RNA–Protein interactions for RNA: ENST00000326524.6

GDNF-201, Transcript of glial cell derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDNF, Length 3,810 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-201ENST00000326524 RPGRIP1LQ68CZ1 1315 aa13.74□□□□□ -0.21
GDNF-201ENST00000326524 PRPF40AO75400 957 aaKnown RBP13.74□□□□□ -0.21
GDNF-201ENST00000326524 XPCQ01831 940 aaPredicted RBP13.74□□□□□ -0.21
GDNF-201ENST00000326524 ELL2O00472 640 aaPredicted RBP13.73□□□□□ -0.21
GDNF-201ENST00000326524 BRPF1P55201 1214 aaPredicted RBP13.73□□□□□ -0.21
GDNF-201ENST00000326524 MRPL50Q8N5N7 158 aaKnown RBP13.73□□□□□ -0.21
GDNF-201ENST00000326524 ARHGAP45Q92619 1136 aa13.73□□□□□ -0.21
GDNF-201ENST00000326524 TERF2IPQ9NYB0 399 aa13.73□□□□□ -0.21
GDNF-201ENST00000326524 PRIM1P49642 420 aaKnown RBP13.73□□□□□ -0.21
GDNF-201ENST00000326524 GLI2P10070 1586 aa13.73□□□□□ -0.21
GDNF-201ENST00000326524 ST18O60284 1047 aa13.73□□□□□ -0.21
GDNF-201ENST00000326524 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
GDNF-201ENST00000326524 PRKAR2BP31323 418 aa13.73□□□□□ -0.21
GDNF-201ENST00000326524 SIRT2Q8IXJ6 389 aa13.73□□□□□ -0.21
GDNF-201ENST00000326524 CWC22Q9HCG8 908 aaKnown RBP13.73□□□□□ -0.21
GDNF-201ENST00000326524 UQCRHLA0A096LP55 91 aa13.72□□□□□ -0.21
GDNF-201ENST00000326524 ZNF500O60304 480 aaPredicted RBP13.72□□□□□ -0.21
GDNF-201ENST00000326524 UQCRHP07919 91 aa13.72□□□□□ -0.21
GDNF-201ENST00000326524 FCHSD2O94868 740 aa13.72□□□□□ -0.21
GDNF-201ENST00000326524 PKP1Q13835 747 aa13.72□□□□□ -0.21
GDNF-201ENST00000326524 REREQ9P2R6 1566 aa13.72□□□□□ -0.21
GDNF-201ENST00000326524 FYB1O15117 783 aa13.72□□□□□ -0.21
GDNF-201ENST00000326524 INTS3Q68E01 1043 aaKnown RBP13.72□□□□□ -0.21
GDNF-201ENST00000326524 CASC1Q6TDU7 716 aa13.72□□□□□ -0.21
GDNF-201ENST00000326524 STK26Q9P289 416 aa13.72□□□□□ -0.21
GDNF-201ENST00000326524 VAMP4O75379 141 aa13.71□□□□□ -0.21
GDNF-201ENST00000326524 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.21
GDNF-201ENST00000326524 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.21
GDNF-201ENST00000326524 UHRF1BP1LA0JNW5 1464 aa13.71□□□□□ -0.21
GDNF-201ENST00000326524 PTCH1Q13635 1447 aa13.71□□□□□ -0.21
GDNF-201ENST00000326524 GGT6Q6P531 493 aa13.71□□□□□ -0.21
GDNF-201ENST00000326524 PLEKHM2Q8IWE5 1019 aa13.71□□□□□ -0.21
GDNF-201ENST00000326524 PDLIM2Q96JY6 352 aa13.71□□□□□ -0.21
GDNF-201ENST00000326524 ARHGAP31Q2M1Z3 1444 aa13.71□□□□□ -0.22
GDNF-201ENST00000326524 VGFO15240 615 aaPredicted RBP13.71□□□□□ -0.22
GDNF-201ENST00000326524 CYP2E1P05181 493 aaPredicted RBP13.71□□□□□ -0.22
GDNF-201ENST00000326524 THUMPD2Q9BTF0 503 aaKnown RBP13.71□□□□□ -0.22
GDNF-201ENST00000326524 SENP3Q9H4L4 574 aaPredicted RBP13.71□□□□□ -0.22
GDNF-201ENST00000326524 ZKSCAN5Q9Y2L8 839 aa13.71□□□□□ -0.22
GDNF-201ENST00000326524 TTC22Q5TAA0 569 aa13.7□□□□□ -0.22
GDNF-201ENST00000326524 PIK3R4Q99570 1358 aa13.7□□□□□ -0.22
GDNF-201ENST00000326524 TSPYL6Q8N831 410 aa13.7□□□□□ -0.22
GDNF-201ENST00000326524 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
GDNF-201ENST00000326524 LMTK2Q8IWU2 1503 aa13.7□□□□□ -0.22
GDNF-201ENST00000326524 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
GDNF-201ENST00000326524 ARHGEF28Q8N1W1 1705 aaKnown RBP13.7□□□□□ -0.22
GDNF-201ENST00000326524 GNAI1P63096 354 aa13.69□□□□□ -0.22
GDNF-201ENST00000326524 ABCC4O15439 1325 aa13.69□□□□□ -0.22
GDNF-201ENST00000326524 NPATQ14207 1427 aa13.69□□□□□ -0.22
GDNF-201ENST00000326524 ZGPATQ8N5A5 531 aaKnown RBP13.69□□□□□ -0.22
GDNF-201ENST00000326524 CCDC39Q9UFE4 941 aa13.69□□□□□ -0.22
GDNF-201ENST00000326524 HDGFL2Q7Z4V5 671 aaPredicted RBP13.69□□□□□ -0.22
GDNF-201ENST00000326524 GPT2Q8TD30 523 aa13.69□□□□□ -0.22
GDNF-201ENST00000326524 SYCE3A1L190 88 aa13.68□□□□□ -0.22
GDNF-201ENST00000326524 LRSAM1Q6UWE0 723 aa13.68□□□□□ -0.22
GDNF-201ENST00000326524 MCM5P33992 734 aa13.68□□□□□ -0.22
GDNF-201ENST00000326524 ABCA9Q8IUA7 1624 aa13.68□□□□□ -0.22
GDNF-201ENST00000326524 LRRC7Q96NW7 1537 aa13.68□□□□□ -0.22
GDNF-201ENST00000326524 ATAD2Q6PL18 1390 aa13.68□□□□□ -0.22
GDNF-201ENST00000326524 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
GDNF-201ENST00000326524 NFE2L2Q16236 605 aa13.68□□□□□ -0.22
GDNF-201ENST00000326524 TWISTNBQ3B726 338 aaPredicted RBP13.68□□□□□ -0.22
GDNF-201ENST00000326524 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
GDNF-201ENST00000326524 MINK1Q8N4C8 1332 aaPredicted RBP13.67□□□□□ -0.22
GDNF-201ENST00000326524 HMOX1P09601 288 aa13.67□□□□□ -0.22
GDNF-201ENST00000326524 ARID3AQ99856 593 aa13.67□□□□□ -0.22
GDNF-201ENST00000326524 FOXD4L5Q5VV16 416 aaPredicted RBP13.67□□□□□ -0.22
GDNF-201ENST00000326524 FOXD4L4Q8WXT5 416 aaPredicted RBP13.67□□□□□ -0.22
GDNF-201ENST00000326524 MTERF4Q7Z6M4 381 aaKnown RBP13.67□□□□□ -0.22
GDNF-201ENST00000326524 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
GDNF-201ENST00000326524 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
GDNF-201ENST00000326524 DCTPP1Q9H773 170 aa13.66□□□□□ -0.22
GDNF-201ENST00000326524 APBB1O00213 710 aa13.66□□□□□ -0.22
GDNF-201ENST00000326524 DYNC1I1O14576 645 aa13.66□□□□□ -0.22
GDNF-201ENST00000326524 REC8O95072 547 aa13.66□□□□□ -0.22
GDNF-201ENST00000326524 RNF214Q8ND24 703 aa13.66□□□□□ -0.22
GDNF-201ENST00000326524 MBIPQ9NS73 344 aa13.66□□□□□ -0.22
GDNF-201ENST00000326524 TMEM63CQ9P1W3 806 aa13.66□□□□□ -0.22
GDNF-201ENST00000326524 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
GDNF-201ENST00000326524 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
GDNF-201ENST00000326524 MBD3O95983 291 aa13.65□□□□□ -0.22
GDNF-201ENST00000326524 ZFYVE9O95405 1425 aa13.65□□□□□ -0.22
GDNF-201ENST00000326524 SASS6Q6UVJ0 657 aa13.65□□□□□ -0.22
GDNF-201ENST00000326524 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
GDNF-201ENST00000326524 CAMSAP1Q5T5Y3 1602 aa13.65□□□□□ -0.22
GDNF-201ENST00000326524 ANKRD26Q9UPS8 1709 aa13.64□□□□□ -0.23
GDNF-201ENST00000326524 SDSP20132 328 aa13.64□□□□□ -0.23
GDNF-201ENST00000326524 OTUD7AQ8TE49 926 aaPredicted RBP13.64□□□□□ -0.23
GDNF-201ENST00000326524 CHAMP1Q96JM3 812 aa13.64□□□□□ -0.23
GDNF-201ENST00000326524 ZDHHC9Q9Y397 364 aa13.64□□□□□ -0.23
GDNF-201ENST00000326524 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
GDNF-201ENST00000326524 DNTTIP2Q5QJE6 756 aaKnown RBP13.63□□□□□ -0.23
GDNF-201ENST00000326524 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.63□□□□□ -0.23
GDNF-201ENST00000326524 C8orf58Q8NAV2 365 aa13.62□□□□□ -0.23
GDNF-201ENST00000326524 NSFL1CQ9UNZ2 370 aaKnown RBP13.62□□□□□ -0.23
GDNF-201ENST00000326524 FBLN1P23142 703 aa13.62□□□□□ -0.23
GDNF-201ENST00000326524 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
GDNF-201ENST00000326524 ERC2O15083 957 aa13.62□□□□□ -0.23
GDNF-201ENST00000326524 SMARCA5O60264 1052 aaPredicted RBP13.62□□□□□ -0.23
GDNF-201ENST00000326524 LMOD3Q0VAK6 560 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms