RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 IL13P35225 146 aa12.86□□□□□ -0.35
LCLAT1-202ENST00000319406 ZKSCAN2Q63HK3 967 aa12.86□□□□□ -0.35
LCLAT1-202ENST00000319406 PMFBP1Q8TBY8 1022 aa12.86□□□□□ -0.35
LCLAT1-202ENST00000319406 NUDT16Q96DE0 195 aaKnown RBP12.86□□□□□ -0.35
LCLAT1-202ENST00000319406 ITSN1Q15811 1721 aa12.85□□□□□ -0.35
LCLAT1-202ENST00000319406 NME9Q86XW9 330 aa12.85□□□□□ -0.35
LCLAT1-202ENST00000319406 SSH1Q8WYL5 1049 aa12.85□□□□□ -0.35
LCLAT1-202ENST00000319406 NCKAP5LQ9HCH0 1330 aa12.85□□□□□ -0.35
LCLAT1-202ENST00000319406 BECN1Q14457 450 aa12.85□□□□□ -0.35
LCLAT1-202ENST00000319406 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
LCLAT1-202ENST00000319406 ERBB4Q15303 1308 aa12.84□□□□□ -0.35
LCLAT1-202ENST00000319406 TRIM27P14373 513 aa12.84□□□□□ -0.35
LCLAT1-202ENST00000319406 EMILIN1Q9Y6C2 1016 aa12.84□□□□□ -0.35
LCLAT1-202ENST00000319406 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
LCLAT1-202ENST00000319406 PRKAR2BP31323 418 aa12.84□□□□□ -0.35
LCLAT1-202ENST00000319406 DZIP1LQ8IYY4 767 aaKnown RBP12.84□□□□□ -0.35
LCLAT1-202ENST00000319406 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
LCLAT1-202ENST00000319406 HDGFP51858 240 aaKnown RBP12.83□□□□□ -0.36
LCLAT1-202ENST00000319406 PHACTR3Q96KR7 559 aa12.83□□□□□ -0.36
LCLAT1-202ENST00000319406 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
LCLAT1-202ENST00000319406 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.36
LCLAT1-202ENST00000319406 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
LCLAT1-202ENST00000319406 BRPF1P55201 1214 aaPredicted RBP12.82□□□□□ -0.36
LCLAT1-202ENST00000319406 LTKP29376 864 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 MCM4P33991 863 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 ATF7IPQ6VMQ6 1270 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 PTPRUQ92729 1446 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 NALCNQ8IZF0 1738 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 ARHGAP23Q9P227 1491 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 SLIT1O75093 1534 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 OVOS2A0A0J9YW53 1432 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 OVOS2Q6IE36 1432 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 SPRYD3Q8NCJ5 442 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 DLG5Q8TDM6 1919 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 ALDH1L2Q3SY69 923 aa12.81□□□□□ -0.36
LCLAT1-202ENST00000319406 ZNF853P0CG23 659 aa12.8□□□□□ -0.36
LCLAT1-202ENST00000319406 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
LCLAT1-202ENST00000319406 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
LCLAT1-202ENST00000319406 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
LCLAT1-202ENST00000319406 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
LCLAT1-202ENST00000319406 ESPNB1AK53 854 aa12.79□□□□□ -0.36
LCLAT1-202ENST00000319406 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
LCLAT1-202ENST00000319406 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
LCLAT1-202ENST00000319406 RWDD1Q9H446 243 aaPredicted RBP12.79□□□□□ -0.36
LCLAT1-202ENST00000319406 HMOX1P09601 288 aa12.79□□□□□ -0.36
LCLAT1-202ENST00000319406 ZNF428Q96B54 188 aa12.79□□□□□ -0.36
LCLAT1-202ENST00000319406 COG3Q96JB2 828 aa12.79□□□□□ -0.36
LCLAT1-202ENST00000319406 KIF16BQ96L93 1317 aa12.79□□□□□ -0.36
LCLAT1-202ENST00000319406 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
LCLAT1-202ENST00000319406 TRAK2O60296 914 aa12.78□□□□□ -0.36
LCLAT1-202ENST00000319406 DDX19BQ9UMR2 479 aa12.78□□□□□ -0.36
LCLAT1-202ENST00000319406 RGPD1P0DJD0 1748 aa12.78□□□□□ -0.36
LCLAT1-202ENST00000319406 MRE11P49959 708 aa12.78□□□□□ -0.36
LCLAT1-202ENST00000319406 TBC1D32Q96NH3 1257 aa12.78□□□□□ -0.36
LCLAT1-202ENST00000319406 PIK3R4Q99570 1358 aa12.78□□□□□ -0.36
LCLAT1-202ENST00000319406 PLEKHG5O94827 1062 aa12.77□□□□□ -0.36
LCLAT1-202ENST00000319406 RRS1Q15050 365 aaKnown RBP12.77□□□□□ -0.36
LCLAT1-202ENST00000319406 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.36
LCLAT1-202ENST00000319406 USP6P35125 1406 aa12.77□□□□□ -0.36
LCLAT1-202ENST00000319406 PTCH1Q13635 1447 aa12.77□□□□□ -0.36
LCLAT1-202ENST00000319406 PEAK1Q9H792 1746 aa12.77□□□□□ -0.36
LCLAT1-202ENST00000319406 TMEM57Q8N5G2 664 aa12.77□□□□□ -0.37
LCLAT1-202ENST00000319406 IFT57Q9NWB7 429 aa12.77□□□□□ -0.37
LCLAT1-202ENST00000319406 USP31Q70CQ4 1352 aa12.76□□□□□ -0.37
LCLAT1-202ENST00000319406 TTC21BQ7Z4L5 1316 aa12.76□□□□□ -0.37
LCLAT1-202ENST00000319406 VAMP4O75379 141 aa12.76□□□□□ -0.37
LCLAT1-202ENST00000319406 GRPEL1Q9HAV7 217 aa12.76□□□□□ -0.37
LCLAT1-202ENST00000319406 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
LCLAT1-202ENST00000319406 PODXL2Q9NZ53 605 aa12.76□□□□□ -0.37
LCLAT1-202ENST00000319406 SMC5Q8IY18 1101 aa12.75□□□□□ -0.37
LCLAT1-202ENST00000319406 ACEP12821 1306 aa12.75□□□□□ -0.37
LCLAT1-202ENST00000319406 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
LCLAT1-202ENST00000319406 CALD1Q05682 793 aaKnown RBP12.74□□□□□ -0.37
LCLAT1-202ENST00000319406 MRPL50Q8N5N7 158 aaKnown RBP12.74□□□□□ -0.37
LCLAT1-202ENST00000319406 TSPYL6Q8N831 410 aa12.74□□□□□ -0.37
LCLAT1-202ENST00000319406 PDCL3Q9H2J4 239 aa12.74□□□□□ -0.37
LCLAT1-202ENST00000319406 MBIPQ9NS73 344 aa12.74□□□□□ -0.37
LCLAT1-202ENST00000319406 DIP2AQ14689 1571 aa12.74□□□□□ -0.37
LCLAT1-202ENST00000319406 IPO8O15397 1037 aaKnown RBP12.74□□□□□ -0.37
LCLAT1-202ENST00000319406 CEBPAP49715 358 aaPredicted RBP12.74□□□□□ -0.37
LCLAT1-202ENST00000319406 GNAI1P63096 354 aa12.74□□□□□ -0.37
LCLAT1-202ENST00000319406 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
LCLAT1-202ENST00000319406 ARHGAP45Q92619 1136 aa12.73□□□□□ -0.37
LCLAT1-202ENST00000319406 EIF4A2Q14240 407 aaKnown RBP12.73□□□□□ -0.37
LCLAT1-202ENST00000319406 CFAP44Q96MT7 982 aa12.73□□□□□ -0.37
LCLAT1-202ENST00000319406 RIMS1Q86UR5 1692 aaKnown RBP12.72□□□□□ -0.37
LCLAT1-202ENST00000319406 FER1L4A9Z1Z3 1794 aa12.72□□□□□ -0.37
LCLAT1-202ENST00000319406 GAS2L3Q86XJ1 694 aa12.72□□□□□ -0.37
LCLAT1-202ENST00000319406 PRDM4Q9UKN5 801 aa12.72□□□□□ -0.37
LCLAT1-202ENST00000319406 LMOD3Q0VAK6 560 aa12.71□□□□□ -0.37
LCLAT1-202ENST00000319406 TBX22Q9Y458 520 aa12.71□□□□□ -0.37
LCLAT1-202ENST00000319406 ABCC4O15439 1325 aa12.71□□□□□ -0.37
LCLAT1-202ENST00000319406 TPM2P07951 284 aa12.71□□□□□ -0.38
LCLAT1-202ENST00000319406 AEBP1Q8IUX7 1158 aa12.7□□□□□ -0.38
LCLAT1-202ENST00000319406 SLC26A8Q96RN1 970 aa12.7□□□□□ -0.38
LCLAT1-202ENST00000319406 CHMP5Q9NZZ3 219 aa12.7□□□□□ -0.38
LCLAT1-202ENST00000319406 FAM83GA6ND36 823 aa12.7□□□□□ -0.38
LCLAT1-202ENST00000319406 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
LCLAT1-202ENST00000319406 UPF2Q9HAU5 1272 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 391.1 ms