RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 CAVIN1Q6NZI2 390 aaKnown RBP17.87■□□□□ 0.45
SNX20-202ENST00000330943 CHMP4BQ9H444 224 aaKnown RBP17.87■□□□□ 0.45
SNX20-202ENST00000330943 ELL2O00472 640 aaPredicted RBP17.86■□□□□ 0.45
SNX20-202ENST00000330943 IDI1Q13907 227 aa17.86■□□□□ 0.45
SNX20-202ENST00000330943 MRPL50Q8N5N7 158 aaKnown RBP17.86■□□□□ 0.45
SNX20-202ENST00000330943 THUMPD2Q9BTF0 503 aaKnown RBP17.86■□□□□ 0.45
SNX20-202ENST00000330943 CAMSAP1Q5T5Y3 1602 aa17.86■□□□□ 0.45
SNX20-202ENST00000330943 OFD1O75665 1012 aa17.85■□□□□ 0.45
SNX20-202ENST00000330943 GSPT1P15170 499 aaKnown RBP17.85■□□□□ 0.45
SNX20-202ENST00000330943 PRKAR2BP31323 418 aa17.85■□□□□ 0.45
SNX20-202ENST00000330943 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
SNX20-202ENST00000330943 PDCL3Q9H2J4 239 aa17.85■□□□□ 0.45
SNX20-202ENST00000330943 YEATS2Q9ULM3 1422 aa17.85■□□□□ 0.45
SNX20-202ENST00000330943 LRRC7Q96NW7 1537 aa17.85■□□□□ 0.45
SNX20-202ENST00000330943 BRPF1P55201 1214 aaPredicted RBP17.85■□□□□ 0.45
SNX20-202ENST00000330943 TSPYL6Q8N831 410 aa17.85■□□□□ 0.45
SNX20-202ENST00000330943 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
SNX20-202ENST00000330943 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.85■□□□□ 0.45
SNX20-202ENST00000330943 VAMP4O75379 141 aa17.84■□□□□ 0.45
SNX20-202ENST00000330943 ZNF445P59923 1031 aa17.84■□□□□ 0.45
SNX20-202ENST00000330943 RABEP1Q15276 862 aa17.84■□□□□ 0.45
SNX20-202ENST00000330943 ZSCAN23Q3MJ62 389 aa17.84■□□□□ 0.45
SNX20-202ENST00000330943 TERF2IPQ9NYB0 399 aa17.84■□□□□ 0.45
SNX20-202ENST00000330943 PTCH1Q13635 1447 aa17.84■□□□□ 0.45
SNX20-202ENST00000330943 VGFO15240 615 aaPredicted RBP17.84■□□□□ 0.45
SNX20-202ENST00000330943 PIK3R4Q99570 1358 aa17.83■□□□□ 0.44
SNX20-202ENST00000330943 FCHSD2O94868 740 aa17.83■□□□□ 0.44
SNX20-202ENST00000330943 NUCB2P80303 420 aa17.83■□□□□ 0.44
SNX20-202ENST00000330943 PKP1Q13835 747 aa17.83■□□□□ 0.44
SNX20-202ENST00000330943 ARHGAP45Q92619 1136 aa17.83■□□□□ 0.44
SNX20-202ENST00000330943 MINK1Q8N4C8 1332 aaPredicted RBP17.82■□□□□ 0.44
SNX20-202ENST00000330943 POGZQ7Z3K3 1410 aa17.82■□□□□ 0.44
SNX20-202ENST00000330943 LMBRD1Q9NUN5 540 aa17.82■□□□□ 0.44
SNX20-202ENST00000330943 ANKRD26Q9UPS8 1709 aa17.82■□□□□ 0.44
SNX20-202ENST00000330943 PLEKHM2Q8IWE5 1019 aa17.81■□□□□ 0.44
SNX20-202ENST00000330943 RBSNQ9H1K0 784 aa17.81■□□□□ 0.44
SNX20-202ENST00000330943 ABCC4O15439 1325 aa17.81■□□□□ 0.44
SNX20-202ENST00000330943 RBM10P98175 930 aaKnown RBP17.81■□□□□ 0.44
SNX20-202ENST00000330943 STAG3Q9UJ98 1225 aa17.81■□□□□ 0.44
SNX20-202ENST00000330943 PNPLA6Q8IY17 1366 aa17.8■□□□□ 0.44
SNX20-202ENST00000330943 REREQ9P2R6 1566 aa17.8■□□□□ 0.44
SNX20-202ENST00000330943 HMOX1P09601 288 aa17.8■□□□□ 0.44
SNX20-202ENST00000330943 R3HCC1Q9Y3T6 440 aaKnown RBP17.8■□□□□ 0.44
SNX20-202ENST00000330943 ARHGAP31Q2M1Z3 1444 aa17.8■□□□□ 0.44
SNX20-202ENST00000330943 FBLN1P23142 703 aa17.8■□□□□ 0.44
SNX20-202ENST00000330943 PHACTR3Q96KR7 559 aa17.8■□□□□ 0.44
SNX20-202ENST00000330943 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
SNX20-202ENST00000330943 CYP2E1P05181 493 aaPredicted RBP17.79■□□□□ 0.44
SNX20-202ENST00000330943 ATAD2Q6PL18 1390 aa17.79■□□□□ 0.44
SNX20-202ENST00000330943 PRPF40AO75400 957 aaKnown RBP17.78■□□□□ 0.44
SNX20-202ENST00000330943 PRIM1P49642 420 aaKnown RBP17.78■□□□□ 0.44
SNX20-202ENST00000330943 NFE2L2Q16236 605 aa17.78■□□□□ 0.44
SNX20-202ENST00000330943 NEXMIFQ5QGS0 1516 aa17.78■□□□□ 0.44
SNX20-202ENST00000330943 TTC22Q5TAA0 569 aa17.78■□□□□ 0.44
SNX20-202ENST00000330943 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
SNX20-202ENST00000330943 RBM27Q9P2N5 1060 aaKnown RBP17.78■□□□□ 0.44
SNX20-202ENST00000330943 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
SNX20-202ENST00000330943 USP26Q9BXU7 913 aa17.78■□□□□ 0.44
SNX20-202ENST00000330943 GNAI1P63096 354 aa17.78■□□□□ 0.44
SNX20-202ENST00000330943 HDGFL2Q7Z4V5 671 aaPredicted RBP17.78■□□□□ 0.44
SNX20-202ENST00000330943 MBIPQ9NS73 344 aa17.78■□□□□ 0.44
SNX20-202ENST00000330943 TWISTNBQ3B726 338 aaPredicted RBP17.77■□□□□ 0.44
SNX20-202ENST00000330943 HS1BP3Q53T59 392 aa17.77■□□□□ 0.44
SNX20-202ENST00000330943 ZGPATQ8N5A5 531 aaKnown RBP17.77■□□□□ 0.44
SNX20-202ENST00000330943 XPCQ01831 940 aaPredicted RBP17.77■□□□□ 0.43
SNX20-202ENST00000330943 NOL7Q9UMY1 257 aaKnown RBP17.77■□□□□ 0.43
SNX20-202ENST00000330943 ZFYVE9O95405 1425 aa17.77■□□□□ 0.43
SNX20-202ENST00000330943 FRMPD1Q5SYB0 1578 aa17.76■□□□□ 0.43
SNX20-202ENST00000330943 INTS3Q68E01 1043 aaKnown RBP17.76■□□□□ 0.43
SNX20-202ENST00000330943 PRAM1Q96QH2 718 aa17.76■□□□□ 0.43
SNX20-202ENST00000330943 HECW2Q9P2P5 1572 aa17.76■□□□□ 0.43
SNX20-202ENST00000330943 GPT2Q8TD30 523 aa17.76■□□□□ 0.43
SNX20-202ENST00000330943 PDLIM2Q96JY6 352 aa17.76■□□□□ 0.43
SNX20-202ENST00000330943 CFAP44Q96MT7 982 aa17.76■□□□□ 0.43
SNX20-202ENST00000330943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNX20-202ENST00000330943 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
SNX20-202ENST00000330943 FAM13BQ9NYF5 915 aa17.75■□□□□ 0.43
SNX20-202ENST00000330943 TERF1P54274 439 aa17.75■□□□□ 0.43
SNX20-202ENST00000330943 OTUD7AQ8TE49 926 aaPredicted RBP17.75■□□□□ 0.43
SNX20-202ENST00000330943 API5Q9BZZ5 524 aaKnown RBP17.75■□□□□ 0.43
SNX20-202ENST00000330943 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.75■□□□□ 0.43
SNX20-202ENST00000330943 CDC42BPGQ6DT37 1551 aa17.75■□□□□ 0.43
SNX20-202ENST00000330943 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
SNX20-202ENST00000330943 ST18O60284 1047 aa17.75■□□□□ 0.43
SNX20-202ENST00000330943 CHAMP1Q96JM3 812 aa17.75■□□□□ 0.43
SNX20-202ENST00000330943 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
SNX20-202ENST00000330943 CWC22Q9HCG8 908 aaKnown RBP17.75■□□□□ 0.43
SNX20-202ENST00000330943 ABCC3O15438 1527 aa17.74■□□□□ 0.43
SNX20-202ENST00000330943 KNDC1Q76NI1 1749 aa17.74■□□□□ 0.43
SNX20-202ENST00000330943 ZNF500O60304 480 aaPredicted RBP17.74■□□□□ 0.43
SNX20-202ENST00000330943 C8orf58Q8NAV2 365 aa17.74■□□□□ 0.43
SNX20-202ENST00000330943 POLKQ9UBT6 870 aa17.74■□□□□ 0.43
SNX20-202ENST00000330943 APBB1O00213 710 aa17.74■□□□□ 0.43
SNX20-202ENST00000330943 SIGLEC1Q9BZZ2 1709 aa17.74■□□□□ 0.43
SNX20-202ENST00000330943 CABP1Q9NZU7 370 aa17.73■□□□□ 0.43
SNX20-202ENST00000330943 SDSP20132 328 aa17.72■□□□□ 0.43
SNX20-202ENST00000330943 FOXD4L5Q5VV16 416 aaPredicted RBP17.72■□□□□ 0.43
SNX20-202ENST00000330943 FOXD4L4Q8WXT5 416 aaPredicted RBP17.72■□□□□ 0.43
SNX20-202ENST00000330943 ZDHHC9Q9Y397 364 aa17.72■□□□□ 0.43
SNX20-202ENST00000330943 KIF20BQ96Q89 1820 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms