RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 NLRP6P59044 892 aa23.69■■□□□ 1.38
CCDC43-201ENST00000315286 SULT6B1Q6IMI4 303 aa23.69■■□□□ 1.38
CCDC43-201ENST00000315286 COG6Q9Y2V7 657 aa23.69■■□□□ 1.38
CCDC43-201ENST00000315286 THUMPD2Q9BTF0 503 aaKnown RBP23.69■■□□□ 1.38
CCDC43-201ENST00000315286 PHF8Q9UPP1 1060 aa23.69■■□□□ 1.38
CCDC43-201ENST00000315286 ADGRL3Q9HAR2 1447 aa23.68■■□□□ 1.38
CCDC43-201ENST00000315286 TNNQ9UQP3 1299 aa23.68■■□□□ 1.38
CCDC43-201ENST00000315286 NUTM2GQ5VZR2 741 aa23.66■■□□□ 1.38
CCDC43-201ENST00000315286 CENPQQ7L2Z9 268 aaPredicted RBP23.66■■□□□ 1.38
CCDC43-201ENST00000315286 RLBP1P12271 317 aa23.66■■□□□ 1.38
CCDC43-201ENST00000315286 LAS1LQ9Y4W2 734 aaKnown RBP23.66■■□□□ 1.38
CCDC43-201ENST00000315286 RGPD1P0DJD0 1748 aa23.65■■□□□ 1.38
CCDC43-201ENST00000315286 SBNO1A3KN83 1393 aa23.65■■□□□ 1.38
CCDC43-201ENST00000315286 TCERG1O14776 1098 aaKnown RBP23.65■■□□□ 1.38
CCDC43-201ENST00000315286 PAK3O75914 559 aaPredicted RBP23.65■■□□□ 1.38
CCDC43-201ENST00000315286 ABTB2Q8N961 1025 aa23.65■■□□□ 1.38
CCDC43-201ENST00000315286 MARF1Q9Y4F3 1742 aaKnown RBP23.65■■□□□ 1.38
CCDC43-201ENST00000315286 CALD1Q05682 793 aaKnown RBP23.64■■□□□ 1.38
CCDC43-201ENST00000315286 SSH1Q8WYL5 1049 aa23.64■■□□□ 1.38
CCDC43-201ENST00000315286 FLT4P35916 1363 aa23.64■■□□□ 1.37
CCDC43-201ENST00000315286 SMC4Q9NTJ3 1288 aa23.64■■□□□ 1.37
CCDC43-201ENST00000315286 C14orf37Q86TY3 774 aa23.63■■□□□ 1.37
CCDC43-201ENST00000315286 SKAP1Q86WV1 359 aa23.63■■□□□ 1.37
CCDC43-201ENST00000315286 AMPHP49418 695 aa23.63■■□□□ 1.37
CCDC43-201ENST00000315286 LMOD3Q0VAK6 560 aa23.63■■□□□ 1.37
CCDC43-201ENST00000315286 ESCO1Q5FWF5 840 aa23.62■■□□□ 1.37
CCDC43-201ENST00000315286 ZKSCAN2Q63HK3 967 aa23.62■■□□□ 1.37
CCDC43-201ENST00000315286 CLUAP1Q96AJ1 413 aa23.62■■□□□ 1.37
CCDC43-201ENST00000315286 FAM83GA6ND36 823 aa23.61■■□□□ 1.37
CCDC43-201ENST00000315286 IFT57Q9NWB7 429 aa23.61■■□□□ 1.37
CCDC43-201ENST00000315286 ZNF853P0CG23 659 aa23.61■■□□□ 1.37
CCDC43-201ENST00000315286 USP54Q70EL1 1684 aa23.61■■□□□ 1.37
CCDC43-201ENST00000315286 GNAI1P63096 354 aa23.6■■□□□ 1.37
CCDC43-201ENST00000315286 NWD1Q149M9 1564 aa23.6■■□□□ 1.37
CCDC43-201ENST00000315286 DCTN1Q14203 1278 aa23.59■■□□□ 1.37
CCDC43-201ENST00000315286 ARHGEF10O15013 1369 aa23.58■■□□□ 1.37
CCDC43-201ENST00000315286 MBIPQ9NS73 344 aa23.58■■□□□ 1.36
CCDC43-201ENST00000315286 PSME1Q06323 249 aa23.57■■□□□ 1.36
CCDC43-201ENST00000315286 CFAP44Q96MT7 982 aa23.57■■□□□ 1.36
CCDC43-201ENST00000315286 IGHDP01880 384 aa23.56■■□□□ 1.36
CCDC43-201ENST00000315286 MS4A1P11836 297 aa23.56■■□□□ 1.36
CCDC43-201ENST00000315286 PROSER2Q86WR7 435 aaPredicted RBP23.56■■□□□ 1.36
CCDC43-201ENST00000315286 DZIP1LQ8IYY4 767 aaKnown RBP23.56■■□□□ 1.36
CCDC43-201ENST00000315286 EYA1Q99502 592 aa23.56■■□□□ 1.36
CCDC43-201ENST00000315286 NOB1Q9ULX3 412 aaKnown RBP23.56■■□□□ 1.36
CCDC43-201ENST00000315286 HOXC9P31274 260 aa23.55■■□□□ 1.36
CCDC43-201ENST00000315286 ALDH1L2Q3SY69 923 aa23.55■■□□□ 1.36
CCDC43-201ENST00000315286 ORAI2Q96SN7 254 aa23.55■■□□□ 1.36
CCDC43-201ENST00000315286 TRIM27P14373 513 aa23.55■■□□□ 1.36
CCDC43-201ENST00000315286 AAMPQ13685 434 aa23.55■■□□□ 1.36
CCDC43-201ENST00000315286 FTSJ3Q8IY81 847 aaKnown RBP23.55■■□□□ 1.36
CCDC43-201ENST00000315286 KIF24Q5T7B8 1368 aa23.54■■□□□ 1.36
CCDC43-201ENST00000315286 VAMP4O75379 141 aa23.54■■□□□ 1.36
CCDC43-201ENST00000315286 MVPQ14764 893 aaKnown RBP23.54■■□□□ 1.36
CCDC43-201ENST00000315286 TSPYL6Q8N831 410 aa23.54■■□□□ 1.36
CCDC43-201ENST00000315286 ATF7IPQ6VMQ6 1270 aa23.53■■□□□ 1.36
CCDC43-201ENST00000315286 IGSF1Q8N6C5 1336 aa23.53■■□□□ 1.36
CCDC43-201ENST00000315286 KDRP35968 1356 aa23.53■■□□□ 1.36
CCDC43-201ENST00000315286 ZNF428Q96B54 188 aa23.53■■□□□ 1.36
CCDC43-201ENST00000315286 PDE4AP27815 886 aa23.51■■□□□ 1.35
CCDC43-201ENST00000315286 PCDHB15Q9Y5E8 787 aa23.51■■□□□ 1.35
CCDC43-201ENST00000315286 ELL2O00472 640 aaPredicted RBP23.5■■□□□ 1.35
CCDC43-201ENST00000315286 FOXO3O43524 673 aa23.5■■□□□ 1.35
CCDC43-201ENST00000315286 MCM10Q7L590 875 aa23.5■■□□□ 1.35
CCDC43-201ENST00000315286 KIF16BQ96L93 1317 aa23.5■■□□□ 1.35
CCDC43-201ENST00000315286 IPO8O15397 1037 aaKnown RBP23.49■■□□□ 1.35
CCDC43-201ENST00000315286 BRPF1P55201 1214 aaPredicted RBP23.49■■□□□ 1.35
CCDC43-201ENST00000315286 MTHFSDQ2M296 383 aaKnown RBP23.49■■□□□ 1.35
CCDC43-201ENST00000315286 C8orf58Q8NAV2 365 aa23.49■■□□□ 1.35
CCDC43-201ENST00000315286 LTN1O94822 1766 aa23.48■■□□□ 1.35
CCDC43-201ENST00000315286 XPCQ01831 940 aaPredicted RBP23.48■■□□□ 1.35
CCDC43-201ENST00000315286 TWISTNBQ3B726 338 aaPredicted RBP23.48■■□□□ 1.35
CCDC43-201ENST00000315286 C19orf44Q9H6X5 657 aa23.48■■□□□ 1.35
CCDC43-201ENST00000315286 LTV1Q96GA3 475 aaPredicted RBP23.47■■□□□ 1.35
CCDC43-201ENST00000315286 BACH2Q9BYV9 841 aa23.47■■□□□ 1.35
CCDC43-201ENST00000315286 MRPL50Q8N5N7 158 aaKnown RBP23.46■■□□□ 1.35
CCDC43-201ENST00000315286 NFAT5O94916 1531 aa23.46■■□□□ 1.35
CCDC43-201ENST00000315286 CHL1O00533 1208 aa23.45■■□□□ 1.35
CCDC43-201ENST00000315286 RTL1A6NKG5 1358 aa23.45■■□□□ 1.34
CCDC43-201ENST00000315286 ITPRIPQ8IWB1 547 aa23.45■■□□□ 1.34
CCDC43-201ENST00000315286 TMEM57Q8N5G2 664 aa23.45■■□□□ 1.34
CCDC43-201ENST00000315286 MSH5O43196 834 aa23.44■■□□□ 1.34
CCDC43-201ENST00000315286 IP6K1Q92551 441 aa23.44■■□□□ 1.34
CCDC43-201ENST00000315286 DDX19BQ9UMR2 479 aa23.44■■□□□ 1.34
CCDC43-201ENST00000315286 HSPA2P54652 639 aa23.44■■□□□ 1.34
CCDC43-201ENST00000315286 KCNH5Q8NCM2 988 aa23.44■■□□□ 1.34
CCDC43-201ENST00000315286 C1orf167Q5SNV9 1468 aa23.43■■□□□ 1.34
CCDC43-201ENST00000315286 STRCP1A6NGW2 1772 aa23.43■■□□□ 1.34
CCDC43-201ENST00000315286 RGS3P49796 1198 aa23.43■■□□□ 1.34
CCDC43-201ENST00000315286 CRB1P82279 1406 aa23.43■■□□□ 1.34
CCDC43-201ENST00000315286 GAS2L2Q8NHY3 880 aa23.42■■□□□ 1.34
CCDC43-201ENST00000315286 TMEM94Q12767 1356 aa23.41■■□□□ 1.34
CCDC43-201ENST00000315286 RTF1Q92541 710 aaKnown RBP23.41■■□□□ 1.34
CCDC43-201ENST00000315286 KRT28Q7Z3Y7 464 aa23.4■■□□□ 1.34
CCDC43-201ENST00000315286 ARHGAP45Q92619 1136 aa23.4■■□□□ 1.34
CCDC43-201ENST00000315286 KRT24Q2M2I5 525 aa23.39■■□□□ 1.34
CCDC43-201ENST00000315286 RWDD1Q9H446 243 aaPredicted RBP23.39■■□□□ 1.34
CCDC43-201ENST00000315286 ZBTB7CA1YPR0 619 aa23.39■■□□□ 1.33
CCDC43-201ENST00000315286 LMOD2Q6P5Q4 547 aa23.39■■□□□ 1.33
CCDC43-201ENST00000315286 TRPM3Q9HCF6 1732 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms