RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 SF3A1Q15459 793 aaKnown RBP19.86■□□□□ 0.77
SFXN1-201ENST00000321442 NUTM2AQ8IVF1 878 aaPredicted RBP19.86■□□□□ 0.77
SFXN1-201ENST00000321442 RNF123Q5XPI4 1314 aa19.86■□□□□ 0.77
SFXN1-201ENST00000321442 YEATS2Q9ULM3 1422 aa19.86■□□□□ 0.77
SFXN1-201ENST00000321442 FYB1O15117 783 aa19.86■□□□□ 0.77
SFXN1-201ENST00000321442 PLEKHH1Q9ULM0 1364 aa19.86■□□□□ 0.77
SFXN1-201ENST00000321442 PIP4K2BP78356 416 aa19.86■□□□□ 0.77
SFXN1-201ENST00000321442 BICD2Q8TD16 824 aa19.86■□□□□ 0.77
SFXN1-201ENST00000321442 CHD1O14646 1710 aa19.85■□□□□ 0.77
SFXN1-201ENST00000321442 MBD3O95983 291 aa19.85■□□□□ 0.77
SFXN1-201ENST00000321442 ZSCAN30Q86W11 494 aa19.85■□□□□ 0.77
SFXN1-201ENST00000321442 TTC5Q8N0Z6 440 aa19.85■□□□□ 0.77
SFXN1-201ENST00000321442 DDX54Q8TDD1 881 aaKnown RBP19.85■□□□□ 0.77
SFXN1-201ENST00000321442 KAT6BQ8WYB5 2073 aa19.85■□□□□ 0.77
SFXN1-201ENST00000321442 PER1O15534 1290 aaPredicted RBP19.85■□□□□ 0.77
SFXN1-201ENST00000321442 ZKSCAN1P17029 563 aaPredicted RBP19.85■□□□□ 0.77
SFXN1-201ENST00000321442 ZNF771Q7L3S4 317 aaPredicted RBP19.85■□□□□ 0.77
SFXN1-201ENST00000321442 FAM184AQ8NB25 1140 aa19.84■□□□□ 0.77
SFXN1-201ENST00000321442 IFT57Q9NWB7 429 aa19.84■□□□□ 0.77
SFXN1-201ENST00000321442 TNRQ92752 1358 aa19.84■□□□□ 0.77
SFXN1-201ENST00000321442 ACEP12821 1306 aa19.84■□□□□ 0.77
SFXN1-201ENST00000321442 PARD3Q8TEW0 1356 aa19.84■□□□□ 0.77
SFXN1-201ENST00000321442 SYCE3A1L190 88 aa19.84■□□□□ 0.77
SFXN1-201ENST00000321442 RLBP1P12271 317 aa19.83■□□□□ 0.77
SFXN1-201ENST00000321442 HSP90AB2PQ58FF8 381 aa19.83■□□□□ 0.77
SFXN1-201ENST00000321442 FOSBP53539 338 aa19.83■□□□□ 0.76
SFXN1-201ENST00000321442 C9orf78Q9NZ63 289 aaPredicted RBP19.83■□□□□ 0.76
SFXN1-201ENST00000321442 SPC24Q8NBT2 197 aa19.82■□□□□ 0.76
SFXN1-201ENST00000321442 UQCRHLA0A096LP55 91 aa19.82■□□□□ 0.76
SFXN1-201ENST00000321442 SLC4A2P04920 1241 aa19.82■□□□□ 0.76
SFXN1-201ENST00000321442 UQCRHP07919 91 aa19.82■□□□□ 0.76
SFXN1-201ENST00000321442 TSPY26PQ9H489 355 aa19.82■□□□□ 0.76
SFXN1-201ENST00000321442 CT47B1P0C2W7 299 aaPredicted RBP19.82■□□□□ 0.76
SFXN1-201ENST00000321442 ZMYM3Q14202 1370 aa19.82■□□□□ 0.76
SFXN1-201ENST00000321442 ABCA8O94911 1581 aa19.81■□□□□ 0.76
SFXN1-201ENST00000321442 SURF6O75683 361 aaKnown RBP19.81■□□□□ 0.76
SFXN1-201ENST00000321442 ZNF530Q6P9A1 599 aaPredicted RBP19.81■□□□□ 0.76
SFXN1-201ENST00000321442 GORABQ5T7V8 394 aa19.81■□□□□ 0.76
SFXN1-201ENST00000321442 RALGAPBQ86X10 1494 aa19.8■□□□□ 0.76
SFXN1-201ENST00000321442 PHF8Q9UPP1 1060 aa19.8■□□□□ 0.76
SFXN1-201ENST00000321442 TULP1O00294 542 aaPredicted RBP19.8■□□□□ 0.76
SFXN1-201ENST00000321442 MAP7D2Q96T17 732 aa19.8■□□□□ 0.76
SFXN1-201ENST00000321442 UPF3BQ9BZI7 483 aaKnown RBP19.8■□□□□ 0.76
SFXN1-201ENST00000321442 PRDM11Q9NQV5 511 aa19.8■□□□□ 0.76
SFXN1-201ENST00000321442 FAM177BA6PVY3 158 aa19.79■□□□□ 0.76
SFXN1-201ENST00000321442 SMARCA5O60264 1052 aaPredicted RBP19.79■□□□□ 0.76
SFXN1-201ENST00000321442 IFIT2P09913 472 aaKnown RBP19.79■□□□□ 0.76
SFXN1-201ENST00000321442 TAF7LQ5H9L4 462 aa19.79■□□□□ 0.76
SFXN1-201ENST00000321442 RUFY2Q8WXA3 655 aa19.79■□□□□ 0.76
SFXN1-201ENST00000321442 ERC2O15083 957 aa19.79■□□□□ 0.76
SFXN1-201ENST00000321442 KCNA6P17658 529 aa19.78■□□□□ 0.76
SFXN1-201ENST00000321442 TTC37Q6PGP7 1564 aa19.78■□□□□ 0.76
SFXN1-201ENST00000321442 TNNT3P45378 269 aaPredicted RBP19.78■□□□□ 0.76
SFXN1-201ENST00000321442 CHRNA2Q15822 529 aa19.78■□□□□ 0.76
SFXN1-201ENST00000321442 AEBP1Q8IUX7 1158 aa19.78■□□□□ 0.76
SFXN1-201ENST00000321442 RBM42Q9BTD8 480 aaKnown RBP19.78■□□□□ 0.76
SFXN1-201ENST00000321442 TEX14Q8IWB6 1497 aa19.78■□□□□ 0.76
SFXN1-201ENST00000321442 TOM1L2Q6ZVM7 507 aa19.78■□□□□ 0.76
SFXN1-201ENST00000321442 CWC22Q9HCG8 908 aaKnown RBP19.78■□□□□ 0.76
SFXN1-201ENST00000321442 CCAR2Q8N163 923 aaKnown RBP19.77■□□□□ 0.76
SFXN1-201ENST00000321442 UBE2Q2Q8WVN8 375 aa19.77■□□□□ 0.76
SFXN1-201ENST00000321442 ATP7AQ04656 1500 aa19.77■□□□□ 0.76
SFXN1-201ENST00000321442 SHANK2Q9UPX8 1470 aa19.77■□□□□ 0.76
SFXN1-201ENST00000321442 MAP4K4O95819 1239 aaPredicted RBP19.77■□□□□ 0.76
SFXN1-201ENST00000321442 CREBRFQ8IUR6 639 aa19.77■□□□□ 0.76
SFXN1-201ENST00000321442 UBTFL1P0CB47 393 aaPredicted RBP19.77■□□□□ 0.75
SFXN1-201ENST00000321442 RRAGDQ9NQL2 400 aaPredicted RBP19.77■□□□□ 0.75
SFXN1-201ENST00000321442 HDAC5Q9UQL6 1122 aa19.76■□□□□ 0.75
SFXN1-201ENST00000321442 EXOC6BQ9Y2D4 811 aa19.76■□□□□ 0.75
SFXN1-201ENST00000321442 TPM4P67936 248 aa19.76■□□□□ 0.75
SFXN1-201ENST00000321442 GTF2E1P29083 439 aaPredicted RBP19.76■□□□□ 0.75
SFXN1-201ENST00000321442 ARHGEF12Q9NZN5 1544 aa19.76■□□□□ 0.75
SFXN1-201ENST00000321442 UHRF1BP1LA0JNW5 1464 aa19.75■□□□□ 0.75
SFXN1-201ENST00000321442 CABLES1Q8TDN4 633 aa19.75■□□□□ 0.75
SFXN1-201ENST00000321442 CHMP4AQ9BY43 222 aa19.75■□□□□ 0.75
SFXN1-201ENST00000321442 ADGRL2O95490 1459 aa19.75■□□□□ 0.75
SFXN1-201ENST00000321442 FCHSD2O94868 740 aa19.75■□□□□ 0.75
SFXN1-201ENST00000321442 UGGT1Q9NYU2 1555 aa19.75■□□□□ 0.75
SFXN1-201ENST00000321442 RIMS2Q9UQ26 1411 aa19.75■□□□□ 0.75
SFXN1-201ENST00000321442 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
SFXN1-201ENST00000321442 TBC1D9Q6ZT07 1266 aa19.75■□□□□ 0.75
SFXN1-201ENST00000321442 TRIM5Q9C035 493 aa19.75■□□□□ 0.75
SFXN1-201ENST00000321442 A0A0U1RQG5 324 aaPredicted RBP19.74■□□□□ 0.75
SFXN1-201ENST00000321442 SASS6Q6UVJ0 657 aa19.74■□□□□ 0.75
SFXN1-201ENST00000321442 IL1RAPL2Q9NP60 686 aa19.74■□□□□ 0.75
SFXN1-201ENST00000321442 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
SFXN1-201ENST00000321442 CLCN1P35523 988 aa19.74■□□□□ 0.75
SFXN1-201ENST00000321442 HDGFL1Q5TGJ6 251 aa19.74■□□□□ 0.75
SFXN1-201ENST00000321442 GDPD2Q9HCC8 539 aa19.73■□□□□ 0.75
SFXN1-201ENST00000321442 MYL6BP14649 208 aa19.73■□□□□ 0.75
SFXN1-201ENST00000321442 NFE2L2Q16236 605 aa19.73■□□□□ 0.75
SFXN1-201ENST00000321442 SAMD9LQ8IVG5 1584 aa19.72■□□□□ 0.75
SFXN1-201ENST00000321442 MPRIPQ6WCQ1 1025 aa19.72■□□□□ 0.75
SFXN1-201ENST00000321442 GAS2L2Q8NHY3 880 aa19.72■□□□□ 0.75
SFXN1-201ENST00000321442 ZMYND15Q9H091 742 aa19.72■□□□□ 0.75
SFXN1-201ENST00000321442 BAG4O95429 457 aaKnown RBP19.72■□□□□ 0.75
SFXN1-201ENST00000321442 MCM2P49736 904 aa19.72■□□□□ 0.75
SFXN1-201ENST00000321442 MTERF4Q7Z6M4 381 aaKnown RBP19.72■□□□□ 0.75
SFXN1-201ENST00000321442 KIF3AQ9Y496 699 aa19.72■□□□□ 0.75
SFXN1-201ENST00000321442 PRDM10Q9NQV6 1147 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms