RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 EIF4A2Q14240 407 aaKnown RBP23.52■■□□□ 1.36
SHISA3-201ENST00000319234 RBM33Q96EV2 1170 aaKnown RBP23.52■■□□□ 1.36
SHISA3-201ENST00000319234 NWD1Q149M9 1564 aa23.51■■□□□ 1.35
SHISA3-201ENST00000319234 PIK3C2AO00443 1686 aa23.5■■□□□ 1.35
SHISA3-201ENST00000319234 PEAK1Q9H792 1746 aa23.49■■□□□ 1.35
SHISA3-201ENST00000319234 NLRP6P59044 892 aa23.49■■□□□ 1.35
SHISA3-201ENST00000319234 PDE3AQ14432 1141 aa23.49■■□□□ 1.35
SHISA3-201ENST00000319234 MAP3K19Q56UN5 1328 aa23.48■■□□□ 1.35
SHISA3-201ENST00000319234 HSP90AB2PQ58FF8 381 aa23.48■■□□□ 1.35
SHISA3-201ENST00000319234 TSR2Q969E8 191 aaKnown RBP23.48■■□□□ 1.35
SHISA3-201ENST00000319234 SOX12O15370 315 aa23.47■■□□□ 1.35
SHISA3-201ENST00000319234 SBNO1A3KN83 1393 aa23.47■■□□□ 1.35
SHISA3-201ENST00000319234 C14orf37Q86TY3 774 aa23.47■■□□□ 1.35
SHISA3-201ENST00000319234 NPM2Q86SE8 214 aaKnown RBP23.46■■□□□ 1.35
SHISA3-201ENST00000319234 CANXP27824 592 aaKnown RBP23.45■■□□□ 1.35
SHISA3-201ENST00000319234 CALD1Q05682 793 aaKnown RBP23.45■■□□□ 1.35
SHISA3-201ENST00000319234 EXOSC9Q06265 439 aaKnown RBP23.45■■□□□ 1.35
SHISA3-201ENST00000319234 USP54Q70EL1 1684 aa23.45■■□□□ 1.34
SHISA3-201ENST00000319234 FLT4P35916 1363 aa23.45■■□□□ 1.34
SHISA3-201ENST00000319234 DDRGK1Q96HY6 314 aa23.45■■□□□ 1.34
SHISA3-201ENST00000319234 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
SHISA3-201ENST00000319234 SULT6B1Q6IMI4 303 aa23.44■■□□□ 1.34
SHISA3-201ENST00000319234 ABTB2Q8N961 1025 aa23.44■■□□□ 1.34
SHISA3-201ENST00000319234 ESCO1Q5FWF5 840 aa23.43■■□□□ 1.34
SHISA3-201ENST00000319234 PROSER2Q86WR7 435 aaPredicted RBP23.43■■□□□ 1.34
SHISA3-201ENST00000319234 AMPHP49418 695 aa23.42■■□□□ 1.34
SHISA3-201ENST00000319234 AEBP1Q8IUX7 1158 aa23.41■■□□□ 1.34
SHISA3-201ENST00000319234 FRAT1Q92837 279 aaPredicted RBP23.41■■□□□ 1.34
SHISA3-201ENST00000319234 KIF24Q5T7B8 1368 aa23.41■■□□□ 1.34
SHISA3-201ENST00000319234 RGPD1P0DJD0 1748 aa23.41■■□□□ 1.34
SHISA3-201ENST00000319234 NBR1Q14596 966 aa23.41■■□□□ 1.34
SHISA3-201ENST00000319234 ARHGEF10O15013 1369 aa23.41■■□□□ 1.34
SHISA3-201ENST00000319234 NUTM2GQ5VZR2 741 aa23.4■■□□□ 1.34
SHISA3-201ENST00000319234 MARF1Q9Y4F3 1742 aaKnown RBP23.4■■□□□ 1.34
SHISA3-201ENST00000319234 PSME1Q06323 249 aa23.4■■□□□ 1.34
SHISA3-201ENST00000319234 RTL5Q5HYW3 569 aaPredicted RBP23.39■■□□□ 1.33
SHISA3-201ENST00000319234 DEKP35659 375 aaKnown RBP23.38■■□□□ 1.33
SHISA3-201ENST00000319234 BCL2L13Q9BXK5 485 aa23.38■■□□□ 1.33
SHISA3-201ENST00000319234 BCL11AQ9H165 835 aa23.38■■□□□ 1.33
SHISA3-201ENST00000319234 IFT57Q9NWB7 429 aa23.38■■□□□ 1.33
SHISA3-201ENST00000319234 GNAI1P63096 354 aa23.38■■□□□ 1.33
SHISA3-201ENST00000319234 FAM161AQ3B820 660 aa23.38■■□□□ 1.33
SHISA3-201ENST00000319234 PANK1Q8TE04 598 aa23.38■■□□□ 1.33
SHISA3-201ENST00000319234 ZNF853P0CG23 659 aa23.36■■□□□ 1.33
SHISA3-201ENST00000319234 THUMPD2Q9BTF0 503 aaKnown RBP23.36■■□□□ 1.33
SHISA3-201ENST00000319234 AAMPQ13685 434 aa23.36■■□□□ 1.33
SHISA3-201ENST00000319234 C19orf44Q9H6X5 657 aa23.36■■□□□ 1.33
SHISA3-201ENST00000319234 LAS1LQ9Y4W2 734 aaKnown RBP23.36■■□□□ 1.33
SHISA3-201ENST00000319234 ORAI2Q96SN7 254 aa23.35■■□□□ 1.33
SHISA3-201ENST00000319234 HOXC9P31274 260 aa23.34■■□□□ 1.33
SHISA3-201ENST00000319234 SKAP1Q86WV1 359 aa23.34■■□□□ 1.33
SHISA3-201ENST00000319234 SMC4Q9NTJ3 1288 aa23.34■■□□□ 1.33
SHISA3-201ENST00000319234 COG6Q9Y2V7 657 aa23.34■■□□□ 1.33
SHISA3-201ENST00000319234 DLG5Q8TDM6 1919 aa23.34■■□□□ 1.33
SHISA3-201ENST00000319234 ZKSCAN2Q63HK3 967 aa23.34■■□□□ 1.33
SHISA3-201ENST00000319234 SSH1Q8WYL5 1049 aa23.34■■□□□ 1.33
SHISA3-201ENST00000319234 USP35Q9P2H5 1018 aa23.33■■□□□ 1.33
SHISA3-201ENST00000319234 KDRP35968 1356 aa23.33■■□□□ 1.33
SHISA3-201ENST00000319234 IGSF1Q8N6C5 1336 aa23.33■■□□□ 1.32
SHISA3-201ENST00000319234 ZNF428Q96B54 188 aa23.32■■□□□ 1.32
SHISA3-201ENST00000319234 CFAP44Q96MT7 982 aa23.32■■□□□ 1.32
SHISA3-201ENST00000319234 EYA1Q99502 592 aa23.32■■□□□ 1.32
SHISA3-201ENST00000319234 ALDH1L2Q3SY69 923 aa23.32■■□□□ 1.32
SHISA3-201ENST00000319234 VIRMAQ69YN4 1812 aaKnown RBP23.32■■□□□ 1.32
SHISA3-201ENST00000319234 C8orf34Q49A92 452 aa23.31■■□□□ 1.32
SHISA3-201ENST00000319234 RTL1A6NKG5 1358 aa23.31■■□□□ 1.32
SHISA3-201ENST00000319234 FAM83GA6ND36 823 aa23.31■■□□□ 1.32
SHISA3-201ENST00000319234 RLBP1P12271 317 aa23.31■■□□□ 1.32
SHISA3-201ENST00000319234 C1orf167Q5SNV9 1468 aa23.3■■□□□ 1.32
SHISA3-201ENST00000319234 NCOA3Q9Y6Q9 1424 aa23.3■■□□□ 1.32
SHISA3-201ENST00000319234 CLUAP1Q96AJ1 413 aa23.3■■□□□ 1.32
SHISA3-201ENST00000319234 MBIPQ9NS73 344 aa23.3■■□□□ 1.32
SHISA3-201ENST00000319234 TNNQ9UQP3 1299 aa23.3■■□□□ 1.32
SHISA3-201ENST00000319234 FOXO3O43524 673 aa23.29■■□□□ 1.32
SHISA3-201ENST00000319234 KCNH5Q8NCM2 988 aa23.29■■□□□ 1.32
SHISA3-201ENST00000319234 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
SHISA3-201ENST00000319234 HSPA2P54652 639 aa23.28■■□□□ 1.32
SHISA3-201ENST00000319234 DCTN1Q14203 1278 aa23.28■■□□□ 1.32
SHISA3-201ENST00000319234 TMEM94Q12767 1356 aa23.27■■□□□ 1.32
SHISA3-201ENST00000319234 NFAT5O94916 1531 aa23.27■■□□□ 1.32
SHISA3-201ENST00000319234 DZIP1LQ8IYY4 767 aaKnown RBP23.27■■□□□ 1.32
SHISA3-201ENST00000319234 VAMP4O75379 141 aa23.27■■□□□ 1.32
SHISA3-201ENST00000319234 IP6K1Q92551 441 aa23.27■■□□□ 1.32
SHISA3-201ENST00000319234 BRPF1P55201 1214 aaPredicted RBP23.26■■□□□ 1.31
SHISA3-201ENST00000319234 KIF1AQ12756 1690 aa23.26■■□□□ 1.31
SHISA3-201ENST00000319234 KIF16BQ96L93 1317 aa23.26■■□□□ 1.31
SHISA3-201ENST00000319234 ATF3P18847 181 aa23.25■■□□□ 1.31
SHISA3-201ENST00000319234 FTSJ3Q8IY81 847 aaKnown RBP23.25■■□□□ 1.31
SHISA3-201ENST00000319234 NOB1Q9ULX3 412 aaKnown RBP23.25■■□□□ 1.31
SHISA3-201ENST00000319234 IPO8O15397 1037 aaKnown RBP23.25■■□□□ 1.31
SHISA3-201ENST00000319234 MVPQ14764 893 aaKnown RBP23.25■■□□□ 1.31
SHISA3-201ENST00000319234 MTHFSDQ2M296 383 aaKnown RBP23.25■■□□□ 1.31
SHISA3-201ENST00000319234 ATF7IPQ6VMQ6 1270 aa23.25■■□□□ 1.31
SHISA3-201ENST00000319234 KRT28Q7Z3Y7 464 aa23.25■■□□□ 1.31
SHISA3-201ENST00000319234 DCCP43146 1447 aa23.24■■□□□ 1.31
SHISA3-201ENST00000319234 STRCP1A6NGW2 1772 aa23.24■■□□□ 1.31
SHISA3-201ENST00000319234 KDM4FA0A1W2PPD8 638 aa23.23■■□□□ 1.31
SHISA3-201ENST00000319234 TRIM27P14373 513 aa23.23■■□□□ 1.31
SHISA3-201ENST00000319234 XPCQ01831 940 aaPredicted RBP23.23■■□□□ 1.31
SHISA3-201ENST00000319234 GAS2L2Q8NHY3 880 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms