RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 PPP1R9BQ96SB3 815 aa20.23■□□□□ 0.83
CACFD1-202ENST00000316948 CABP1Q9NZU7 370 aa20.23■□□□□ 0.83
CACFD1-202ENST00000316948 PTPRMP28827 1452 aa20.23■□□□□ 0.83
CACFD1-202ENST00000316948 MCTP1Q6DN14 999 aa20.22■□□□□ 0.83
CACFD1-202ENST00000316948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.22■□□□□ 0.83
CACFD1-202ENST00000316948 RBM10P98175 930 aaKnown RBP20.22■□□□□ 0.83
CACFD1-202ENST00000316948 PRKAR2BP31323 418 aa20.21■□□□□ 0.83
CACFD1-202ENST00000316948 KLHL40Q2TBA0 621 aa20.21■□□□□ 0.83
CACFD1-202ENST00000316948 HDGFL2Q7Z4V5 671 aaPredicted RBP20.21■□□□□ 0.83
CACFD1-202ENST00000316948 THUMPD2Q9BTF0 503 aaKnown RBP20.21■□□□□ 0.83
CACFD1-202ENST00000316948 CDK19Q9BWU1 502 aa20.21■□□□□ 0.83
CACFD1-202ENST00000316948 CAVIN1Q6NZI2 390 aaKnown RBP20.2■□□□□ 0.82
CACFD1-202ENST00000316948 PDCL3Q9H2J4 239 aa20.2■□□□□ 0.82
CACFD1-202ENST00000316948 SLC52A1Q9NWF4 448 aa20.2■□□□□ 0.82
CACFD1-202ENST00000316948 YTHDC2Q9H6S0 1430 aaKnown RBP20.19■□□□□ 0.82
CACFD1-202ENST00000316948 HMOX1P09601 288 aa20.19■□□□□ 0.82
CACFD1-202ENST00000316948 PPIP5K1Q6PFW1 1433 aa20.18■□□□□ 0.82
CACFD1-202ENST00000316948 GCC1Q96CN9 775 aa20.18■□□□□ 0.82
CACFD1-202ENST00000316948 PNPLA6Q8IY17 1366 aa20.18■□□□□ 0.82
CACFD1-202ENST00000316948 ZFYVE9O95405 1425 aa20.18■□□□□ 0.82
CACFD1-202ENST00000316948 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
CACFD1-202ENST00000316948 ZBTB7BO15156 539 aaPredicted RBP20.18■□□□□ 0.82
CACFD1-202ENST00000316948 OFD1O75665 1012 aa20.18■□□□□ 0.82
CACFD1-202ENST00000316948 ANKRD26Q9UPS8 1709 aa20.18■□□□□ 0.82
CACFD1-202ENST00000316948 DIP2CQ9Y2E4 1556 aa20.18■□□□□ 0.82
CACFD1-202ENST00000316948 ALDH1L2Q3SY69 923 aa20.17■□□□□ 0.82
CACFD1-202ENST00000316948 PHACTR3Q96KR7 559 aa20.17■□□□□ 0.82
CACFD1-202ENST00000316948 LRRC7Q96NW7 1537 aa20.17■□□□□ 0.82
CACFD1-202ENST00000316948 FCHSD2O94868 740 aa20.17■□□□□ 0.82
CACFD1-202ENST00000316948 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
CACFD1-202ENST00000316948 FBXO31Q5XUX0 539 aaPredicted RBP20.17■□□□□ 0.82
CACFD1-202ENST00000316948 R3HCC1Q9Y3T6 440 aaKnown RBP20.17■□□□□ 0.82
CACFD1-202ENST00000316948 ARHGAP31Q2M1Z3 1444 aa20.16■□□□□ 0.82
CACFD1-202ENST00000316948 MED14O60244 1454 aa20.16■□□□□ 0.82
CACFD1-202ENST00000316948 CDC45O75419 566 aa20.16■□□□□ 0.82
CACFD1-202ENST00000316948 POLKQ9UBT6 870 aa20.16■□□□□ 0.82
CACFD1-202ENST00000316948 PKP1Q13835 747 aa20.15■□□□□ 0.82
CACFD1-202ENST00000316948 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.15■□□□□ 0.82
CACFD1-202ENST00000316948 SIRT2Q8IXJ6 389 aa20.15■□□□□ 0.82
CACFD1-202ENST00000316948 TSPYL6Q8N831 410 aa20.15■□□□□ 0.82
CACFD1-202ENST00000316948 YEATS2Q9ULM3 1422 aa20.15■□□□□ 0.82
CACFD1-202ENST00000316948 ZSCAN23Q3MJ62 389 aa20.15■□□□□ 0.82
CACFD1-202ENST00000316948 FAM13BQ9NYF5 915 aa20.14■□□□□ 0.81
CACFD1-202ENST00000316948 RBSNQ9H1K0 784 aa20.13■□□□□ 0.81
CACFD1-202ENST00000316948 CLEC17AQ6ZS10 378 aa20.13■□□□□ 0.81
CACFD1-202ENST00000316948 WAPLQ7Z5K2 1190 aa20.13■□□□□ 0.81
CACFD1-202ENST00000316948 TMEM131LA2VDJ0 1609 aa20.13■□□□□ 0.81
CACFD1-202ENST00000316948 XPCQ01831 940 aaPredicted RBP20.12■□□□□ 0.81
CACFD1-202ENST00000316948 VAMP4O75379 141 aa20.12■□□□□ 0.81
CACFD1-202ENST00000316948 GSPT1P15170 499 aaKnown RBP20.12■□□□□ 0.81
CACFD1-202ENST00000316948 FAM135BQ49AJ0 1406 aa20.12■□□□□ 0.81
CACFD1-202ENST00000316948 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
CACFD1-202ENST00000316948 PRPF40AO75400 957 aaKnown RBP20.11■□□□□ 0.81
CACFD1-202ENST00000316948 PRIM1P49642 420 aaKnown RBP20.11■□□□□ 0.81
CACFD1-202ENST00000316948 ZNF445P59923 1031 aa20.11■□□□□ 0.81
CACFD1-202ENST00000316948 LMBRD1Q9NUN5 540 aa20.11■□□□□ 0.81
CACFD1-202ENST00000316948 STAG3Q9UJ98 1225 aa20.11■□□□□ 0.81
CACFD1-202ENST00000316948 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
CACFD1-202ENST00000316948 CLTCQ00610 1675 aaKnown RBP20.11■□□□□ 0.81
CACFD1-202ENST00000316948 IBTKQ9P2D0 1353 aaPredicted RBP20.11■□□□□ 0.81
CACFD1-202ENST00000316948 MRPL50Q8N5N7 158 aaKnown RBP20.11■□□□□ 0.81
CACFD1-202ENST00000316948 ARHGEF40Q8TER5 1519 aa20.11■□□□□ 0.81
CACFD1-202ENST00000316948 KIF20BQ96Q89 1820 aa20.1■□□□□ 0.81
CACFD1-202ENST00000316948 NFE2L2Q16236 605 aa20.1■□□□□ 0.81
CACFD1-202ENST00000316948 AK9Q5TCS8 1911 aa20.1■□□□□ 0.81
CACFD1-202ENST00000316948 NUCB2P80303 420 aa20.1■□□□□ 0.81
CACFD1-202ENST00000316948 RABEP1Q15276 862 aa20.1■□□□□ 0.81
CACFD1-202ENST00000316948 CHAMP1Q96JM3 812 aa20.1■□□□□ 0.81
CACFD1-202ENST00000316948 NEO1Q92859 1461 aa20.1■□□□□ 0.81
CACFD1-202ENST00000316948 PREX1Q8TCU6 1659 aa20.09■□□□□ 0.81
CACFD1-202ENST00000316948 ARID3AQ99856 593 aa20.09■□□□□ 0.81
CACFD1-202ENST00000316948 C16orf71Q8IYS4 520 aaPredicted RBP20.08■□□□□ 0.81
CACFD1-202ENST00000316948 CHMP4BQ9H444 224 aaKnown RBP20.08■□□□□ 0.81
CACFD1-202ENST00000316948 ALKQ9UM73 1620 aa20.08■□□□□ 0.8
CACFD1-202ENST00000316948 ZGPATQ8N5A5 531 aaKnown RBP20.08■□□□□ 0.8
CACFD1-202ENST00000316948 MBIPQ9NS73 344 aa20.08■□□□□ 0.8
CACFD1-202ENST00000316948 MAP2P11137 1827 aaKnown RBP20.08■□□□□ 0.8
CACFD1-202ENST00000316948 BRPF1P55201 1214 aaPredicted RBP20.07■□□□□ 0.8
CACFD1-202ENST00000316948 FOXD4L5Q5VV16 416 aaPredicted RBP20.07■□□□□ 0.8
CACFD1-202ENST00000316948 FOXD4L4Q8WXT5 416 aaPredicted RBP20.07■□□□□ 0.8
CACFD1-202ENST00000316948 ZRANB1Q9UGI0 708 aa20.07■□□□□ 0.8
CACFD1-202ENST00000316948 PLEKHM2Q8IWE5 1019 aa20.07■□□□□ 0.8
CACFD1-202ENST00000316948 NOL7Q9UMY1 257 aaKnown RBP20.07■□□□□ 0.8
CACFD1-202ENST00000316948 ZNF428Q96B54 188 aa20.06■□□□□ 0.8
CACFD1-202ENST00000316948 CYB5RLQ6IPT4 315 aa20.06■□□□□ 0.8
CACFD1-202ENST00000316948 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.06■□□□□ 0.8
CACFD1-202ENST00000316948 APBB1O00213 710 aa20.06■□□□□ 0.8
CACFD1-202ENST00000316948 CDC42BPGQ6DT37 1551 aa20.06■□□□□ 0.8
CACFD1-202ENST00000316948 NME9Q86XW9 330 aa20.05■□□□□ 0.8
CACFD1-202ENST00000316948 GPT2Q8TD30 523 aa20.05■□□□□ 0.8
CACFD1-202ENST00000316948 GNAI1P63096 354 aa20.05■□□□□ 0.8
CACFD1-202ENST00000316948 USP26Q9BXU7 913 aa20.05■□□□□ 0.8
CACFD1-202ENST00000316948 RICTORQ6R327 1708 aa20.04■□□□□ 0.8
CACFD1-202ENST00000316948 UQCRHLA0A096LP55 91 aa20.04■□□□□ 0.8
CACFD1-202ENST00000316948 FAM83GA6ND36 823 aa20.04■□□□□ 0.8
CACFD1-202ENST00000316948 CYP2E1P05181 493 aaPredicted RBP20.04■□□□□ 0.8
CACFD1-202ENST00000316948 UQCRHP07919 91 aa20.04■□□□□ 0.8
CACFD1-202ENST00000316948 TWISTNBQ3B726 338 aaPredicted RBP20.04■□□□□ 0.8
CACFD1-202ENST00000316948 C8orf58Q8NAV2 365 aa20.04■□□□□ 0.8
CACFD1-202ENST00000316948 ARHGAP45Q92619 1136 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms