RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 KIF3AQ9Y496 699 aa16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 PIK3C2GO75747 1445 aa16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 SF3A1Q15459 793 aaKnown RBP16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 C8orf34Q49A92 452 aa16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 CNTROBQ8N137 903 aa16.71■□□□□ 0.27
DNMT3B-202ENST00000328111 RNF214Q8ND24 703 aa16.71■□□□□ 0.27
DNMT3B-202ENST00000328111 RNF20Q5VTR2 975 aa16.71■□□□□ 0.27
DNMT3B-202ENST00000328111 ATF3P18847 181 aa16.71■□□□□ 0.26
DNMT3B-202ENST00000328111 MBIPQ9NS73 344 aa16.71■□□□□ 0.26
DNMT3B-202ENST00000328111 NASPP49321 788 aaPredicted RBP16.7■□□□□ 0.26
DNMT3B-202ENST00000328111 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
DNMT3B-202ENST00000328111 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
DNMT3B-202ENST00000328111 MAP4K4O95819 1239 aaPredicted RBP16.7■□□□□ 0.26
DNMT3B-202ENST00000328111 NEUROD6Q96NK8 337 aa16.7■□□□□ 0.26
DNMT3B-202ENST00000328111 SRGAP3O43295 1099 aa16.69■□□□□ 0.26
DNMT3B-202ENST00000328111 CCDC27Q2M243 656 aa16.69■□□□□ 0.26
DNMT3B-202ENST00000328111 PROSER2Q86WR7 435 aaPredicted RBP16.69■□□□□ 0.26
DNMT3B-202ENST00000328111 ZNF518AQ6AHZ1 1483 aa16.68■□□□□ 0.26
DNMT3B-202ENST00000328111 RBM33Q96EV2 1170 aaKnown RBP16.68■□□□□ 0.26
DNMT3B-202ENST00000328111 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
DNMT3B-202ENST00000328111 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
DNMT3B-202ENST00000328111 EIF2AK4Q9P2K8 1649 aaKnown RBP16.68■□□□□ 0.26
DNMT3B-202ENST00000328111 MBD5Q9P267 1494 aa16.68■□□□□ 0.26
DNMT3B-202ENST00000328111 PRKCSHP14314 528 aaPredicted RBP16.68■□□□□ 0.26
DNMT3B-202ENST00000328111 TBC1D32Q96NH3 1257 aa16.68■□□□□ 0.26
DNMT3B-202ENST00000328111 IL16Q14005 1332 aa16.67■□□□□ 0.26
DNMT3B-202ENST00000328111 GNAT3A8MTJ3 354 aa16.67■□□□□ 0.26
DNMT3B-202ENST00000328111 FSD1Q9BTV5 496 aa16.67■□□□□ 0.26
DNMT3B-202ENST00000328111 ABCC2Q92887 1545 aa16.67■□□□□ 0.26
DNMT3B-202ENST00000328111 POLKQ9UBT6 870 aa16.67■□□□□ 0.26
DNMT3B-202ENST00000328111 USHBP1Q8N6Y0 703 aa16.66■□□□□ 0.26
DNMT3B-202ENST00000328111 MCM2P49736 904 aa16.66■□□□□ 0.26
DNMT3B-202ENST00000328111 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.66■□□□□ 0.26
DNMT3B-202ENST00000328111 HSP90AB2PQ58FF8 381 aa16.66■□□□□ 0.26
DNMT3B-202ENST00000328111 SYTL4Q96C24 671 aaPredicted RBP16.66■□□□□ 0.26
DNMT3B-202ENST00000328111 SIL1Q9H173 461 aa16.65■□□□□ 0.26
DNMT3B-202ENST00000328111 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
DNMT3B-202ENST00000328111 CIZ1Q9ULV3 898 aaPredicted RBP16.65■□□□□ 0.26
DNMT3B-202ENST00000328111 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
DNMT3B-202ENST00000328111 FAM43AQ8N2R8 423 aa16.64■□□□□ 0.26
DNMT3B-202ENST00000328111 BICD2Q8TD16 824 aa16.64■□□□□ 0.26
DNMT3B-202ENST00000328111 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
DNMT3B-202ENST00000328111 ACEP12821 1306 aa16.64■□□□□ 0.25
DNMT3B-202ENST00000328111 SEC24BO95487 1268 aa16.64■□□□□ 0.25
DNMT3B-202ENST00000328111 FOSBP53539 338 aa16.64■□□□□ 0.25
DNMT3B-202ENST00000328111 CDK11BP21127 795 aaKnown RBP16.64■□□□□ 0.25
DNMT3B-202ENST00000328111 ANKLE2Q86XL3 938 aa16.64■□□□□ 0.25
DNMT3B-202ENST00000328111 TULP1O00294 542 aaPredicted RBP16.63■□□□□ 0.25
DNMT3B-202ENST00000328111 PHACTR3Q96KR7 559 aa16.63■□□□□ 0.25
DNMT3B-202ENST00000328111 BMP2KLQ5H9B9 411 aa16.63■□□□□ 0.25
DNMT3B-202ENST00000328111 TBC1D9Q6ZT07 1266 aa16.63■□□□□ 0.25
DNMT3B-202ENST00000328111 NUTM1Q86Y26 1132 aa16.63■□□□□ 0.25
DNMT3B-202ENST00000328111 AEBP1Q8IUX7 1158 aa16.63■□□□□ 0.25
DNMT3B-202ENST00000328111 C8orf58Q8NAV2 365 aa16.63■□□□□ 0.25
DNMT3B-202ENST00000328111 UPF3BQ9BZI7 483 aaKnown RBP16.63■□□□□ 0.25
DNMT3B-202ENST00000328111 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.63■□□□□ 0.25
DNMT3B-202ENST00000328111 NPC1L1Q9UHC9 1359 aa16.63■□□□□ 0.25
DNMT3B-202ENST00000328111 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
DNMT3B-202ENST00000328111 APPP05067 770 aa16.62■□□□□ 0.25
DNMT3B-202ENST00000328111 ZC3H6P61129 1189 aaKnown RBP16.62■□□□□ 0.25
DNMT3B-202ENST00000328111 TSPYL6Q8N831 410 aa16.62■□□□□ 0.25
DNMT3B-202ENST00000328111 CWC22Q9HCG8 908 aaKnown RBP16.62■□□□□ 0.25
DNMT3B-202ENST00000328111 A0A1W2PP64 1363 aa16.62■□□□□ 0.25
DNMT3B-202ENST00000328111 BECN2A8MW95 431 aa16.62■□□□□ 0.25
DNMT3B-202ENST00000328111 MYL6BP14649 208 aa16.62■□□□□ 0.25
DNMT3B-202ENST00000328111 PUS7Q96PZ0 661 aaKnown RBP16.62■□□□□ 0.25
DNMT3B-202ENST00000328111 ISY1Q9ULR0 285 aaKnown RBP16.62■□□□□ 0.25
DNMT3B-202ENST00000328111 HSP90AA2PQ14568 343 aaPredicted RBP16.61■□□□□ 0.25
DNMT3B-202ENST00000328111 GRPEL1Q9HAV7 217 aa16.61■□□□□ 0.25
DNMT3B-202ENST00000328111 GOLGA6L19H0YKK7 550 aa16.61■□□□□ 0.25
DNMT3B-202ENST00000328111 FIBPO43427 364 aa16.61■□□□□ 0.25
DNMT3B-202ENST00000328111 NCKAP5LQ9HCH0 1330 aa16.61■□□□□ 0.25
DNMT3B-202ENST00000328111 MBD3O95983 291 aa16.61■□□□□ 0.25
DNMT3B-202ENST00000328111 LRRFIP1Q32MZ4 808 aaKnown RBP16.61■□□□□ 0.25
DNMT3B-202ENST00000328111 DNAJC2Q99543 621 aaKnown RBP16.61■□□□□ 0.25
DNMT3B-202ENST00000328111 TAF7Q15545 349 aaPredicted RBP16.61■□□□□ 0.25
DNMT3B-202ENST00000328111 CPLX1O14810 134 aa16.6■□□□□ 0.25
DNMT3B-202ENST00000328111 CWC27Q6UX04 472 aaKnown RBP16.6■□□□□ 0.25
DNMT3B-202ENST00000328111 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
DNMT3B-202ENST00000328111 MX1P20591 662 aa16.6■□□□□ 0.25
DNMT3B-202ENST00000328111 NUCB1Q02818 461 aa16.6■□□□□ 0.25
DNMT3B-202ENST00000328111 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
DNMT3B-202ENST00000328111 TPM4P67936 248 aa16.59■□□□□ 0.25
DNMT3B-202ENST00000328111 FOXO3O43524 673 aa16.59■□□□□ 0.25
DNMT3B-202ENST00000328111 FLIIQ13045 1269 aa16.59■□□□□ 0.25
DNMT3B-202ENST00000328111 ERC1Q8IUD2 1116 aa16.59■□□□□ 0.25
DNMT3B-202ENST00000328111 CFAP65Q6ZU64 1925 aaKnown RBP16.59■□□□□ 0.25
DNMT3B-202ENST00000328111 MAST1Q9Y2H9 1570 aa16.58■□□□□ 0.25
DNMT3B-202ENST00000328111 WASHC4Q2M389 1173 aa16.58■□□□□ 0.25
DNMT3B-202ENST00000328111 ARHGAP45Q92619 1136 aa16.58■□□□□ 0.25
DNMT3B-202ENST00000328111 LRRFIP2Q9Y608 721 aaKnown RBP16.58■□□□□ 0.25
DNMT3B-202ENST00000328111 VAMP4O75379 141 aa16.58■□□□□ 0.24
DNMT3B-202ENST00000328111 PSMA5P28066 241 aa16.58■□□□□ 0.24
DNMT3B-202ENST00000328111 KRT24Q2M2I5 525 aa16.58■□□□□ 0.24
DNMT3B-202ENST00000328111 MEIS3Q99687 375 aa16.58■□□□□ 0.24
DNMT3B-202ENST00000328111 AACSQ86V21 672 aa16.58■□□□□ 0.24
DNMT3B-202ENST00000328111 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.24
DNMT3B-202ENST00000328111 TSHZ3Q63HK5 1081 aa16.57■□□□□ 0.24
DNMT3B-202ENST00000328111 CPLX2Q6PUV4 134 aaKnown RBP16.57■□□□□ 0.24
DNMT3B-202ENST00000328111 TNPO1Q92973 898 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms