RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 ZNF692Q9BU19 519 aaPredicted RBP26.34■■□□□ 1.81
TTC39C-202ENST00000317571 ACEP12821 1306 aa26.33■■□□□ 1.81
TTC39C-202ENST00000317571 TTC21BQ7Z4L5 1316 aa26.33■■□□□ 1.81
TTC39C-202ENST00000317571 ITPRIPQ8IWB1 547 aa26.32■■□□□ 1.8
TTC39C-202ENST00000317571 RWDD1Q9H446 243 aaPredicted RBP26.32■■□□□ 1.8
TTC39C-202ENST00000317571 OVOS2A0A0J9YW53 1432 aa26.32■■□□□ 1.8
TTC39C-202ENST00000317571 OVOS2Q6IE36 1432 aa26.32■■□□□ 1.8
TTC39C-202ENST00000317571 ARHGAP23Q9P227 1491 aa26.31■■□□□ 1.8
TTC39C-202ENST00000317571 TSPYL6Q8N831 410 aa26.31■■□□□ 1.8
TTC39C-202ENST00000317571 PEAK1Q9H792 1746 aa26.3■■□□□ 1.8
TTC39C-202ENST00000317571 SLIT1O75093 1534 aa26.3■■□□□ 1.8
TTC39C-202ENST00000317571 NEFMP07197 916 aa26.3■■□□□ 1.8
TTC39C-202ENST00000317571 ZNF853P0CG23 659 aa26.29■■□□□ 1.8
TTC39C-202ENST00000317571 ALDH1L2Q3SY69 923 aa26.29■■□□□ 1.8
TTC39C-202ENST00000317571 USP6P35125 1406 aa26.29■■□□□ 1.8
TTC39C-202ENST00000317571 NALCNQ8IZF0 1738 aa26.29■■□□□ 1.8
TTC39C-202ENST00000317571 PLEKHG3A1L390 1219 aa26.29■■□□□ 1.8
TTC39C-202ENST00000317571 RTL5Q5HYW3 569 aaPredicted RBP26.29■■□□□ 1.8
TTC39C-202ENST00000317571 PLPPR3Q6T4P5 718 aa26.29■■□□□ 1.8
TTC39C-202ENST00000317571 DDX19BQ9UMR2 479 aa26.29■■□□□ 1.8
TTC39C-202ENST00000317571 KIF16BQ96L93 1317 aa26.28■■□□□ 1.8
TTC39C-202ENST00000317571 FAM83GA6ND36 823 aa26.28■■□□□ 1.8
TTC39C-202ENST00000317571 VAMP4O75379 141 aa26.27■■□□□ 1.8
TTC39C-202ENST00000317571 AEBP1Q8IUX7 1158 aa26.27■■□□□ 1.8
TTC39C-202ENST00000317571 MBIPQ9NS73 344 aa26.27■■□□□ 1.8
TTC39C-202ENST00000317571 FER1L4A9Z1Z3 1794 aa26.26■■□□□ 1.79
TTC39C-202ENST00000317571 ZBTB40Q9NUA8 1239 aa26.26■■□□□ 1.79
TTC39C-202ENST00000317571 SSH2Q76I76 1423 aa26.26■■□□□ 1.79
TTC39C-202ENST00000317571 EIF4A2Q14240 407 aaKnown RBP26.26■■□□□ 1.79
TTC39C-202ENST00000317571 IFT57Q9NWB7 429 aa26.26■■□□□ 1.79
TTC39C-202ENST00000317571 HDAC1Q13547 482 aaPredicted RBP26.25■■□□□ 1.79
TTC39C-202ENST00000317571 AMOTL2Q9Y2J4 779 aa26.25■■□□□ 1.79
TTC39C-202ENST00000317571 BRPF1P55201 1214 aaPredicted RBP26.24■■□□□ 1.79
TTC39C-202ENST00000317571 DCTN1Q14203 1278 aa26.24■■□□□ 1.79
TTC39C-202ENST00000317571 RGPD8O14715 1765 aaPredicted RBP26.23■■□□□ 1.79
TTC39C-202ENST00000317571 GNAI1P63096 354 aa26.23■■□□□ 1.79
TTC39C-202ENST00000317571 MRPL50Q8N5N7 158 aaKnown RBP26.23■■□□□ 1.79
TTC39C-202ENST00000317571 ELL2O00472 640 aaPredicted RBP26.22■■□□□ 1.79
TTC39C-202ENST00000317571 RGPD1P0DJD0 1748 aa26.22■■□□□ 1.79
TTC39C-202ENST00000317571 EID1Q9Y6B2 187 aa26.22■■□□□ 1.79
TTC39C-202ENST00000317571 IPO8O15397 1037 aaKnown RBP26.21■■□□□ 1.79
TTC39C-202ENST00000317571 USP31Q70CQ4 1352 aa26.2■■□□□ 1.78
TTC39C-202ENST00000317571 C8orf58Q8NAV2 365 aa26.2■■□□□ 1.78
TTC39C-202ENST00000317571 PTCH1Q13635 1447 aa26.2■■□□□ 1.78
TTC39C-202ENST00000317571 CALD1Q05682 793 aaKnown RBP26.19■■□□□ 1.78
TTC39C-202ENST00000317571 HSP90AB2PQ58FF8 381 aa26.19■■□□□ 1.78
TTC39C-202ENST00000317571 ZNF428Q96B54 188 aa26.19■■□□□ 1.78
TTC39C-202ENST00000317571 CFAP44Q96MT7 982 aa26.19■■□□□ 1.78
TTC39C-202ENST00000317571 DIP2AQ14689 1571 aa26.19■■□□□ 1.78
TTC39C-202ENST00000317571 SULT6B1Q6IMI4 303 aa26.19■■□□□ 1.78
TTC39C-202ENST00000317571 TBX22Q9Y458 520 aa26.19■■□□□ 1.78
TTC39C-202ENST00000317571 SMC5Q8IY18 1101 aa26.18■■□□□ 1.78
TTC39C-202ENST00000317571 PIK3R4Q99570 1358 aa26.17■■□□□ 1.78
TTC39C-202ENST00000317571 XRN1Q8IZH2 1706 aaKnown RBP26.16■■□□□ 1.78
TTC39C-202ENST00000317571 SOX12O15370 315 aa26.16■■□□□ 1.78
TTC39C-202ENST00000317571 TWISTNBQ3B726 338 aaPredicted RBP26.16■■□□□ 1.78
TTC39C-202ENST00000317571 LMOD3Q0VAK6 560 aa26.15■■□□□ 1.78
TTC39C-202ENST00000317571 ZBTB7BO15156 539 aaPredicted RBP26.13■■□□□ 1.77
TTC39C-202ENST00000317571 FMN2Q9NZ56 1722 aa26.13■■□□□ 1.77
TTC39C-202ENST00000317571 PIK3C2AO00443 1686 aa26.12■■□□□ 1.77
TTC39C-202ENST00000317571 ARHGAP45Q92619 1136 aa26.12■■□□□ 1.77
TTC39C-202ENST00000317571 RIMS1Q86UR5 1692 aaKnown RBP26.12■■□□□ 1.77
TTC39C-202ENST00000317571 ABCC4O15439 1325 aa26.12■■□□□ 1.77
TTC39C-202ENST00000317571 MAP3K19Q56UN5 1328 aa26.12■■□□□ 1.77
TTC39C-202ENST00000317571 KRT24Q2M2I5 525 aa26.1■■□□□ 1.77
TTC39C-202ENST00000317571 C1orf115Q9H7X2 142 aa26.1■■□□□ 1.77
TTC39C-202ENST00000317571 MCM10Q7L590 875 aa26.09■■□□□ 1.77
TTC39C-202ENST00000317571 THEMISQ8N1K5 641 aaPredicted RBP26.09■■□□□ 1.77
TTC39C-202ENST00000317571 DAXXQ9UER7 740 aaPredicted RBP26.09■■□□□ 1.77
TTC39C-202ENST00000317571 TTC21AQ8NDW8 1320 aa26.08■■□□□ 1.77
TTC39C-202ENST00000317571 TBC1D32Q96NH3 1257 aa26.08■■□□□ 1.77
TTC39C-202ENST00000317571 MARF1Q9Y4F3 1742 aaKnown RBP26.06■■□□□ 1.76
TTC39C-202ENST00000317571 KCNA6P17658 529 aa26.06■■□□□ 1.76
TTC39C-202ENST00000317571 NUCB1Q02818 461 aa26.06■■□□□ 1.76
TTC39C-202ENST00000317571 USP35Q9P2H5 1018 aa26.06■■□□□ 1.76
TTC39C-202ENST00000317571 NFKBIBQ15653 356 aa26.05■■□□□ 1.76
TTC39C-202ENST00000317571 SIRT2Q8IXJ6 389 aa26.05■■□□□ 1.76
TTC39C-202ENST00000317571 NGDNQ8NEJ9 315 aaKnown RBP26.05■■□□□ 1.76
TTC39C-202ENST00000317571 CEP170BQ9Y4F5 1589 aaPredicted RBP26.04■■□□□ 1.76
TTC39C-202ENST00000317571 CHL1O00533 1208 aa26.04■■□□□ 1.76
TTC39C-202ENST00000317571 ARHGEF10O15013 1369 aa26.03■■□□□ 1.76
TTC39C-202ENST00000317571 CRB1P82279 1406 aa26.03■■□□□ 1.76
TTC39C-202ENST00000317571 FOXO3O43524 673 aa26.03■■□□□ 1.76
TTC39C-202ENST00000317571 LNPKQ9C0E8 428 aa26.03■■□□□ 1.76
TTC39C-202ENST00000317571 SBNO1A3KN83 1393 aa26.02■■□□□ 1.76
TTC39C-202ENST00000317571 RGS12O14924 1447 aa26.02■■□□□ 1.76
TTC39C-202ENST00000317571 FLT4P35916 1363 aa26.02■■□□□ 1.76
TTC39C-202ENST00000317571 KDRP35968 1356 aa26■■□□□ 1.75
TTC39C-202ENST00000317571 MTHFSDQ2M296 383 aaKnown RBP25.99■■□□□ 1.75
TTC39C-202ENST00000317571 CHD1LQ86WJ1 897 aa25.99■■□□□ 1.75
TTC39C-202ENST00000317571 ANKARQ7Z5J8 1434 aa25.98■■□□□ 1.75
TTC39C-202ENST00000317571 EYA1Q99502 592 aa25.98■■□□□ 1.75
TTC39C-202ENST00000317571 API5Q9BZZ5 524 aaKnown RBP25.98■■□□□ 1.75
TTC39C-202ENST00000317571 NUTM2GQ5VZR2 741 aa25.97■■□□□ 1.75
TTC39C-202ENST00000317571 UPF2Q9HAU5 1272 aaKnown RBP25.97■■□□□ 1.75
TTC39C-202ENST00000317571 MIS18AQ9NYP9 233 aa25.97■■□□□ 1.75
TTC39C-202ENST00000317571 IGSF1Q8N6C5 1336 aa25.96■■□□□ 1.75
TTC39C-202ENST00000317571 KIAA0232Q92628 1395 aa25.96■■□□□ 1.75
TTC39C-202ENST00000317571 MFAP1P55081 439 aaKnown RBP25.95■■□□□ 1.74
TTC39C-202ENST00000317571 NWD1Q149M9 1564 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms