RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 ZNF853P0CG23 659 aa20.16■□□□□ 0.82
SMARCD2-202ENST00000323347 NBR1Q14596 966 aa20.16■□□□□ 0.82
SMARCD2-202ENST00000323347 PHACTR3Q96KR7 559 aa20.16■□□□□ 0.82
SMARCD2-202ENST00000323347 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
SMARCD2-202ENST00000323347 NRKQ7Z2Y5 1582 aa20.16■□□□□ 0.82
SMARCD2-202ENST00000323347 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.16■□□□□ 0.82
SMARCD2-202ENST00000323347 USP19O94966 1318 aa20.16■□□□□ 0.82
SMARCD2-202ENST00000323347 NOB1Q9ULX3 412 aaKnown RBP20.15■□□□□ 0.82
SMARCD2-202ENST00000323347 IFT57Q9NWB7 429 aa20.14■□□□□ 0.81
SMARCD2-202ENST00000323347 ZRANB1Q9UGI0 708 aa20.14■□□□□ 0.81
SMARCD2-202ENST00000323347 ARHGAP23Q9P227 1491 aa20.14■□□□□ 0.81
SMARCD2-202ENST00000323347 SLIT1O75093 1534 aa20.14■□□□□ 0.81
SMARCD2-202ENST00000323347 LTKP29376 864 aa20.13■□□□□ 0.81
SMARCD2-202ENST00000323347 NCKAP5LQ9HCH0 1330 aa20.13■□□□□ 0.81
SMARCD2-202ENST00000323347 GNAI1P63096 354 aa20.12■□□□□ 0.81
SMARCD2-202ENST00000323347 LMOD3Q0VAK6 560 aa20.12■□□□□ 0.81
SMARCD2-202ENST00000323347 CERKQ8TCT0 537 aa20.12■□□□□ 0.81
SMARCD2-202ENST00000323347 ARHGAP45Q92619 1136 aa20.12■□□□□ 0.81
SMARCD2-202ENST00000323347 ILDR2Q71H61 639 aa20.12■□□□□ 0.81
SMARCD2-202ENST00000323347 ZBTB40Q9NUA8 1239 aa20.12■□□□□ 0.81
SMARCD2-202ENST00000323347 PIK3R4Q99570 1358 aa20.11■□□□□ 0.81
SMARCD2-202ENST00000323347 OVOS2A0A0J9YW53 1432 aa20.11■□□□□ 0.81
SMARCD2-202ENST00000323347 OVOS2Q6IE36 1432 aa20.11■□□□□ 0.81
SMARCD2-202ENST00000323347 RTL5Q5HYW3 569 aaPredicted RBP20.11■□□□□ 0.81
SMARCD2-202ENST00000323347 TTC21BQ7Z4L5 1316 aa20.11■□□□□ 0.81
SMARCD2-202ENST00000323347 VAMP4O75379 141 aa20.1■□□□□ 0.81
SMARCD2-202ENST00000323347 HMOX1P09601 288 aa20.1■□□□□ 0.81
SMARCD2-202ENST00000323347 SMC5Q8IY18 1101 aa20.1■□□□□ 0.81
SMARCD2-202ENST00000323347 SSH2Q76I76 1423 aa20.1■□□□□ 0.81
SMARCD2-202ENST00000323347 PTPRUQ92729 1446 aa20.1■□□□□ 0.81
SMARCD2-202ENST00000323347 DEKP35659 375 aaKnown RBP20.1■□□□□ 0.81
SMARCD2-202ENST00000323347 TMEM57Q8N5G2 664 aa20.1■□□□□ 0.81
SMARCD2-202ENST00000323347 USP31Q70CQ4 1352 aa20.09■□□□□ 0.81
SMARCD2-202ENST00000323347 NALCNQ8IZF0 1738 aa20.09■□□□□ 0.81
SMARCD2-202ENST00000323347 USP6P35125 1406 aa20.08■□□□□ 0.81
SMARCD2-202ENST00000323347 PTCH1Q13635 1447 aa20.08■□□□□ 0.81
SMARCD2-202ENST00000323347 TBX22Q9Y458 520 aa20.08■□□□□ 0.81
SMARCD2-202ENST00000323347 ITPRIPQ8IWB1 547 aa20.08■□□□□ 0.8
SMARCD2-202ENST00000323347 MRPL50Q8N5N7 158 aaKnown RBP20.08■□□□□ 0.8
SMARCD2-202ENST00000323347 CFAP44Q96MT7 982 aa20.08■□□□□ 0.8
SMARCD2-202ENST00000323347 ACEP12821 1306 aa20.07■□□□□ 0.8
SMARCD2-202ENST00000323347 RRS1Q15050 365 aaKnown RBP20.06■□□□□ 0.8
SMARCD2-202ENST00000323347 DIP2AQ14689 1571 aa20.06■□□□□ 0.8
SMARCD2-202ENST00000323347 SEC24BO95487 1268 aa20.06■□□□□ 0.8
SMARCD2-202ENST00000323347 CHMP4BQ9H444 224 aaKnown RBP20.06■□□□□ 0.8
SMARCD2-202ENST00000323347 EID1Q9Y6B2 187 aa20.06■□□□□ 0.8
SMARCD2-202ENST00000323347 DAXXQ9UER7 740 aaPredicted RBP20.05■□□□□ 0.8
SMARCD2-202ENST00000323347 LAS1LQ9Y4W2 734 aaKnown RBP20.05■□□□□ 0.8
SMARCD2-202ENST00000323347 DLG5Q8TDM6 1919 aa20.05■□□□□ 0.8
SMARCD2-202ENST00000323347 MBIPQ9NS73 344 aa20.04■□□□□ 0.8
SMARCD2-202ENST00000323347 RGPD1P0DJD0 1748 aa20.03■□□□□ 0.8
SMARCD2-202ENST00000323347 HSPA2P54652 639 aa20.03■□□□□ 0.8
SMARCD2-202ENST00000323347 EIF4A2Q14240 407 aaKnown RBP20.03■□□□□ 0.8
SMARCD2-202ENST00000323347 TTC21AQ8NDW8 1320 aa20.03■□□□□ 0.8
SMARCD2-202ENST00000323347 THUMPD2Q9BTF0 503 aaKnown RBP20.02■□□□□ 0.8
SMARCD2-202ENST00000323347 ZBTB7BO15156 539 aaPredicted RBP20.01■□□□□ 0.79
SMARCD2-202ENST00000323347 TSPYL6Q8N831 410 aa20.01■□□□□ 0.79
SMARCD2-202ENST00000323347 ABCC4O15439 1325 aa20.01■□□□□ 0.79
SMARCD2-202ENST00000323347 RIMS1Q86UR5 1692 aaKnown RBP20.01■□□□□ 0.79
SMARCD2-202ENST00000323347 KIF24Q5T7B8 1368 aa20■□□□□ 0.79
SMARCD2-202ENST00000323347 SLC4A3P48751 1232 aa20■□□□□ 0.79
SMARCD2-202ENST00000323347 TBC1D32Q96NH3 1257 aa20■□□□□ 0.79
SMARCD2-202ENST00000323347 PEAK1Q9H792 1746 aa20■□□□□ 0.79
SMARCD2-202ENST00000323347 AMOTL2Q9Y2J4 779 aa20■□□□□ 0.79
SMARCD2-202ENST00000323347 CEBPAP49715 358 aaPredicted RBP19.99■□□□□ 0.79
SMARCD2-202ENST00000323347 TWISTNBQ3B726 338 aaPredicted RBP19.99■□□□□ 0.79
SMARCD2-202ENST00000323347 NUCB1Q02818 461 aa19.98■□□□□ 0.79
SMARCD2-202ENST00000323347 THEMISQ8N1K5 641 aaPredicted RBP19.98■□□□□ 0.79
SMARCD2-202ENST00000323347 SLC26A8Q96RN1 970 aa19.98■□□□□ 0.79
SMARCD2-202ENST00000323347 UPF2Q9HAU5 1272 aaKnown RBP19.98■□□□□ 0.79
SMARCD2-202ENST00000323347 XRN1Q8IZH2 1706 aaKnown RBP19.97■□□□□ 0.79
SMARCD2-202ENST00000323347 C8orf58Q8NAV2 365 aa19.97■□□□□ 0.79
SMARCD2-202ENST00000323347 ARHGEF10O15013 1369 aa19.96■□□□□ 0.79
SMARCD2-202ENST00000323347 HAP1P54257 671 aaPredicted RBP19.96■□□□□ 0.79
SMARCD2-202ENST00000323347 BECN1Q14457 450 aa19.96■□□□□ 0.79
SMARCD2-202ENST00000323347 API5Q9BZZ5 524 aaKnown RBP19.96■□□□□ 0.79
SMARCD2-202ENST00000323347 KIAA0232Q92628 1395 aa19.95■□□□□ 0.78
SMARCD2-202ENST00000323347 FER1L4A9Z1Z3 1794 aa19.95■□□□□ 0.78
SMARCD2-202ENST00000323347 CHL1O00533 1208 aa19.95■□□□□ 0.78
SMARCD2-202ENST00000323347 NFKBIBQ15653 356 aa19.95■□□□□ 0.78
SMARCD2-202ENST00000323347 SULT6B1Q6IMI4 303 aa19.95■□□□□ 0.78
SMARCD2-202ENST00000323347 ANKARQ7Z5J8 1434 aa19.95■□□□□ 0.78
SMARCD2-202ENST00000323347 AEBP1Q8IUX7 1158 aa19.94■□□□□ 0.78
SMARCD2-202ENST00000323347 GCC1Q96CN9 775 aa19.94■□□□□ 0.78
SMARCD2-202ENST00000323347 FAM83GA6ND36 823 aa19.94■□□□□ 0.78
SMARCD2-202ENST00000323347 SBNO1A3KN83 1393 aa19.92■□□□□ 0.78
SMARCD2-202ENST00000323347 HSP90AB2PQ58FF8 381 aa19.92■□□□□ 0.78
SMARCD2-202ENST00000323347 KDRP35968 1356 aa19.92■□□□□ 0.78
SMARCD2-202ENST00000323347 USP54Q70EL1 1684 aa19.91■□□□□ 0.78
SMARCD2-202ENST00000323347 CHD1LQ86WJ1 897 aa19.91■□□□□ 0.78
SMARCD2-202ENST00000323347 CRB1P82279 1406 aa19.91■□□□□ 0.78
SMARCD2-202ENST00000323347 FLT4P35916 1363 aa19.91■□□□□ 0.78
SMARCD2-202ENST00000323347 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
SMARCD2-202ENST00000323347 MAP3K19Q56UN5 1328 aa19.9■□□□□ 0.78
SMARCD2-202ENST00000323347 DCTN1Q14203 1278 aa19.9■□□□□ 0.78
SMARCD2-202ENST00000323347 FMN2Q9NZ56 1722 aa19.9■□□□□ 0.78
SMARCD2-202ENST00000323347 INTS3Q68E01 1043 aaKnown RBP19.89■□□□□ 0.77
SMARCD2-202ENST00000323347 ELL2O00472 640 aaPredicted RBP19.88■□□□□ 0.77
SMARCD2-202ENST00000323347 NUTM2FA1L443 756 aa19.88■□□□□ 0.77
SMARCD2-202ENST00000323347 PIK3C2AO00443 1686 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms