RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 PTPRTO14522 1441 aa15.46■□□□□ 0.06
DNMT3A-202ENST00000321117 SYCE3A1L190 88 aa15.46■□□□□ 0.06
DNMT3A-202ENST00000321117 GNAI3P08754 354 aa15.46■□□□□ 0.06
DNMT3A-202ENST00000321117 DCTN1Q14203 1278 aa15.45■□□□□ 0.06
DNMT3A-202ENST00000321117 GAS2L2Q8NHY3 880 aa15.45■□□□□ 0.06
DNMT3A-202ENST00000321117 RTEL1-TNFRSF6BF6WH68 1400 aa15.45■□□□□ 0.06
DNMT3A-202ENST00000321117 SMARCA5O60264 1052 aaPredicted RBP15.45■□□□□ 0.06
DNMT3A-202ENST00000321117 GNAI2P04899 355 aa15.45■□□□□ 0.06
DNMT3A-202ENST00000321117 RRS1Q15050 365 aaKnown RBP15.45■□□□□ 0.06
DNMT3A-202ENST00000321117 HTATSF1O43719 755 aaKnown RBP15.45■□□□□ 0.06
DNMT3A-202ENST00000321117 PUS7Q96PZ0 661 aaKnown RBP15.45■□□□□ 0.06
DNMT3A-202ENST00000321117 NRDCO43847 1150 aa15.44■□□□□ 0.06
DNMT3A-202ENST00000321117 RAPGEF3O95398 923 aa15.44■□□□□ 0.06
DNMT3A-202ENST00000321117 IDI1Q13907 227 aa15.44■□□□□ 0.06
DNMT3A-202ENST00000321117 EMILIN1Q9Y6C2 1016 aa15.44■□□□□ 0.06
DNMT3A-202ENST00000321117 HDAC5Q9UQL6 1122 aa15.44■□□□□ 0.06
DNMT3A-202ENST00000321117 RUFY2Q8WXA3 655 aa15.43■□□□□ 0.06
DNMT3A-202ENST00000321117 MBIPQ9NS73 344 aa15.43■□□□□ 0.06
DNMT3A-202ENST00000321117 UQCRHLA0A096LP55 91 aa15.43■□□□□ 0.06
DNMT3A-202ENST00000321117 UQCRHP07919 91 aa15.43■□□□□ 0.06
DNMT3A-202ENST00000321117 VPS37CA5D8V6 355 aaPredicted RBP15.43■□□□□ 0.06
DNMT3A-202ENST00000321117 CCT4P50991 539 aaKnown RBP15.43■□□□□ 0.06
DNMT3A-202ENST00000321117 TTC22Q5TAA0 569 aa15.43■□□□□ 0.06
DNMT3A-202ENST00000321117 LMOD2Q6P5Q4 547 aa15.43■□□□□ 0.06
DNMT3A-202ENST00000321117 LRRCC1Q9C099 1032 aa15.42■□□□□ 0.06
DNMT3A-202ENST00000321117 ATP10AO60312 1499 aa15.42■□□□□ 0.06
DNMT3A-202ENST00000321117 ERVK-7P63135 1459 aa15.42■□□□□ 0.06
DNMT3A-202ENST00000321117 TRIM35Q9UPQ4 493 aa15.42■□□□□ 0.06
DNMT3A-202ENST00000321117 UBTFL1P0CB47 393 aaPredicted RBP15.42■□□□□ 0.06
DNMT3A-202ENST00000321117 FBLN1P23142 703 aa15.42■□□□□ 0.06
DNMT3A-202ENST00000321117 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
DNMT3A-202ENST00000321117 CHMP3Q9Y3E7 222 aa15.42■□□□□ 0.06
DNMT3A-202ENST00000321117 MRPL50Q8N5N7 158 aaKnown RBP15.41■□□□□ 0.06
DNMT3A-202ENST00000321117 ZKSCAN1P17029 563 aaPredicted RBP15.41■□□□□ 0.06
DNMT3A-202ENST00000321117 MPNDQ8N594 471 aa15.41■□□□□ 0.06
DNMT3A-202ENST00000321117 WDR33Q9C0J8 1336 aaKnown RBP15.41■□□□□ 0.06
DNMT3A-202ENST00000321117 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
DNMT3A-202ENST00000321117 XPCQ01831 940 aaPredicted RBP15.41■□□□□ 0.06
DNMT3A-202ENST00000321117 EXOC6BQ9Y2D4 811 aa15.4■□□□□ 0.06
DNMT3A-202ENST00000321117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.4■□□□□ 0.06
DNMT3A-202ENST00000321117 ZSCAN23Q3MJ62 389 aa15.4■□□□□ 0.06
DNMT3A-202ENST00000321117 SBNO2Q9Y2G9 1366 aa15.4■□□□□ 0.06
DNMT3A-202ENST00000321117 FSD2A1L4K1 749 aa15.4■□□□□ 0.06
DNMT3A-202ENST00000321117 VAMP4O75379 141 aa15.4■□□□□ 0.06
DNMT3A-202ENST00000321117 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.4■□□□□ 0.06
DNMT3A-202ENST00000321117 SURF6O75683 361 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-202ENST00000321117 WAPLQ7Z5K2 1190 aa15.4■□□□□ 0.06
DNMT3A-202ENST00000321117 PDCL3Q9H2J4 239 aa15.4■□□□□ 0.06
DNMT3A-202ENST00000321117 TXNDC2Q86VQ3 553 aa15.39■□□□□ 0.05
DNMT3A-202ENST00000321117 NME9Q86XW9 330 aa15.39■□□□□ 0.05
DNMT3A-202ENST00000321117 PREX2Q70Z35 1606 aa15.39■□□□□ 0.05
DNMT3A-202ENST00000321117 FIBPO43427 364 aa15.39■□□□□ 0.05
DNMT3A-202ENST00000321117 A0A1W2PP64 1363 aa15.39■□□□□ 0.05
DNMT3A-202ENST00000321117 ZBTB7BO15156 539 aaPredicted RBP15.39■□□□□ 0.05
DNMT3A-202ENST00000321117 CCDC30Q5VVM6 783 aa15.39■□□□□ 0.05
DNMT3A-202ENST00000321117 TSPYL6Q8N831 410 aa15.39■□□□□ 0.05
DNMT3A-202ENST00000321117 RBM27Q9P2N5 1060 aaKnown RBP15.39■□□□□ 0.05
DNMT3A-202ENST00000321117 LETM1O95202 739 aaPredicted RBP15.38■□□□□ 0.05
DNMT3A-202ENST00000321117 HMGN5P82970 282 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-202ENST00000321117 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-202ENST00000321117 MCM10Q7L590 875 aa15.38■□□□□ 0.05
DNMT3A-202ENST00000321117 UPF3BQ9BZI7 483 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-202ENST00000321117 TTC37Q6PGP7 1564 aa15.38■□□□□ 0.05
DNMT3A-202ENST00000321117 FAM83GA6ND36 823 aa15.37■□□□□ 0.05
DNMT3A-202ENST00000321117 SDSP20132 328 aa15.37■□□□□ 0.05
DNMT3A-202ENST00000321117 TAOK2Q9UL54 1235 aa15.37■□□□□ 0.05
DNMT3A-202ENST00000321117 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
DNMT3A-202ENST00000321117 HSP90AB4PQ58FF6 505 aa15.37■□□□□ 0.05
DNMT3A-202ENST00000321117 C8orf58Q8NAV2 365 aa15.37■□□□□ 0.05
DNMT3A-202ENST00000321117 CNTROBQ8N137 903 aa15.36■□□□□ 0.05
DNMT3A-202ENST00000321117 IFIT2P09913 472 aaKnown RBP15.36■□□□□ 0.05
DNMT3A-202ENST00000321117 C16orf71Q8IYS4 520 aaPredicted RBP15.36■□□□□ 0.05
DNMT3A-202ENST00000321117 CCDC61Q9Y6R9 512 aa15.36■□□□□ 0.05
DNMT3A-202ENST00000321117 TRPM2O94759 1503 aa15.36■□□□□ 0.05
DNMT3A-202ENST00000321117 SRCIN1Q9C0H9 1055 aa15.36■□□□□ 0.05
DNMT3A-202ENST00000321117 C9orf78Q9NZ63 289 aaPredicted RBP15.36■□□□□ 0.05
DNMT3A-202ENST00000321117 IQGAP3Q86VI3 1631 aa15.36■□□□□ 0.05
DNMT3A-202ENST00000321117 ANKRD44Q8N8A2 993 aa15.35■□□□□ 0.05
DNMT3A-202ENST00000321117 FAM184AQ8NB25 1140 aa15.35■□□□□ 0.05
DNMT3A-202ENST00000321117 PLEKHM2Q8IWE5 1019 aa15.35■□□□□ 0.05
DNMT3A-202ENST00000321117 DCTPP1Q9H773 170 aa15.35■□□□□ 0.05
DNMT3A-202ENST00000321117 PHACTR3Q96KR7 559 aa15.35■□□□□ 0.05
DNMT3A-202ENST00000321117 POLKQ9UBT6 870 aa15.35■□□□□ 0.05
DNMT3A-202ENST00000321117 MYO5CQ9NQX4 1742 aa15.35■□□□□ 0.05
DNMT3A-202ENST00000321117 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
DNMT3A-202ENST00000321117 GOLGA6L19H0YKK7 550 aa15.34■□□□□ 0.05
DNMT3A-202ENST00000321117 MX1P20591 662 aa15.34■□□□□ 0.05
DNMT3A-202ENST00000321117 NUDT16Q96DE0 195 aaKnown RBP15.34■□□□□ 0.05
DNMT3A-202ENST00000321117 MIS18AQ9NYP9 233 aa15.34■□□□□ 0.05
DNMT3A-202ENST00000321117 TEFQ10587 303 aa15.34■□□□□ 0.05
DNMT3A-202ENST00000321117 IL1RAPL2Q9NP60 686 aa15.34■□□□□ 0.05
DNMT3A-202ENST00000321117 CD109Q6YHK3 1445 aa15.34■□□□□ 0.05
DNMT3A-202ENST00000321117 F6X3S4 739 aa15.34■□□□□ 0.05
DNMT3A-202ENST00000321117 H3BQV1 296 aa15.34■□□□□ 0.05
DNMT3A-202ENST00000321117 IFFO2Q5TF58 517 aa15.34■□□□□ 0.05
DNMT3A-202ENST00000321117 UNC13BO14795 1591 aa15.33■□□□□ 0.05
DNMT3A-202ENST00000321117 PRIM1P49642 420 aaKnown RBP15.33■□□□□ 0.04
DNMT3A-202ENST00000321117 LRSAM1Q6UWE0 723 aa15.33■□□□□ 0.04
DNMT3A-202ENST00000321117 BICD2Q8TD16 824 aa15.33■□□□□ 0.04
DNMT3A-202ENST00000321117 EID1Q9Y6B2 187 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms