RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 ALDH1L2Q3SY69 923 aa27.38■■□□□ 1.97
LIMS2-201ENST00000324938 USP6P35125 1406 aa27.37■■□□□ 1.97
LIMS2-201ENST00000324938 RRS1Q15050 365 aaKnown RBP27.37■■□□□ 1.97
LIMS2-201ENST00000324938 RWDD1Q9H446 243 aaPredicted RBP27.37■■□□□ 1.97
LIMS2-201ENST00000324938 TTC21BQ7Z4L5 1316 aa27.37■■□□□ 1.97
LIMS2-201ENST00000324938 ACEP12821 1306 aa27.36■■□□□ 1.97
LIMS2-201ENST00000324938 ZNF428Q96B54 188 aa27.36■■□□□ 1.97
LIMS2-201ENST00000324938 RIMS1Q86UR5 1692 aaKnown RBP27.36■■□□□ 1.97
LIMS2-201ENST00000324938 SLC26A8Q96RN1 970 aa27.34■■□□□ 1.97
LIMS2-201ENST00000324938 NOB1Q9ULX3 412 aaKnown RBP27.34■■□□□ 1.97
LIMS2-201ENST00000324938 DDX19BQ9UMR2 479 aa27.34■■□□□ 1.97
LIMS2-201ENST00000324938 XRN1Q8IZH2 1706 aaKnown RBP27.34■■□□□ 1.97
LIMS2-201ENST00000324938 PEAK1Q9H792 1746 aa27.33■■□□□ 1.97
LIMS2-201ENST00000324938 BRPF1P55201 1214 aaPredicted RBP27.32■■□□□ 1.96
LIMS2-201ENST00000324938 TBX22Q9Y458 520 aa27.32■■□□□ 1.96
LIMS2-201ENST00000324938 RGPD1P0DJD0 1748 aa27.32■■□□□ 1.96
LIMS2-201ENST00000324938 IPO8O15397 1037 aaKnown RBP27.32■■□□□ 1.96
LIMS2-201ENST00000324938 IFT57Q9NWB7 429 aa27.32■■□□□ 1.96
LIMS2-201ENST00000324938 RGPD8O14715 1765 aaPredicted RBP27.32■■□□□ 1.96
LIMS2-201ENST00000324938 LMOD3Q0VAK6 560 aa27.31■■□□□ 1.96
LIMS2-201ENST00000324938 SSH2Q76I76 1423 aa27.31■■□□□ 1.96
LIMS2-201ENST00000324938 GNAI1P63096 354 aa27.31■■□□□ 1.96
LIMS2-201ENST00000324938 FMN2Q9NZ56 1722 aa27.31■■□□□ 1.96
LIMS2-201ENST00000324938 PDZRN3Q9UPQ7 1066 aa27.3■■□□□ 1.96
LIMS2-201ENST00000324938 ZNF853P0CG23 659 aa27.29■■□□□ 1.96
LIMS2-201ENST00000324938 NBR1Q14596 966 aa27.29■■□□□ 1.96
LIMS2-201ENST00000324938 ITPRIPQ8IWB1 547 aa27.29■■□□□ 1.96
LIMS2-201ENST00000324938 AMOTL2Q9Y2J4 779 aa27.29■■□□□ 1.96
LIMS2-201ENST00000324938 USP31Q70CQ4 1352 aa27.28■■□□□ 1.96
LIMS2-201ENST00000324938 THUMPD2Q9BTF0 503 aaKnown RBP27.28■■□□□ 1.96
LIMS2-201ENST00000324938 LAS1LQ9Y4W2 734 aaKnown RBP27.28■■□□□ 1.96
LIMS2-201ENST00000324938 TMEM57Q8N5G2 664 aa27.27■■□□□ 1.96
LIMS2-201ENST00000324938 HDAC1Q13547 482 aaPredicted RBP27.26■■□□□ 1.96
LIMS2-201ENST00000324938 THEMISQ8N1K5 641 aaPredicted RBP27.26■■□□□ 1.96
LIMS2-201ENST00000324938 NUTM2FA1L443 756 aa27.26■■□□□ 1.95
LIMS2-201ENST00000324938 VAMP4O75379 141 aa27.25■■□□□ 1.95
LIMS2-201ENST00000324938 EIF4A2Q14240 407 aaKnown RBP27.25■■□□□ 1.95
LIMS2-201ENST00000324938 MBIPQ9NS73 344 aa27.24■■□□□ 1.95
LIMS2-201ENST00000324938 TTC21AQ8NDW8 1320 aa27.23■■□□□ 1.95
LIMS2-201ENST00000324938 CFAP44Q96MT7 982 aa27.23■■□□□ 1.95
LIMS2-201ENST00000324938 ZBTB40Q9NUA8 1239 aa27.23■■□□□ 1.95
LIMS2-201ENST00000324938 CEP170BQ9Y4F5 1589 aaPredicted RBP27.21■■□□□ 1.95
LIMS2-201ENST00000324938 PIK3R4Q99570 1358 aa27.21■■□□□ 1.95
LIMS2-201ENST00000324938 USP19O94966 1318 aa27.21■■□□□ 1.95
LIMS2-201ENST00000324938 MRPL50Q8N5N7 158 aaKnown RBP27.2■■□□□ 1.95
LIMS2-201ENST00000324938 PIK3C2AO00443 1686 aa27.2■■□□□ 1.95
LIMS2-201ENST00000324938 ARHGAP45Q92619 1136 aa27.2■■□□□ 1.94
LIMS2-201ENST00000324938 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
LIMS2-201ENST00000324938 TSPYL6Q8N831 410 aa27.19■■□□□ 1.94
LIMS2-201ENST00000324938 AEBP1Q8IUX7 1158 aa27.18■■□□□ 1.94
LIMS2-201ENST00000324938 SULT6B1Q6IMI4 303 aa27.17■■□□□ 1.94
LIMS2-201ENST00000324938 ANKARQ7Z5J8 1434 aa27.17■■□□□ 1.94
LIMS2-201ENST00000324938 USP54Q70EL1 1684 aa27.17■■□□□ 1.94
LIMS2-201ENST00000324938 FAM83GA6ND36 823 aa27.16■■□□□ 1.94
LIMS2-201ENST00000324938 RTL5Q5HYW3 569 aaPredicted RBP27.16■■□□□ 1.94
LIMS2-201ENST00000324938 SMC5Q8IY18 1101 aa27.16■■□□□ 1.94
LIMS2-201ENST00000324938 TWISTNBQ3B726 338 aaPredicted RBP27.16■■□□□ 1.94
LIMS2-201ENST00000324938 SEC24BO95487 1268 aa27.14■■□□□ 1.94
LIMS2-201ENST00000324938 HSP90AB2PQ58FF8 381 aa27.14■■□□□ 1.94
LIMS2-201ENST00000324938 DAXXQ9UER7 740 aaPredicted RBP27.14■■□□□ 1.94
LIMS2-201ENST00000324938 MARF1Q9Y4F3 1742 aaKnown RBP27.14■■□□□ 1.94
LIMS2-201ENST00000324938 ARHGEF10O15013 1369 aa27.14■■□□□ 1.94
LIMS2-201ENST00000324938 SBNO1A3KN83 1393 aa27.12■■□□□ 1.93
LIMS2-201ENST00000324938 DCTN1Q14203 1278 aa27.12■■□□□ 1.93
LIMS2-201ENST00000324938 C8orf58Q8NAV2 365 aa27.12■■□□□ 1.93
LIMS2-201ENST00000324938 CHMP4BQ9H444 224 aaKnown RBP27.12■■□□□ 1.93
LIMS2-201ENST00000324938 ABCC4O15439 1325 aa27.12■■□□□ 1.93
LIMS2-201ENST00000324938 NGDNQ8NEJ9 315 aaKnown RBP27.11■■□□□ 1.93
LIMS2-201ENST00000324938 MAP3K19Q56UN5 1328 aa27.11■■□□□ 1.93
LIMS2-201ENST00000324938 FLT4P35916 1363 aa27.11■■□□□ 1.93
LIMS2-201ENST00000324938 ZNF142P52746 1687 aaPredicted RBP27.11■■□□□ 1.93
LIMS2-201ENST00000324938 CHD2O14647 1828 aaKnown RBP27.1■■□□□ 1.93
LIMS2-201ENST00000324938 ELL2O00472 640 aaPredicted RBP27.1■■□□□ 1.93
LIMS2-201ENST00000324938 SLC4A3P48751 1232 aa27.1■■□□□ 1.93
LIMS2-201ENST00000324938 USP35Q9P2H5 1018 aa27.09■■□□□ 1.93
LIMS2-201ENST00000324938 ZBTB7BO15156 539 aaPredicted RBP27.08■■□□□ 1.93
LIMS2-201ENST00000324938 KCNA6P17658 529 aa27.07■■□□□ 1.92
LIMS2-201ENST00000324938 KDRP35968 1356 aa27.06■■□□□ 1.92
LIMS2-201ENST00000324938 SOX12O15370 315 aa27.05■■□□□ 1.92
LIMS2-201ENST00000324938 API5Q9BZZ5 524 aaKnown RBP27.05■■□□□ 1.92
LIMS2-201ENST00000324938 CHL1O00533 1208 aa27.05■■□□□ 1.92
LIMS2-201ENST00000324938 KIAA0232Q92628 1395 aa27.04■■□□□ 1.92
LIMS2-201ENST00000324938 DEKP35659 375 aaKnown RBP27.04■■□□□ 1.92
LIMS2-201ENST00000324938 UPF2Q9HAU5 1272 aaKnown RBP27.04■■□□□ 1.92
LIMS2-201ENST00000324938 HAP1P54257 671 aaPredicted RBP27.03■■□□□ 1.92
LIMS2-201ENST00000324938 NUCB1Q02818 461 aa27.03■■□□□ 1.92
LIMS2-201ENST00000324938 KIF24Q5T7B8 1368 aa27.03■■□□□ 1.92
LIMS2-201ENST00000324938 CRB1P82279 1406 aa27.02■■□□□ 1.92
LIMS2-201ENST00000324938 TBC1D32Q96NH3 1257 aa27.02■■□□□ 1.92
LIMS2-201ENST00000324938 MCM10Q7L590 875 aa27.01■■□□□ 1.91
LIMS2-201ENST00000324938 IGSF1Q8N6C5 1336 aa27.01■■□□□ 1.91
LIMS2-201ENST00000324938 TRHP20396 242 aaPredicted RBP27.01■■□□□ 1.91
LIMS2-201ENST00000324938 LRRC37A3O60309 1634 aa26.99■■□□□ 1.91
LIMS2-201ENST00000324938 AMPHP49418 695 aa26.98■■□□□ 1.91
LIMS2-201ENST00000324938 GCC1Q96CN9 775 aa26.98■■□□□ 1.91
LIMS2-201ENST00000324938 CHD1LQ86WJ1 897 aa26.97■■□□□ 1.91
LIMS2-201ENST00000324938 RGS12O14924 1447 aa26.97■■□□□ 1.91
LIMS2-201ENST00000324938 NLRP6P59044 892 aa26.96■■□□□ 1.91
LIMS2-201ENST00000324938 NWD1Q149M9 1564 aa26.95■■□□□ 1.91
LIMS2-201ENST00000324938 BECN1Q14457 450 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms