RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 CALD1Q05682 793 aaKnown RBP24.86■■□□□ 1.57
AP3S1-201ENST00000316788 CPS1P31327 1500 aa24.85■■□□□ 1.57
AP3S1-201ENST00000316788 WASLO00401 505 aaPredicted RBP24.85■■□□□ 1.57
AP3S1-201ENST00000316788 NFKBIBQ15653 356 aa24.84■■□□□ 1.57
AP3S1-201ENST00000316788 DIP2AQ14689 1571 aa24.83■■□□□ 1.57
AP3S1-201ENST00000316788 BECN1Q14457 450 aa24.83■■□□□ 1.57
AP3S1-201ENST00000316788 UPF2Q9HAU5 1272 aaKnown RBP24.83■■□□□ 1.57
AP3S1-201ENST00000316788 WAPLQ7Z5K2 1190 aa24.82■■□□□ 1.56
AP3S1-201ENST00000316788 MON2Q7Z3U7 1717 aa24.81■■□□□ 1.56
AP3S1-201ENST00000316788 SLC4A3P48751 1232 aa24.81■■□□□ 1.56
AP3S1-201ENST00000316788 NFE2L2Q16236 605 aa24.81■■□□□ 1.56
AP3S1-201ENST00000316788 ZNF335Q9H4Z2 1342 aaPredicted RBP24.8■■□□□ 1.56
AP3S1-201ENST00000316788 PRKAR2BP31323 418 aa24.8■■□□□ 1.56
AP3S1-201ENST00000316788 SMC5Q8IY18 1101 aa24.8■■□□□ 1.56
AP3S1-201ENST00000316788 NOB1Q9ULX3 412 aaKnown RBP24.8■■□□□ 1.56
AP3S1-201ENST00000316788 TBC1D32Q96NH3 1257 aa24.79■■□□□ 1.56
AP3S1-201ENST00000316788 AMOTL2Q9Y2J4 779 aa24.79■■□□□ 1.56
AP3S1-201ENST00000316788 SEC24BO95487 1268 aa24.78■■□□□ 1.56
AP3S1-201ENST00000316788 ZBTB40Q9NUA8 1239 aa24.78■■□□□ 1.56
AP3S1-201ENST00000316788 PIK3R4Q99570 1358 aa24.78■■□□□ 1.56
AP3S1-201ENST00000316788 CHMP4BQ9H444 224 aaKnown RBP24.78■■□□□ 1.56
AP3S1-201ENST00000316788 KCNA6P17658 529 aa24.77■■□□□ 1.56
AP3S1-201ENST00000316788 IL13P35225 146 aa24.77■■□□□ 1.56
AP3S1-201ENST00000316788 ITPRIPQ8IWB1 547 aa24.77■■□□□ 1.56
AP3S1-201ENST00000316788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.77■■□□□ 1.568e-8■□□□□ 10.9
AP3S1-201ENST00000316788 ARHGAP45Q92619 1136 aa24.77■■□□□ 1.56
AP3S1-201ENST00000316788 STRCP1A6NGW2 1772 aa24.76■■□□□ 1.55
AP3S1-201ENST00000316788 RBM33Q96EV2 1170 aaKnown RBP24.75■■□□□ 1.55
AP3S1-201ENST00000316788 IFT57Q9NWB7 429 aa24.75■■□□□ 1.55
AP3S1-201ENST00000316788 AKAP12Q02952 1782 aa24.75■■□□□ 1.55
AP3S1-201ENST00000316788 PTCH1Q13635 1447 aa24.75■■□□□ 1.55
AP3S1-201ENST00000316788 LMOD3Q0VAK6 560 aa24.75■■□□□ 1.55
AP3S1-201ENST00000316788 TMEM57Q8N5G2 664 aa24.75■■□□□ 1.55
AP3S1-201ENST00000316788 CCDC61Q9Y6R9 512 aa24.75■■□□□ 1.55
AP3S1-201ENST00000316788 CHD2O14647 1828 aaKnown RBP24.74■■□□□ 1.55
AP3S1-201ENST00000316788 GNAI1P63096 354 aa24.74■■□□□ 1.55
AP3S1-201ENST00000316788 ZNF692Q9BU19 519 aaPredicted RBP24.74■■□□□ 1.55
AP3S1-201ENST00000316788 ZNF853P0CG23 659 aa24.73■■□□□ 1.55
AP3S1-201ENST00000316788 NUDT16Q96DE0 195 aaKnown RBP24.73■■□□□ 1.55
AP3S1-201ENST00000316788 NRKQ7Z2Y5 1582 aa24.73■■□□□ 1.55
AP3S1-201ENST00000316788 ROBO2Q9HCK4 1378 aa24.73■■□□□ 1.55
AP3S1-201ENST00000316788 MAP2P11137 1827 aaKnown RBP24.72■■□□□ 1.55
AP3S1-201ENST00000316788 XRN1Q8IZH2 1706 aaKnown RBP24.72■■□□□ 1.55
AP3S1-201ENST00000316788 COG3Q96JB2 828 aa24.71■■□□□ 1.55
AP3S1-201ENST00000316788 ITSN1Q15811 1721 aa24.7■■□□□ 1.55
AP3S1-201ENST00000316788 GSE1Q14687 1217 aa24.69■■□□□ 1.54
AP3S1-201ENST00000316788 NME9Q86XW9 330 aa24.69■■□□□ 1.54
AP3S1-201ENST00000316788 NWD1Q149M9 1564 aa24.69■■□□□ 1.54
AP3S1-201ENST00000316788 EMILIN1Q9Y6C2 1016 aa24.69■■□□□ 1.54
AP3S1-201ENST00000316788 VAMP4O75379 141 aa24.68■■□□□ 1.54
AP3S1-201ENST00000316788 MRPL50Q8N5N7 158 aaKnown RBP24.68■■□□□ 1.54
AP3S1-201ENST00000316788 PHACTR3Q96KR7 559 aa24.68■■□□□ 1.54
AP3S1-201ENST00000316788 KIF24Q5T7B8 1368 aa24.66■■□□□ 1.54
AP3S1-201ENST00000316788 NUCB1Q02818 461 aa24.66■■□□□ 1.54
AP3S1-201ENST00000316788 TOPAZ1Q8N9V7 1692 aa24.65■■□□□ 1.54
AP3S1-201ENST00000316788 CFAP44Q96MT7 982 aa24.64■■□□□ 1.54
AP3S1-201ENST00000316788 HMOX1P09601 288 aa24.64■■□□□ 1.53
AP3S1-201ENST00000316788 ABCC4O15439 1325 aa24.63■■□□□ 1.53
AP3S1-201ENST00000316788 PROSER2Q86WR7 435 aaPredicted RBP24.63■■□□□ 1.53
AP3S1-201ENST00000316788 LTBP4Q8N2S1 1624 aa24.62■■□□□ 1.53
AP3S1-201ENST00000316788 PRR36Q9H6K5 1346 aa24.62■■□□□ 1.53
AP3S1-201ENST00000316788 ZBTB7BO15156 539 aaPredicted RBP24.61■■□□□ 1.53
AP3S1-201ENST00000316788 FBLN1P23142 703 aa24.61■■□□□ 1.53
AP3S1-201ENST00000316788 GCC1Q96CN9 775 aa24.61■■□□□ 1.53
AP3S1-201ENST00000316788 ANTXR1Q9H6X2 564 aa24.61■■□□□ 1.53
AP3S1-201ENST00000316788 OVOS2A0A0J9YW53 1432 aa24.61■■□□□ 1.53
AP3S1-201ENST00000316788 OVOS2Q6IE36 1432 aa24.61■■□□□ 1.53
AP3S1-201ENST00000316788 MBIPQ9NS73 344 aa24.61■■□□□ 1.53
AP3S1-201ENST00000316788 PLEKHG3A1L390 1219 aa24.6■■□□□ 1.53
AP3S1-201ENST00000316788 FRAT2O75474 233 aaPredicted RBP24.6■■□□□ 1.53
AP3S1-201ENST00000316788 TMEM94Q12767 1356 aa24.59■■□□□ 1.53
AP3S1-201ENST00000316788 TBC1D2Q9BYX2 928 aa24.59■■□□□ 1.53
AP3S1-201ENST00000316788 API5Q9BZZ5 524 aaKnown RBP24.59■■□□□ 1.53
AP3S1-201ENST00000316788 HAP1P54257 671 aaPredicted RBP24.58■■□□□ 1.53
AP3S1-201ENST00000316788 ZRANB1Q9UGI0 708 aa24.58■■□□□ 1.53
AP3S1-201ENST00000316788 CHD1LQ86WJ1 897 aa24.58■■□□□ 1.52
AP3S1-201ENST00000316788 C22orf23Q9BZE7 217 aa24.58■■□□□ 1.52
AP3S1-201ENST00000316788 NALCNQ8IZF0 1738 aa24.57■■□□□ 1.52
AP3S1-201ENST00000316788 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.57■■□□□ 1.52
AP3S1-201ENST00000316788 TWISTNBQ3B726 338 aaPredicted RBP24.57■■□□□ 1.52
AP3S1-201ENST00000316788 TTC21BQ7Z4L5 1316 aa24.57■■□□□ 1.52
AP3S1-201ENST00000316788 USP31Q70CQ4 1352 aa24.56■■□□□ 1.52
AP3S1-201ENST00000316788 TSPYL6Q8N831 410 aa24.55■■□□□ 1.52
AP3S1-201ENST00000316788 BMP2KLQ5H9B9 411 aa24.55■■□□□ 1.52
AP3S1-201ENST00000316788 THUMPD2Q9BTF0 503 aaKnown RBP24.55■■□□□ 1.52
AP3S1-201ENST00000316788 DLG5Q8TDM6 1919 aa24.55■■□□□ 1.52
AP3S1-201ENST00000316788 USP6P35125 1406 aa24.54■■□□□ 1.52
AP3S1-201ENST00000316788 XIRP1Q702N8 1843 aaKnown RBP24.53■■□□□ 1.52
AP3S1-201ENST00000316788 RRS1Q15050 365 aaKnown RBP24.53■■□□□ 1.52
AP3S1-201ENST00000316788 SSH2Q76I76 1423 aa24.53■■□□□ 1.52
AP3S1-201ENST00000316788 RBM25P49756 843 aaKnown RBP24.52■■□□□ 1.52
AP3S1-201ENST00000316788 RGPD1P0DJD0 1748 aa24.52■■□□□ 1.52
AP3S1-201ENST00000316788 C14orf37Q86TY3 774 aa24.52■■□□□ 1.52
AP3S1-201ENST00000316788 KIAA0232Q92628 1395 aa24.52■■□□□ 1.52
AP3S1-201ENST00000316788 EIF4A2Q14240 407 aaKnown RBP24.51■■□□□ 1.51
AP3S1-201ENST00000316788 MFAP1P55081 439 aaKnown RBP24.5■■□□□ 1.51
AP3S1-201ENST00000316788 C8orf58Q8NAV2 365 aa24.49■■□□□ 1.51
AP3S1-201ENST00000316788 ACEP12821 1306 aa24.49■■□□□ 1.51
AP3S1-201ENST00000316788 TTC21AQ8NDW8 1320 aa24.49■■□□□ 1.51
AP3S1-201ENST00000316788 EIF5BO60841 1220 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms