RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 LRRC7Q96NW7 1537 aa16.42■□□□□ 0.22
CLGN-201ENST00000325617 CHAMP1Q96JM3 812 aa16.42■□□□□ 0.22
CLGN-201ENST00000325617 MCM10Q7L590 875 aa16.41■□□□□ 0.22
CLGN-201ENST00000325617 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
CLGN-201ENST00000325617 CT47B1P0C2W7 299 aaPredicted RBP16.4■□□□□ 0.22
CLGN-201ENST00000325617 GAS2L3Q86XJ1 694 aa16.4■□□□□ 0.22
CLGN-201ENST00000325617 FAM43AQ8N2R8 423 aa16.39■□□□□ 0.21
CLGN-201ENST00000325617 GAS2L2Q8NHY3 880 aa16.39■□□□□ 0.21
CLGN-201ENST00000325617 MAP2P11137 1827 aaKnown RBP16.39■□□□□ 0.21
CLGN-201ENST00000325617 USP32Q8NFA0 1604 aa16.39■□□□□ 0.21
CLGN-201ENST00000325617 SSFA2P28290 1259 aa16.39■□□□□ 0.21
CLGN-201ENST00000325617 IL13P35225 146 aa16.39■□□□□ 0.21
CLGN-201ENST00000325617 PUS7Q96PZ0 661 aaKnown RBP16.38■□□□□ 0.21
CLGN-201ENST00000325617 IL16Q14005 1332 aa16.38■□□□□ 0.21
CLGN-201ENST00000325617 GSPT1P15170 499 aaKnown RBP16.37■□□□□ 0.21
CLGN-201ENST00000325617 ALDH1L2Q3SY69 923 aa16.37■□□□□ 0.21
CLGN-201ENST00000325617 FOXD4L5Q5VV16 416 aaPredicted RBP16.37■□□□□ 0.21
CLGN-201ENST00000325617 TSHZ3Q63HK5 1081 aa16.37■□□□□ 0.21
CLGN-201ENST00000325617 FOXD4L4Q8WXT5 416 aaPredicted RBP16.37■□□□□ 0.21
CLGN-201ENST00000325617 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
CLGN-201ENST00000325617 SULT6B1Q6IMI4 303 aa16.37■□□□□ 0.21
CLGN-201ENST00000325617 DIP2CQ9Y2E4 1556 aa16.36■□□□□ 0.21
CLGN-201ENST00000325617 L1TD1Q5T7N2 865 aaKnown RBP16.36■□□□□ 0.21
CLGN-201ENST00000325617 PNPLA6Q8IY17 1366 aa16.36■□□□□ 0.21
CLGN-201ENST00000325617 FOXO3O43524 673 aa16.35■□□□□ 0.21
CLGN-201ENST00000325617 NUDT16Q96DE0 195 aaKnown RBP16.35■□□□□ 0.21
CLGN-201ENST00000325617 RBM25P49756 843 aaKnown RBP16.35■□□□□ 0.21
CLGN-201ENST00000325617 GNAI1P63096 354 aa16.35■□□□□ 0.21
CLGN-201ENST00000325617 FAM69CQ0P6D2 419 aa16.35■□□□□ 0.21
CLGN-201ENST00000325617 PKP1Q13835 747 aa16.35■□□□□ 0.21
CLGN-201ENST00000325617 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
CLGN-201ENST00000325617 FAM135BQ49AJ0 1406 aa16.34■□□□□ 0.21
CLGN-201ENST00000325617 FSD2A1L4K1 749 aa16.34■□□□□ 0.21
CLGN-201ENST00000325617 F6X3S4 739 aa16.34■□□□□ 0.21
CLGN-201ENST00000325617 SLC4A10Q6U841 1118 aa16.34■□□□□ 0.21
CLGN-201ENST00000325617 COG3Q96JB2 828 aa16.33■□□□□ 0.21
CLGN-201ENST00000325617 PNNQ9H307 717 aaKnown RBP16.33■□□□□ 0.21
CLGN-201ENST00000325617 ALKQ9UM73 1620 aa16.33■□□□□ 0.2
CLGN-201ENST00000325617 ARHGEF40Q8TER5 1519 aa16.33■□□□□ 0.2
CLGN-201ENST00000325617 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
CLGN-201ENST00000325617 PLEKHM2Q8IWE5 1019 aa16.32■□□□□ 0.2
CLGN-201ENST00000325617 METP08581 1390 aa16.32■□□□□ 0.2
CLGN-201ENST00000325617 WASLO00401 505 aaPredicted RBP16.32■□□□□ 0.2
CLGN-201ENST00000325617 NCLP19338 710 aaKnown RBP16.32■□□□□ 0.2
CLGN-201ENST00000325617 MEIS3Q99687 375 aa16.32■□□□□ 0.2
CLGN-201ENST00000325617 GRPEL1Q9HAV7 217 aa16.32■□□□□ 0.2
CLGN-201ENST00000325617 TMEM131LA2VDJ0 1609 aa16.31■□□□□ 0.2
CLGN-201ENST00000325617 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
CLGN-201ENST00000325617 NAP1L5Q96NT1 182 aaPredicted RBP16.31■□□□□ 0.2
CLGN-201ENST00000325617 DDIT3P35638 169 aa16.31■□□□□ 0.2
CLGN-201ENST00000325617 TPRNQ4KMQ1 711 aa16.31■□□□□ 0.2
CLGN-201ENST00000325617 G2E3Q7L622 706 aa16.31■□□□□ 0.2
CLGN-201ENST00000325617 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
CLGN-201ENST00000325617 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
CLGN-201ENST00000325617 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
CLGN-201ENST00000325617 ERBB4Q15303 1308 aa16.3■□□□□ 0.2
CLGN-201ENST00000325617 GCC1Q96CN9 775 aa16.3■□□□□ 0.2
CLGN-201ENST00000325617 K7ELQ4 463 aaPredicted RBP16.29■□□□□ 0.2
CLGN-201ENST00000325617 DTNBO60941 627 aa16.29■□□□□ 0.2
CLGN-201ENST00000325617 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
CLGN-201ENST00000325617 ABCC4O15439 1325 aa16.29■□□□□ 0.2
CLGN-201ENST00000325617 PRR36Q9H6K5 1346 aa16.29■□□□□ 0.2
CLGN-201ENST00000325617 CPS1P31327 1500 aa16.29■□□□□ 0.2
CLGN-201ENST00000325617 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
CLGN-201ENST00000325617 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
CLGN-201ENST00000325617 FOXD4L6Q3SYB3 417 aaPredicted RBP16.28■□□□□ 0.2
CLGN-201ENST00000325617 FOXD4L3Q6VB84 417 aaPredicted RBP16.28■□□□□ 0.2
CLGN-201ENST00000325617 MED14O60244 1454 aa16.28■□□□□ 0.2
CLGN-201ENST00000325617 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
CLGN-201ENST00000325617 PREX1Q8TCU6 1659 aa16.28■□□□□ 0.2
CLGN-201ENST00000325617 ZMYM3Q14202 1370 aa16.27■□□□□ 0.2
CLGN-201ENST00000325617 TSPOAP1O95153 1857 aa16.27■□□□□ 0.2
CLGN-201ENST00000325617 RAB3GAP1Q15042 981 aa16.27■□□□□ 0.2
CLGN-201ENST00000325617 CFAP74Q9C0B2 1584 aa16.27■□□□□ 0.2
CLGN-201ENST00000325617 CDC45O75419 566 aa16.27■□□□□ 0.2
CLGN-201ENST00000325617 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
CLGN-201ENST00000325617 SNX21Q969T3 373 aa16.27■□□□□ 0.2
CLGN-201ENST00000325617 DLG5Q8TDM6 1919 aa16.26■□□□□ 0.19
CLGN-201ENST00000325617 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
CLGN-201ENST00000325617 MCTP1Q6DN14 999 aa16.26■□□□□ 0.19
CLGN-201ENST00000325617 SDSP20132 328 aa16.26■□□□□ 0.19
CLGN-201ENST00000325617 RIMS2Q9UQ26 1411 aa16.25■□□□□ 0.19
CLGN-201ENST00000325617 ZNF428Q96B54 188 aa16.25■□□□□ 0.19
CLGN-201ENST00000325617 EXOC6BQ9Y2D4 811 aa16.25■□□□□ 0.19
CLGN-201ENST00000325617 CCDC61Q9Y6R9 512 aa16.25■□□□□ 0.19
CLGN-201ENST00000325617 ZFYVE9O95405 1425 aa16.25■□□□□ 0.19
CLGN-201ENST00000325617 KIF20BQ96Q89 1820 aa16.25■□□□□ 0.19
CLGN-201ENST00000325617 SLC26A8Q96RN1 970 aa16.25■□□□□ 0.19
CLGN-201ENST00000325617 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
CLGN-201ENST00000325617 ARHGAP31Q2M1Z3 1444 aa16.25■□□□□ 0.19
CLGN-201ENST00000325617 MRE11P49959 708 aa16.24■□□□□ 0.19
CLGN-201ENST00000325617 DDX49Q9Y6V7 483 aaKnown RBP16.24■□□□□ 0.19
CLGN-201ENST00000325617 TTC22Q5TAA0 569 aa16.24■□□□□ 0.19
CLGN-201ENST00000325617 DCTPP1Q9H773 170 aa16.24■□□□□ 0.19
CLGN-201ENST00000325617 MSH6P52701 1360 aa16.24■□□□□ 0.19
CLGN-201ENST00000325617 ARHGAP45Q92619 1136 aa16.24■□□□□ 0.19
CLGN-201ENST00000325617 KNDC1Q76NI1 1749 aa16.23■□□□□ 0.19
CLGN-201ENST00000325617 CEP85Q6P2H3 762 aa16.23■□□□□ 0.19
CLGN-201ENST00000325617 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
CLGN-201ENST00000325617 RBM27Q9P2N5 1060 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms