00000331968 FAM43AQ8N2R8 423 aa16.66■□□□□ 0.26
PRKD1-201ENST00000331968 NAP1L2Q9ULW6 460 aaPredicted RBP16.66■□□□□ 0.26
PRKD1-201ENST00000331968 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
PRKD1-201ENST00000331968 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
PRKD1-201ENST00000331968 MYL6BP14649 208 aa16.65■□□□□ 0.26
PRKD1-201ENST00000331968 RBM10P98175 930 aaKnown RBP16.65■□□□□ 0.26
PRKD1-201ENST00000331968 JARID2Q92833 1246 aaPredicted RBP16.65■□□□□ 0.26
PRKD1-201ENST00000331968 CLTCL1P53675 1640 aa16.65■□□□□ 0.26
PRKD1-201ENST00000331968 EXOC6BQ9Y2D4 811 aa16.65■□□□□ 0.26
PRKD1-201ENST00000331968 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
PRKD1-201ENST00000331968 RAPGEF4Q8WZA2 1011 aa16.65■□□□□ 0.26
PRKD1-201ENST00000331968 API5Q9BZZ5 524 aaKnown RBP16.64■□□□□ 0.25
PRKD1-201ENST00000331968 BCL11BQ9C0K0 894 aaPredicted RBP16.64■□□□□ 0.25
PRKD1-201ENST00000331968 IL1RAPL2Q9NP60 686 aa16.63■□□□□ 0.25
PRKD1-201ENST00000331968 FAM13BQ9NYF5 915 aa16.63■□□□□ 0.25
PRKD1-201ENST00000331968 C9orf78Q9NZ63 289 aaPredicted RBP16.63■□□□□ 0.25
PRKD1-201ENST00000331968 RRAGDQ9NQL2 400 aaPredicted RBP16.63■□□□□ 0.25
PRKD1-201ENST00000331968 RNF214Q8ND24 703 aa16.63■□□□□ 0.25
PRKD1-201ENST00000331968 CASC1Q6TDU7 716 aa16.62■□□□□ 0.25
PRKD1-201ENST00000331968 CHMP4BQ9H444 224 aaKnown RBP16.62■□□□□ 0.25
PRKD1-201ENST00000331968 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
PRKD1-201ENST00000331968 CROCC2H7BZ55 1655 aa16.61■□□□□ 0.25
PRKD1-201ENST00000331968 FAM177BA6PVY3 158 aa16.61■□□□□ 0.25
PRKD1-201ENST00000331968 MTHFSDQ2M296 383 aaKnown RBP16.61■□□□□ 0.25
PRKD1-201ENST00000331968 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
PRKD1-201ENST00000331968 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
PRKD1-201ENST00000331968 XRCC6P12956 609 aaKnown RBP eCLIP16.6■□□□□ 0.25
PRKD1-201ENST00000331968 EIF2AK4Q9P2K8 1649 aaKnown RBP16.6■□□□□ 0.25
PRKD1-201ENST00000331968 EYA1Q99502 592 aa16.6■□□□□ 0.25
PRKD1-201ENST00000331968 PRR36Q9H6K5 1346 aa16.59■□□□□ 0.25
PRKD1-201ENST00000331968 PTCD1O75127 700 aaKnown RBP16.59■□□□□ 0.25
PRKD1-201ENST00000331968 CCDC85AQ96PX6 553 aaPredicted RBP16.59■□□□□ 0.25
PRKD1-201ENST00000331968 SIL1Q9H173 461 aa16.59■□□□□ 0.25
PRKD1-201ENST00000331968 C16orf71Q8IYS4 520 aaPredicted RBP16.59■□□□□ 0.25
PRKD1-201ENST00000331968 TRPM2O94759 1503 aa16.59■□□□□ 0.25
PRKD1-201ENST00000331968 E9PCH4 1651 aa16.58■□□□□ 0.25
PRKD1-201ENST00000331968 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.24
PRKD1-201ENST00000331968 DDX11L8A8MPP1 907 aa16.58■□□□□ 0.24
PRKD1-201ENST00000331968 SLC39A6Q13433 755 aa16.58■□□□□ 0.24
PRKD1-201ENST00000331968 HMMRO75330 724 aa16.58■□□□□ 0.24
PRKD1-201ENST00000331968 SURF6O75683 361 aaKnown RBP16.58■□□□□ 0.24
PRKD1-201ENST00000331968 GAS2L2Q8NHY3 880 aa16.58■□□□□ 0.24
PRKD1-201ENST00000331968 MLH3Q9UHC1 1453 aa16.57■□□□□ 0.24
PRKD1-201ENST00000331968 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
PRKD1-201ENST00000331968 CAVIN1Q6NZI2 390 aaKnown RBP16.57■□□□□ 0.24
PRKD1-201ENST00000331968 NUTM2BA6NNL0 878 aaPredicted RBP16.57■□□□□ 0.24
PRKD1-201ENST00000331968 NUTM2EB1AL46 878 aaPredicted RBP16.57■□□□□ 0.24
PRKD1-201ENST00000331968 NUTM2AQ8IVF1 878 aaPredicted RBP16.57■□□□□ 0.24
PRKD1-201ENST00000331968 GRPEL1Q9HAV7 217 aa16.57■□□□□ 0.24
PRKD1-201ENST00000331968 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
PRKD1-201ENST00000331968 G2E3Q7L622 706 aa16.56■□□□□ 0.24
PRKD1-201ENST00000331968 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
PRKD1-201ENST00000331968 NEO1Q92859 1461 aa16.56■□□□□ 0.24
PRKD1-201ENST00000331968 PIK3C2GO75747 1445 aa16.56■□□□□ 0.24
PRKD1-201ENST00000331968 KRT28Q7Z3Y7 464 aa16.56■□□□□ 0.24
PRKD1-201ENST00000331968 MEIS3Q99687 375 aa16.56■□□□□ 0.24
PRKD1-201ENST00000331968 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
PRKD1-201ENST00000331968 VAMP4O75379 141 aa16.55■□□□□ 0.24
PRKD1-201ENST00000331968 IL13P35225 146 aa16.55■□□□□ 0.24
PRKD1-201ENST00000331968 TOM1L2Q6ZVM7 507 aa16.55■□□□□ 0.24
PRKD1-201ENST00000331968 IQGAP3Q86VI3 1631 aa16.55■□□□□ 0.24
PRKD1-201ENST00000331968 CFAP44Q96MT7 982 aa16.55■□□□□ 0.24
PRKD1-201ENST00000331968 PRDM11Q9NQV5 511 aa16.55■□□□□ 0.24
PRKD1-201ENST00000331968 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
PRKD1-201ENST00000331968 BTBD11A6QL63 1104 aa16.54■□□□□ 0.24
PRKD1-201ENST00000331968 NPHP1O15259 732 aa16.54■□□□□ 0.24
PRKD1-201ENST00000331968 MRE11P49959 708 aa16.54■□□□□ 0.24
PRKD1-201ENST00000331968 RIC3Q7Z5B4 369 aa16.54■□□□□ 0.24
PRKD1-201ENST00000331968 ANO2Q9NQ90 1003 aa16.54■□□□□ 0.24
PRKD1-201ENST00000331968 ROBO2Q9HCK4 1378 aa16.54■□□□□ 0.24
PRKD1-201ENST00000331968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
PRKD1-201ENST00000331968 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
PRKD1-201ENST00000331968 CHD1LQ86WJ1 897 aa16.54■□□□□ 0.24
PRKD1-201ENST00000331968 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
PRKD1-201ENST00000331968 TRPM1Q7Z4N2 1603 aa16.54■□□□□ 0.24
PRKD1-201ENST00000331968 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
PRKD1-201ENST00000331968 ABCC3O15438 1527 aa16.53■□□□□ 0.24
PRKD1-201ENST00000331968 ESPNB1AK53 854 aa16.53■□□□□ 0.24
PRKD1-201ENST00000331968 FGD1P98174 961 aa16.53■□□□□ 0.24
PRKD1-201ENST00000331968 CEP152O94986 1710 aa16.52■□□□□ 0.24
PRKD1-201ENST00000331968 TBC1D32Q96NH3 1257 aa16.52■□□□□ 0.24
PRKD1-201ENST00000331968 NASPP49321 788 aaPredicted RBP16.52■□□□□ 0.23
PRKD1-201ENST00000331968 CCDC30Q5VVM6 783 aa16.52■□□□□ 0.23
PRKD1-201ENST00000331968 TMEM2Q9UHN6 1383 aa16.52■□□□□ 0.23
PRKD1-201ENST00000331968 DTNBO60941 627 aa16.52■□□□□ 0.23
PRKD1-201ENST00000331968 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.23
PRKD1-201ENST00000331968 IFT57Q9NWB7 429 aa16.52■□□□□ 0.23
PRKD1-201ENST00000331968 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
PRKD1-201ENST00000331968 LGR6Q9HBX8 967 aa16.51■□□□□ 0.23
PRKD1-201ENST00000331968 PLXNC1O60486 1568 aa16.51■□□□□ 0.23
PRKD1-201ENST00000331968 TAF7Q15545 349 aaPredicted RBP16.5■□□□□ 0.23
PRKD1-201ENST00000331968 SSFA2P28290 1259 aa16.5■□□□□ 0.23
PRKD1-201ENST00000331968 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
PRKD1-201ENST00000331968 EFCAB6Q5THR3 1501 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms