RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 TTC21BQ7Z4L5 1316 aa15.45■□□□□ 0.06
NCL-201ENST00000322723 FAM208AQ9UK61 1670 aaKnown RBP15.45■□□□□ 0.06
NCL-201ENST00000322723 SKAP1Q86WV1 359 aa15.44■□□□□ 0.06
NCL-201ENST00000322723 MVPQ14764 893 aaKnown RBP15.44■□□□□ 0.06
NCL-201ENST00000322723 TRPM3Q9HCF6 1732 aaPredicted RBP15.44■□□□□ 0.06
NCL-201ENST00000322723 ESF1Q9H501 851 aaKnown RBP15.44■□□□□ 0.06
NCL-201ENST00000322723 TNNQ9UQP3 1299 aa15.44■□□□□ 0.06
NCL-201ENST00000322723 NCKAP5LQ9HCH0 1330 aa15.44■□□□□ 0.06
NCL-201ENST00000322723 TTC21AQ8NDW8 1320 aa15.43■□□□□ 0.06
NCL-201ENST00000322723 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
NCL-201ENST00000322723 GLIPR1L2Q4G1C9 344 aa15.43■□□□□ 0.06
NCL-201ENST00000322723 EMILIN1Q9Y6C2 1016 aa15.43■□□□□ 0.06
NCL-201ENST00000322723 KDRP35968 1356 aa15.43■□□□□ 0.06
NCL-201ENST00000322723 KIF24Q5T7B8 1368 aa15.43■□□□□ 0.06
NCL-201ENST00000322723 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
NCL-201ENST00000322723 ARHGEF10O15013 1369 aa15.42■□□□□ 0.06
NCL-201ENST00000322723 MAPK8IP3Q9UPT6 1336 aa15.42■□□□□ 0.06
NCL-201ENST00000322723 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
NCL-201ENST00000322723 NFAT5O94916 1531 aa15.42■□□□□ 0.06
NCL-201ENST00000322723 PCDHB15Q9Y5E8 787 aa15.42■□□□□ 0.06
NCL-201ENST00000322723 RIPK4P57078 832 aa15.42■□□□□ 0.06
NCL-201ENST00000322723 EXOSC9Q06265 439 aaKnown RBP15.42■□□□□ 0.06
NCL-201ENST00000322723 MED1Q15648 1581 aaPredicted RBP15.41■□□□□ 0.06
NCL-201ENST00000322723 PHACTR3Q96KR7 559 aa15.41■□□□□ 0.06
NCL-201ENST00000322723 COG6Q9Y2V7 657 aa15.41■□□□□ 0.06
NCL-201ENST00000322723 ACEP12821 1306 aa15.41■□□□□ 0.06
NCL-201ENST00000322723 TSR2Q969E8 191 aaKnown RBP15.41■□□□□ 0.06
NCL-201ENST00000322723 IFT57Q9NWB7 429 aa15.41■□□□□ 0.06
NCL-201ENST00000322723 CACNA1FO60840 1977 aa15.4■□□□□ 0.06
NCL-201ENST00000322723 PRKAR2BP31323 418 aa15.4■□□□□ 0.06
NCL-201ENST00000322723 NEUROD2Q15784 382 aa15.4■□□□□ 0.06
NCL-201ENST00000322723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.06
NCL-201ENST00000322723 USP19O94966 1318 aa15.4■□□□□ 0.06
NCL-201ENST00000322723 ZKSCAN2Q63HK3 967 aa15.4■□□□□ 0.06
NCL-201ENST00000322723 PMFBP1Q8TBY8 1022 aa15.4■□□□□ 0.06
NCL-201ENST00000322723 SSH1Q8WYL5 1049 aa15.4■□□□□ 0.06
NCL-201ENST00000322723 U2SURPO15042 1029 aaKnown RBP15.4■□□□□ 0.06
NCL-201ENST00000322723 HDAC1Q13547 482 aaPredicted RBP15.4■□□□□ 0.06
NCL-201ENST00000322723 COG3Q96JB2 828 aa15.39■□□□□ 0.05
NCL-201ENST00000322723 TUBGCP6Q96RT7 1819 aa15.39■□□□□ 0.05
NCL-201ENST00000322723 TRIM27P14373 513 aa15.39■□□□□ 0.05
NCL-201ENST00000322723 LMO7Q8WWI1 1683 aa15.39■□□□□ 0.05
NCL-201ENST00000322723 CRB1P82279 1406 aa15.39■□□□□ 0.05
NCL-201ENST00000322723 RGS12O14924 1447 aa15.38■□□□□ 0.05
NCL-201ENST00000322723 MST1RQ04912 1400 aa15.38■□□□□ 0.05
NCL-201ENST00000322723 SETD1BQ9UPS6 1966 aaKnown RBP15.38■□□□□ 0.05
NCL-201ENST00000322723 ADAMTS7Q9UKP4 1686 aa15.38■□□□□ 0.05
NCL-201ENST00000322723 CRYBG1Q9Y4K1 1723 aa15.38■□□□□ 0.05
NCL-201ENST00000322723 FBLN1P23142 703 aa15.38■□□□□ 0.05
NCL-201ENST00000322723 ARHGAP45Q92619 1136 aa15.38■□□□□ 0.05
NCL-201ENST00000322723 LMTK3Q96Q04 1460 aa15.38■□□□□ 0.05
NCL-201ENST00000322723 KDM3BQ7LBC6 1761 aa15.38■□□□□ 0.05
NCL-201ENST00000322723 KIF16BQ96L93 1317 aa15.37■□□□□ 0.05
NCL-201ENST00000322723 ATF7IPQ6VMQ6 1270 aa15.37■□□□□ 0.05
NCL-201ENST00000322723 DZIP1LQ8IYY4 767 aaKnown RBP15.37■□□□□ 0.05
NCL-201ENST00000322723 SBNO1A3KN83 1393 aa15.37■□□□□ 0.05
NCL-201ENST00000322723 CEBPAP49715 358 aaPredicted RBP15.37■□□□□ 0.05
NCL-201ENST00000322723 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
NCL-201ENST00000322723 NCAPD2Q15021 1401 aa15.36■□□□□ 0.05
NCL-201ENST00000322723 SLIT3O75094 1523 aa15.36■□□□□ 0.05
NCL-201ENST00000322723 VAMP4O75379 141 aa15.36■□□□□ 0.05
NCL-201ENST00000322723 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
NCL-201ENST00000322723 AMOTL2Q9Y2J4 779 aa15.36■□□□□ 0.05
NCL-201ENST00000322723 ABCC4O15439 1325 aa15.36■□□□□ 0.05
NCL-201ENST00000322723 CALD1Q05682 793 aaKnown RBP15.35■□□□□ 0.05
NCL-201ENST00000322723 EIF4A2Q14240 407 aaKnown RBP15.35■□□□□ 0.05
NCL-201ENST00000322723 EID1Q9Y6B2 187 aa15.35■□□□□ 0.05
NCL-201ENST00000322723 KIF1AQ12756 1690 aa15.35■□□□□ 0.05
NCL-201ENST00000322723 SIPA1L3O60292 1781 aaPredicted RBP15.35■□□□□ 0.05
NCL-201ENST00000322723 ZBTB40Q9NUA8 1239 aa15.35■□□□□ 0.05
NCL-201ENST00000322723 KIAA0232Q92628 1395 aa15.35■□□□□ 0.05
NCL-201ENST00000322723 MRPL50Q8N5N7 158 aaKnown RBP15.35■□□□□ 0.05
NCL-201ENST00000322723 CFAP44Q96MT7 982 aa15.34■□□□□ 0.05
NCL-201ENST00000322723 ALS2Q96Q42 1657 aa15.34■□□□□ 0.05
NCL-201ENST00000322723 SMC5Q8IY18 1101 aa15.33■□□□□ 0.04
NCL-201ENST00000322723 RGPD2P0DJD1 1756 aa15.33■□□□□ 0.04
NCL-201ENST00000322723 LMOD3Q0VAK6 560 aa15.33■□□□□ 0.04
NCL-201ENST00000322723 DDX19BQ9UMR2 479 aa15.33■□□□□ 0.04
NCL-201ENST00000322723 RTL1A6NKG5 1358 aa15.32■□□□□ 0.04
NCL-201ENST00000322723 FLT4P35916 1363 aa15.32■□□□□ 0.04
NCL-201ENST00000322723 GNAI1P63096 354 aa15.32■□□□□ 0.04
NCL-201ENST00000322723 NOB1Q9ULX3 412 aaKnown RBP15.32■□□□□ 0.04
NCL-201ENST00000322723 ADGRL3Q9HAR2 1447 aa15.32■□□□□ 0.04
NCL-201ENST00000322723 MBIPQ9NS73 344 aa15.32■□□□□ 0.04
NCL-201ENST00000322723 IGSF1Q8N6C5 1336 aa15.31■□□□□ 0.04
NCL-201ENST00000322723 RRS1Q15050 365 aaKnown RBP15.31■□□□□ 0.04
NCL-201ENST00000322723 FRAT1Q92837 279 aaPredicted RBP15.31■□□□□ 0.04
NCL-201ENST00000322723 SMC4Q9NTJ3 1288 aa15.31■□□□□ 0.04
NCL-201ENST00000322723 BCL2L13Q9BXK5 485 aa15.31■□□□□ 0.04
NCL-201ENST00000322723 DDRGK1Q96HY6 314 aa15.3■□□□□ 0.04
NCL-201ENST00000322723 RWDD1Q9H446 243 aaPredicted RBP15.3■□□□□ 0.04
NCL-201ENST00000322723 ABCC6O95255 1503 aa15.29■□□□□ 0.04
NCL-201ENST00000322723 STRCP1A6NGW2 1772 aa15.29■□□□□ 0.04
NCL-201ENST00000322723 HMOX1P09601 288 aa15.29■□□□□ 0.04
NCL-201ENST00000322723 CANXP27824 592 aaKnown RBP15.29■□□□□ 0.04
NCL-201ENST00000322723 TMEM57Q8N5G2 664 aa15.29■□□□□ 0.04
NCL-201ENST00000322723 SLC26A8Q96RN1 970 aa15.29■□□□□ 0.04
NCL-201ENST00000322723 PDZRN3Q9UPQ7 1066 aa15.29■□□□□ 0.04
NCL-201ENST00000322723 CHL1O00533 1208 aa15.28■□□□□ 0.04
NCL-201ENST00000322723 MAP3K19Q56UN5 1328 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms