RNA–Protein interactions for RNA: ENST00000329255.3

ALX4-201, Transcript of ALX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX4, Length 5,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4-201ENST00000329255 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
ALX4-201ENST00000329255 CUX1P39880 1505 aa16.08■□□□□ 0.16
ALX4-201ENST00000329255 SCAPERQ9BY12 1400 aa16.08■□□□□ 0.16
ALX4-201ENST00000329255 CCDC69A6NI79 296 aa16.08■□□□□ 0.16
ALX4-201ENST00000329255 MEX3CQ5U5Q3 659 aaKnown RBP16.08■□□□□ 0.16
ALX4-201ENST00000329255 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.16
ALX4-201ENST00000329255 INCENPQ9NQS7 918 aa16.08■□□□□ 0.16
ALX4-201ENST00000329255 CYB5RLQ6IPT4 315 aa16.07■□□□□ 0.16
ALX4-201ENST00000329255 SPATA32Q96LK8 384 aa16.07■□□□□ 0.16
ALX4-201ENST00000329255 TAX1BP1Q86VP1 789 aa16.07■□□□□ 0.16
ALX4-201ENST00000329255 ZSCAN31Q96LW9 406 aaPredicted RBP16.07■□□□□ 0.16
ALX4-201ENST00000329255 SRCIN1Q9C0H9 1055 aa16.07■□□□□ 0.16
ALX4-201ENST00000329255 CENPHQ9H3R5 247 aa16.07■□□□□ 0.16
ALX4-201ENST00000329255 CFAP45Q9UL16 551 aa16.07■□□□□ 0.16
ALX4-201ENST00000329255 NUP62CLQ9H1M0 184 aa16.07■□□□□ 0.16
ALX4-201ENST00000329255 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
ALX4-201ENST00000329255 CDKL5O76039 1030 aa16.07■□□□□ 0.16
ALX4-201ENST00000329255 ATF3P18847 181 aa16.06■□□□□ 0.16
ALX4-201ENST00000329255 PODXL2Q9NZ53 605 aa16.06■□□□□ 0.16
ALX4-201ENST00000329255 FGD6Q6ZV73 1430 aa16.06■□□□□ 0.16
ALX4-201ENST00000329255 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
ALX4-201ENST00000329255 SMTNL1A8MU46 457 aa16.06■□□□□ 0.16
ALX4-201ENST00000329255 ESPNB1AK53 854 aa16.06■□□□□ 0.16
ALX4-201ENST00000329255 PDCL2Q8N4E4 241 aa16.06■□□□□ 0.16
ALX4-201ENST00000329255 FAM193AP78312 1265 aa16.05■□□□□ 0.16
ALX4-201ENST00000329255 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
ALX4-201ENST00000329255 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
ALX4-201ENST00000329255 SOGA3Q5TF21 947 aa16.05■□□□□ 0.16
ALX4-201ENST00000329255 ZSCAN25Q6NSZ9 544 aa16.05■□□□□ 0.16
ALX4-201ENST00000329255 CCDC102AQ96A19 550 aa16.05■□□□□ 0.16
ALX4-201ENST00000329255 ZHX3Q9H4I2 956 aa16.05■□□□□ 0.16
ALX4-201ENST00000329255 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
ALX4-201ENST00000329255 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
ALX4-201ENST00000329255 NUTM2GQ5VZR2 741 aa16.04■□□□□ 0.16
ALX4-201ENST00000329255 BLOC1S2Q6QNY1 142 aa16.04■□□□□ 0.16
ALX4-201ENST00000329255 MPNDQ8N594 471 aa16.04■□□□□ 0.16
ALX4-201ENST00000329255 PDRG1Q9NUG6 133 aa16.04■□□□□ 0.16
ALX4-201ENST00000329255 SMG6Q86US8 1419 aaKnown RBP16.04■□□□□ 0.16
ALX4-201ENST00000329255 MCM4P33991 863 aa16.04■□□□□ 0.16
ALX4-201ENST00000329255 LRRFIP2Q9Y608 721 aaKnown RBP16.04■□□□□ 0.16
ALX4-201ENST00000329255 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
ALX4-201ENST00000329255 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
ALX4-201ENST00000329255 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
ALX4-201ENST00000329255 GBP2P32456 591 aaPredicted RBP16.03■□□□□ 0.16
ALX4-201ENST00000329255 CHD1LQ86WJ1 897 aa16.03■□□□□ 0.16
ALX4-201ENST00000329255 BMP2KQ9NSY1 1161 aaPredicted RBP16.03■□□□□ 0.16
ALX4-201ENST00000329255 EPB41L2O43491 1005 aaKnown RBP16.03■□□□□ 0.16
ALX4-201ENST00000329255 GBP3Q9H0R5 595 aa16.03■□□□□ 0.16
ALX4-201ENST00000329255 FAM177BA6PVY3 158 aa16.02■□□□□ 0.16
ALX4-201ENST00000329255 BCAR3O75815 825 aa16.02■□□□□ 0.16
ALX4-201ENST00000329255 UBXN4Q92575 508 aa16.02■□□□□ 0.16
ALX4-201ENST00000329255 KIF2AO00139 706 aaPredicted RBP16.02■□□□□ 0.16
ALX4-201ENST00000329255 PNISRQ8TF01 805 aaKnown RBP16.02■□□□□ 0.16
ALX4-201ENST00000329255 TAF4BQ92750 862 aa16.02■□□□□ 0.16
ALX4-201ENST00000329255 GPRASP1Q5JY77 1395 aa16.02■□□□□ 0.16
ALX4-201ENST00000329255 MVPQ14764 893 aaKnown RBP16.02■□□□□ 0.16
ALX4-201ENST00000329255 KRT32Q14532 448 aa16.02■□□□□ 0.15
ALX4-201ENST00000329255 FILIP1Q7Z7B0 1213 aa16.02■□□□□ 0.15
ALX4-201ENST00000329255 WDR63Q8IWG1 891 aa16.02■□□□□ 0.15
ALX4-201ENST00000329255 CCDC148Q8NFR7 591 aa16.02■□□□□ 0.15
ALX4-201ENST00000329255 TSR2Q969E8 191 aaKnown RBP16.02■□□□□ 0.15
ALX4-201ENST00000329255 ARHGAP29Q52LW3 1261 aa16.01■□□□□ 0.15
ALX4-201ENST00000329255 NUP133Q8WUM0 1156 aa16.01■□□□□ 0.15
ALX4-201ENST00000329255 ANKRD50Q9ULJ7 1429 aa16.01■□□□□ 0.15
ALX4-201ENST00000329255 JAKMIP3Q5VZ66 844 aa16.01■□□□□ 0.15
ALX4-201ENST00000329255 ATF7IPQ6VMQ6 1270 aa16.01■□□□□ 0.15
ALX4-201ENST00000329255 CTNNA3Q9UI47 895 aa16.01■□□□□ 0.15
ALX4-201ENST00000329255 KIAA1328Q86T90 577 aa16.01■□□□□ 0.15
ALX4-201ENST00000329255 WIZO95785 1651 aa16.01■□□□□ 0.15
ALX4-201ENST00000329255 TMEM132EQ6IEE7 984 aa16■□□□□ 0.15
ALX4-201ENST00000329255 ZSCAN30Q86W11 494 aa16■□□□□ 0.15
ALX4-201ENST00000329255 SEPT11Q9NVA2 429 aaKnown RBP16■□□□□ 0.15
ALX4-201ENST00000329255 ATP2B2Q01814 1243 aa16■□□□□ 0.15
ALX4-201ENST00000329255 MAP3K11Q16584 847 aa16■□□□□ 0.15
ALX4-201ENST00000329255 TMCO3Q6UWJ1 677 aa16■□□□□ 0.15
ALX4-201ENST00000329255 WASF1Q92558 559 aa16■□□□□ 0.15
ALX4-201ENST00000329255 JAKMIP1Q96N16 626 aaKnown RBP16■□□□□ 0.15
ALX4-201ENST00000329255 ABTB2Q8N961 1025 aa16■□□□□ 0.15
ALX4-201ENST00000329255 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
ALX4-201ENST00000329255 MAP4K4O95819 1239 aaPredicted RBP15.99■□□□□ 0.15
ALX4-201ENST00000329255 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
ALX4-201ENST00000329255 EIF5P55010 431 aaKnown RBP15.99■□□□□ 0.15
ALX4-201ENST00000329255 SIL1Q9H173 461 aa15.99■□□□□ 0.15
ALX4-201ENST00000329255 ERICH4A6NGS2 130 aa15.99■□□□□ 0.15
ALX4-201ENST00000329255 DESP17661 470 aa15.99■□□□□ 0.15
ALX4-201ENST00000329255 AKNAQ7Z591 1439 aa15.98■□□□□ 0.15
ALX4-201ENST00000329255 CRACR2AQ9BSW2 395 aa15.98■□□□□ 0.15
ALX4-201ENST00000329255 STK11IPQ8N1F8 1099 aa15.98■□□□□ 0.15
ALX4-201ENST00000329255 DYDC1Q8WWB3 177 aa15.98■□□□□ 0.15
ALX4-201ENST00000329255 AACSQ86V21 672 aa15.98■□□□□ 0.15
ALX4-201ENST00000329255 ZNF397Q8NF99 534 aaPredicted RBP15.98■□□□□ 0.15
ALX4-201ENST00000329255 SHTN1A0MZ66 631 aa15.97■□□□□ 0.15
ALX4-201ENST00000329255 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
ALX4-201ENST00000329255 CEP131Q9UPN4 1083 aa15.97■□□□□ 0.15
ALX4-201ENST00000329255 TATP17735 454 aaPredicted RBP15.97■□□□□ 0.15
ALX4-201ENST00000329255 CFAP100Q494V2 611 aa15.97■□□□□ 0.15
ALX4-201ENST00000329255 UBAC1Q9BSL1 405 aa15.97■□□□□ 0.15
ALX4-201ENST00000329255 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
ALX4-201ENST00000329255 ZSCAN12O43309 604 aa15.96■□□□□ 0.15
ALX4-201ENST00000329255 SSBP05455 408 aaKnown RBP eCLIP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms