RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 L1TD1Q5T7N2 865 aaKnown RBP10.95□□□□□ -0.66
CLK1-201ENST00000321356 FAM43AQ8N2R8 423 aa10.95□□□□□ -0.66
CLK1-201ENST00000321356 SNX21Q969T3 373 aa10.95□□□□□ -0.66
CLK1-201ENST00000321356 PHACTR3Q96KR7 559 aa10.95□□□□□ -0.66
CLK1-201ENST00000321356 IFT57Q9NWB7 429 aa10.95□□□□□ -0.66
CLK1-201ENST00000321356 ABCC4O15439 1325 aa10.95□□□□□ -0.66
CLK1-201ENST00000321356 RIMS2Q9UQ26 1411 aa10.95□□□□□ -0.66
CLK1-201ENST00000321356 KNDC1Q76NI1 1749 aa10.94□□□□□ -0.66
CLK1-201ENST00000321356 IL13P35225 146 aa10.94□□□□□ -0.66
CLK1-201ENST00000321356 MAPK8IP2Q13387 824 aaPredicted RBP10.94□□□□□ -0.66
CLK1-201ENST00000321356 GCC1Q96CN9 775 aa10.94□□□□□ -0.66
CLK1-201ENST00000321356 LNPKQ9C0E8 428 aa10.94□□□□□ -0.66
CLK1-201ENST00000321356 CHMP4BQ9H444 224 aaKnown RBP10.94□□□□□ -0.66
CLK1-201ENST00000321356 FSD2A1L4K1 749 aa10.93□□□□□ -0.66
CLK1-201ENST00000321356 GNAI1P63096 354 aa10.93□□□□□ -0.66
CLK1-201ENST00000321356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLK1-201ENST00000321356 ANO8Q9HCE9 1232 aaPredicted RBP10.93□□□□□ -0.66
CLK1-201ENST00000321356 AKAP12Q02952 1782 aa10.93□□□□□ -0.66
CLK1-201ENST00000321356 FBLN1P23142 703 aa10.93□□□□□ -0.66
CLK1-201ENST00000321356 WAPLQ7Z5K2 1190 aa10.93□□□□□ -0.66
CLK1-201ENST00000321356 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
CLK1-201ENST00000321356 NRKQ7Z2Y5 1582 aa10.93□□□□□ -0.66
CLK1-201ENST00000321356 C3P01024 1663 aa10.93□□□□□ -0.66
CLK1-201ENST00000321356 TSPYL6Q8N831 410 aa10.92□□□□□ -0.66
CLK1-201ENST00000321356 EMILIN1Q9Y6C2 1016 aa10.92□□□□□ -0.66
CLK1-201ENST00000321356 CPS1P31327 1500 aa10.92□□□□□ -0.66
CLK1-201ENST00000321356 KIF24Q5T7B8 1368 aa10.91□□□□□ -0.66
CLK1-201ENST00000321356 HMOX1P09601 288 aa10.91□□□□□ -0.66
CLK1-201ENST00000321356 SIRT2Q8IXJ6 389 aa10.91□□□□□ -0.66
CLK1-201ENST00000321356 SPRYD3Q8NCJ5 442 aa10.91□□□□□ -0.66
CLK1-201ENST00000321356 THUMPD2Q9BTF0 503 aaKnown RBP10.91□□□□□ -0.66
CLK1-201ENST00000321356 MBIPQ9NS73 344 aa10.91□□□□□ -0.66
CLK1-201ENST00000321356 STAG3Q9UJ98 1225 aa10.91□□□□□ -0.66
CLK1-201ENST00000321356 TECPR2O15040 1411 aa10.91□□□□□ -0.66
CLK1-201ENST00000321356 WASLO00401 505 aaPredicted RBP10.91□□□□□ -0.66
CLK1-201ENST00000321356 CFAP44Q96MT7 982 aa10.91□□□□□ -0.66
CLK1-201ENST00000321356 KIF2CQ99661 725 aa10.91□□□□□ -0.66
CLK1-201ENST00000321356 ITSN1Q15811 1721 aa10.91□□□□□ -0.66
CLK1-201ENST00000321356 DIP2BQ9P265 1576 aa10.9□□□□□ -0.66
CLK1-201ENST00000321356 LMOD3Q0VAK6 560 aa10.9□□□□□ -0.66
CLK1-201ENST00000321356 NME9Q86XW9 330 aa10.9□□□□□ -0.66
CLK1-201ENST00000321356 CIZ1Q9ULV3 898 aaPredicted RBP10.9□□□□□ -0.66
CLK1-201ENST00000321356 ANKRD45Q5TZF3 282 aa10.89□□□□□ -0.67
CLK1-201ENST00000321356 DDX11L8A8MPP1 907 aa10.89□□□□□ -0.67
CLK1-201ENST00000321356 TRAK2O60296 914 aa10.89□□□□□ -0.67
CLK1-201ENST00000321356 TWISTNBQ3B726 338 aaPredicted RBP10.89□□□□□ -0.67
CLK1-201ENST00000321356 SIRT1Q96EB6 747 aa10.89□□□□□ -0.67
CLK1-201ENST00000321356 API5Q9BZZ5 524 aaKnown RBP10.89□□□□□ -0.67
CLK1-201ENST00000321356 METP08581 1390 aa10.88□□□□□ -0.67
CLK1-201ENST00000321356 GOLGA6L3A6NEY3 463 aa10.88□□□□□ -0.67
CLK1-201ENST00000321356 XRCC6P12956 609 aaKnown RBP eCLIP10.88□□□□□ -0.67
CLK1-201ENST00000321356 C8orf58Q8NAV2 365 aa10.88□□□□□ -0.67
CLK1-201ENST00000321356 C1orf115Q9H7X2 142 aa10.88□□□□□ -0.67
CLK1-201ENST00000321356 TBC1D9Q6ZT07 1266 aa10.87□□□□□ -0.67
CLK1-201ENST00000321356 ZRANB1Q9UGI0 708 aa10.87□□□□□ -0.67
CLK1-201ENST00000321356 NUDT16Q96DE0 195 aaKnown RBP10.87□□□□□ -0.67
CLK1-201ENST00000321356 COG3Q96JB2 828 aa10.87□□□□□ -0.67
CLK1-201ENST00000321356 RGS12O14924 1447 aa10.86□□□□□ -0.67
CLK1-201ENST00000321356 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLK1-201ENST00000321356 CCDC61Q9Y6R9 512 aa10.86□□□□□ -0.67
CLK1-201ENST00000321356 RGPD1P0DJD0 1748 aa10.86□□□□□ -0.67
CLK1-201ENST00000321356 NALCNQ8IZF0 1738 aa10.86□□□□□ -0.67
CLK1-201ENST00000321356 TOPAZ1Q8N9V7 1692 aa10.85□□□□□ -0.67
CLK1-201ENST00000321356 ATP10DQ9P241 1426 aa10.85□□□□□ -0.67
CLK1-201ENST00000321356 ELL2O00472 640 aaPredicted RBP10.85□□□□□ -0.67
CLK1-201ENST00000321356 RAB3GAP1Q15042 981 aa10.85□□□□□ -0.67
CLK1-201ENST00000321356 INTS3Q68E01 1043 aaKnown RBP10.85□□□□□ -0.67
CLK1-201ENST00000321356 ISY1Q9ULR0 285 aaKnown RBP10.85□□□□□ -0.67
CLK1-201ENST00000321356 CDC45O75419 566 aa10.85□□□□□ -0.67
CLK1-201ENST00000321356 TNPO1Q92973 898 aaKnown RBP10.85□□□□□ -0.67
CLK1-201ENST00000321356 DCTPP1Q9H773 170 aa10.85□□□□□ -0.67
CLK1-201ENST00000321356 TSPOAP1O95153 1857 aa10.84□□□□□ -0.67
CLK1-201ENST00000321356 FAM83GA6ND36 823 aa10.84□□□□□ -0.67
CLK1-201ENST00000321356 K7ELQ4 463 aaPredicted RBP10.84□□□□□ -0.67
CLK1-201ENST00000321356 CD2BP2O95400 341 aaKnown RBP10.84□□□□□ -0.67
CLK1-201ENST00000321356 HSP90AB1P08238 724 aaKnown RBP10.84□□□□□ -0.67
CLK1-201ENST00000321356 RRS1Q15050 365 aaKnown RBP10.84□□□□□ -0.67
CLK1-201ENST00000321356 GZF1Q9H116 711 aaPredicted RBP10.84□□□□□ -0.67
CLK1-201ENST00000321356 KIAA0232Q92628 1395 aa10.84□□□□□ -0.67
CLK1-201ENST00000321356 PRR36Q9H6K5 1346 aa10.84□□□□□ -0.67
CLK1-201ENST00000321356 EIF5BO60841 1220 aaKnown RBP10.83□□□□□ -0.68
CLK1-201ENST00000321356 GSPT1P15170 499 aaKnown RBP10.83□□□□□ -0.68
CLK1-201ENST00000321356 MRE11P49959 708 aa10.83□□□□□ -0.68
CLK1-201ENST00000321356 TXNDC2Q86VQ3 553 aa10.83□□□□□ -0.68
CLK1-201ENST00000321356 PLEKHM2Q8IWE5 1019 aa10.83□□□□□ -0.68
CLK1-201ENST00000321356 RRAGDQ9NQL2 400 aaPredicted RBP10.83□□□□□ -0.68
CLK1-201ENST00000321356 OVOS2A0A0J9YW53 1432 aa10.83□□□□□ -0.68
CLK1-201ENST00000321356 OVOS2Q6IE36 1432 aa10.83□□□□□ -0.68
CLK1-201ENST00000321356 NCKAP5LQ9HCH0 1330 aa10.83□□□□□ -0.68
CLK1-201ENST00000321356 PEAK1Q9H792 1746 aa10.83□□□□□ -0.68
CLK1-201ENST00000321356 HAP1P54257 671 aaPredicted RBP10.83□□□□□ -0.68
CLK1-201ENST00000321356 GBP4Q96PP9 640 aa10.83□□□□□ -0.68
CLK1-201ENST00000321356 PANK2Q9BZ23 570 aa10.83□□□□□ -0.68
CLK1-201ENST00000321356 CHL1O00533 1208 aa10.82□□□□□ -0.68
CLK1-201ENST00000321356 PTMSP20962 102 aa10.82□□□□□ -0.68
CLK1-201ENST00000321356 FAM69CQ0P6D2 419 aa10.82□□□□□ -0.68
CLK1-201ENST00000321356 DCTN1Q14203 1278 aa10.82□□□□□ -0.68
CLK1-201ENST00000321356 EIF4A2Q14240 407 aaKnown RBP10.82□□□□□ -0.68
CLK1-201ENST00000321356 CLEC17AQ6ZS10 378 aa10.82□□□□□ -0.68
CLK1-201ENST00000321356 ANKRD44Q8N8A2 993 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms