RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CGNQ9P2M7 1197 aaKnown RBP9.16□□□□□ -0.94
CDHR3-201ENST00000317716 USP25Q9UHP3 1055 aa9.16□□□□□ -0.94
CDHR3-201ENST00000317716 ERBB4Q15303 1308 aa9.16□□□□□ -0.94
CDHR3-201ENST00000317716 SMARCA5O60264 1052 aaPredicted RBP9.16□□□□□ -0.94
CDHR3-201ENST00000317716 C17orf53Q8N3J3 647 aaPredicted RBP9.16□□□□□ -0.94
CDHR3-201ENST00000317716 GAS2L2Q8NHY3 880 aa9.16□□□□□ -0.94
CDHR3-201ENST00000317716 UPF3BQ9BZI7 483 aaKnown RBP9.16□□□□□ -0.94
CDHR3-201ENST00000317716 TSPY26PQ9H489 355 aa9.16□□□□□ -0.94
CDHR3-201ENST00000317716 PHF14O94880 888 aa9.16□□□□□ -0.94
CDHR3-201ENST00000317716 ESCO1Q5FWF5 840 aa9.16□□□□□ -0.94
CDHR3-201ENST00000317716 TRIM27P14373 513 aa9.15□□□□□ -0.94
CDHR3-201ENST00000317716 PRIM1P49642 420 aaKnown RBP9.15□□□□□ -0.94
CDHR3-201ENST00000317716 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
CDHR3-201ENST00000317716 ADGBQ8N7X0 1667 aa9.15□□□□□ -0.94
CDHR3-201ENST00000317716 NKTRP30414 1462 aaKnown RBP9.15□□□□□ -0.94
CDHR3-201ENST00000317716 KCNA6P17658 529 aa9.15□□□□□ -0.94
CDHR3-201ENST00000317716 KIF16BQ96L93 1317 aa9.15□□□□□ -0.95
CDHR3-201ENST00000317716 PER1O15534 1290 aaPredicted RBP9.15□□□□□ -0.95
CDHR3-201ENST00000317716 FBLN1P23142 703 aa9.14□□□□□ -0.95
CDHR3-201ENST00000317716 PPP4R3BQ5MIZ7 849 aa9.14□□□□□ -0.95
CDHR3-201ENST00000317716 INTS3Q68E01 1043 aaKnown RBP9.14□□□□□ -0.95
CDHR3-201ENST00000317716 ZBTB9Q96C00 473 aa9.14□□□□□ -0.95
CDHR3-201ENST00000317716 GOLGA6L6A8MZA4 724 aa9.14□□□□□ -0.95
CDHR3-201ENST00000317716 CCAR2Q8N163 923 aaKnown RBP9.14□□□□□ -0.95
CDHR3-201ENST00000317716 DDX54Q8TDD1 881 aaKnown RBP9.14□□□□□ -0.95
CDHR3-201ENST00000317716 TTC12Q9H892 705 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-201ENST00000317716 MAGI2Q86UL8 1455 aa9.14□□□□□ -0.95
CDHR3-201ENST00000317716 CEP152O94986 1710 aa9.14□□□□□ -0.95
CDHR3-201ENST00000317716 REC8O95072 547 aa9.14□□□□□ -0.95
CDHR3-201ENST00000317716 ATF3P18847 181 aa9.14□□□□□ -0.95
CDHR3-201ENST00000317716 ZSCAN23Q3MJ62 389 aa9.14□□□□□ -0.95
CDHR3-201ENST00000317716 HDGFL2Q7Z4V5 671 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-201ENST00000317716 RIMS2Q9UQ26 1411 aa9.14□□□□□ -0.95
CDHR3-201ENST00000317716 MAP4K4O95819 1239 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-201ENST00000317716 TSHZ3Q63HK5 1081 aa9.13□□□□□ -0.95
CDHR3-201ENST00000317716 TBC1D9Q6ZT07 1266 aa9.13□□□□□ -0.95
CDHR3-201ENST00000317716 ISY1Q9ULR0 285 aaKnown RBP9.13□□□□□ -0.95
CDHR3-201ENST00000317716 PRDM15P57071 1507 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-201ENST00000317716 UHRF1BP1Q6BDS2 1440 aa9.13□□□□□ -0.95
CDHR3-201ENST00000317716 DDX17Q92841 729 aaKnown RBP9.13□□□□□ -0.95
CDHR3-201ENST00000317716 PDCL2Q8N4E4 241 aa9.13□□□□□ -0.95
CDHR3-201ENST00000317716 BBXQ8WY36 941 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-201ENST00000317716 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-201ENST00000317716 PARD3Q8TEW0 1356 aa9.12□□□□□ -0.95
CDHR3-201ENST00000317716 RABEP1Q15276 862 aa9.12□□□□□ -0.95
CDHR3-201ENST00000317716 SASS6Q6UVJ0 657 aa9.12□□□□□ -0.95
CDHR3-201ENST00000317716 CLTCQ00610 1675 aaKnown RBP9.12□□□□□ -0.95
CDHR3-201ENST00000317716 FOXO3O43524 673 aa9.12□□□□□ -0.95
CDHR3-201ENST00000317716 HSP90B1P14625 803 aaKnown RBP9.12□□□□□ -0.95
CDHR3-201ENST00000317716 GORABQ5T7V8 394 aa9.12□□□□□ -0.95
CDHR3-201ENST00000317716 ZGPATQ8N5A5 531 aaKnown RBP9.12□□□□□ -0.95
CDHR3-201ENST00000317716 KIF3AQ9Y496 699 aa9.12□□□□□ -0.95
CDHR3-201ENST00000317716 MAST1Q9Y2H9 1570 aa9.12□□□□□ -0.95
CDHR3-201ENST00000317716 DIAPH1O60610 1272 aaKnown RBP9.12□□□□□ -0.95
CDHR3-201ENST00000317716 OFD1O75665 1012 aa9.12□□□□□ -0.95
CDHR3-201ENST00000317716 MTERF4Q7Z6M4 381 aaKnown RBP9.12□□□□□ -0.95
CDHR3-201ENST00000317716 RBSNQ9H1K0 784 aa9.12□□□□□ -0.95
CDHR3-201ENST00000317716 RICTORQ6R327 1708 aa9.11□□□□□ -0.95
CDHR3-201ENST00000317716 PRKAR2BP31323 418 aa9.11□□□□□ -0.95
CDHR3-201ENST00000317716 ABCC3O15438 1527 aa9.11□□□□□ -0.95
CDHR3-201ENST00000317716 ZNF335Q9H4Z2 1342 aaPredicted RBP9.11□□□□□ -0.95
CDHR3-201ENST00000317716 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
CDHR3-201ENST00000317716 CDK19Q9BWU1 502 aa9.11□□□□□ -0.95
CDHR3-201ENST00000317716 CABP1Q9NZU7 370 aa9.11□□□□□ -0.95
CDHR3-201ENST00000317716 PPRC1Q5VV67 1664 aaKnown RBP9.11□□□□□ -0.95
CDHR3-201ENST00000317716 PLA2R1Q13018 1463 aa9.11□□□□□ -0.95
CDHR3-201ENST00000317716 HMMRO75330 724 aa9.11□□□□□ -0.95
CDHR3-201ENST00000317716 NUTM2BA6NNL0 878 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 VGLL3A8MV65 326 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 NUTM2EB1AL46 878 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 PSME1Q06323 249 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 KLHL40Q2TBA0 621 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 NUTM2AQ8IVF1 878 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 BICD2Q8TD16 824 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 TRIM5Q9C035 493 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 INO80Q9ULG1 1556 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 GNL2Q13823 731 aaKnown RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 TPD52L1Q16890 204 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 SKIDA1Q1XH10 827 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 JARID2Q92833 1246 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 RIMS1Q86UR5 1692 aaKnown RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 GCC2Q8IWJ2 1684 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 MBD3O95983 291 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 CEBPZQ03701 1054 aaKnown RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 C16orf71Q8IYS4 520 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 RTF1Q92541 710 aaKnown RBP9.1□□□□□ -0.95
CDHR3-201ENST00000317716 DIAPH3Q9NSV4 1193 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 SMC3Q9UQE7 1217 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 CROCC2H7BZ55 1655 aa9.1□□□□□ -0.95
CDHR3-201ENST00000317716 KDM5CP41229 1560 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 FRMPD1Q5SYB0 1578 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 USP19O94966 1318 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 EVC2Q86UK5 1308 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 BECN2A8MW95 431 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 CAMK4Q16566 473 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 FERMT3Q86UX7 667 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 AEBP1Q8IUX7 1158 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 TERF2IPQ9NYB0 399 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 GOLGA6L19H0YKK7 550 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 HCLS1P14317 486 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms