RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 SMC4Q9NTJ3 1288 aa24.49■■□□□ 1.51
CD55-201ENST00000314754 IGHDP01880 384 aa24.48■■□□□ 1.51
CD55-201ENST00000314754 KCNA6P17658 529 aa24.48■■□□□ 1.51
CD55-201ENST00000314754 ANKARQ7Z5J8 1434 aa24.47■■□□□ 1.51
CD55-201ENST00000314754 ZNF142P52746 1687 aaPredicted RBP24.47■■□□□ 1.51
CD55-201ENST00000314754 SSH1Q8WYL5 1049 aa24.47■■□□□ 1.51
CD55-201ENST00000314754 THUMPD2Q9BTF0 503 aaKnown RBP24.47■■□□□ 1.51
CD55-201ENST00000314754 LMOD3Q0VAK6 560 aa24.45■■□□□ 1.5
CD55-201ENST00000314754 DZIP1LQ8IYY4 767 aaKnown RBP24.45■■□□□ 1.5
CD55-201ENST00000314754 ADAMTSL3P82987 1691 aa24.44■■□□□ 1.5
CD55-201ENST00000314754 MVPQ14764 893 aaKnown RBP24.44■■□□□ 1.5
CD55-201ENST00000314754 FTSJ3Q8IY81 847 aaKnown RBP24.44■■□□□ 1.5
CD55-201ENST00000314754 FMN2Q9NZ56 1722 aa24.43■■□□□ 1.5
CD55-201ENST00000314754 EIF4A2Q14240 407 aaKnown RBP24.43■■□□□ 1.5
CD55-201ENST00000314754 NGDNQ8NEJ9 315 aaKnown RBP24.43■■□□□ 1.5
CD55-201ENST00000314754 ZNF428Q96B54 188 aa24.43■■□□□ 1.5
CD55-201ENST00000314754 PIK3C2AO00443 1686 aa24.43■■□□□ 1.5
CD55-201ENST00000314754 CHD2O14647 1828 aaKnown RBP24.43■■□□□ 1.5
CD55-201ENST00000314754 SOX12O15370 315 aa24.43■■□□□ 1.5
CD55-201ENST00000314754 ERICH6Q7L0X2 663 aa24.43■■□□□ 1.5
CD55-201ENST00000314754 ANKLE2Q86XL3 938 aa24.42■■□□□ 1.5
CD55-201ENST00000314754 IPO9Q96P70 1041 aaKnown RBP24.42■■□□□ 1.5
CD55-201ENST00000314754 IFT57Q9NWB7 429 aa24.42■■□□□ 1.5
CD55-201ENST00000314754 ALDH1L2Q3SY69 923 aa24.42■■□□□ 1.5
CD55-201ENST00000314754 LAS1LQ9Y4W2 734 aaKnown RBP24.42■■□□□ 1.5
CD55-201ENST00000314754 KIF16BQ96L93 1317 aa24.42■■□□□ 1.5
CD55-201ENST00000314754 TRIM27P14373 513 aa24.41■■□□□ 1.5
CD55-201ENST00000314754 GNAI1P63096 354 aa24.41■■□□□ 1.5
CD55-201ENST00000314754 ATF7IPQ6VMQ6 1270 aa24.41■■□□□ 1.5
CD55-201ENST00000314754 AEBP1Q8IUX7 1158 aa24.41■■□□□ 1.5
CD55-201ENST00000314754 RGPD1P0DJD0 1748 aa24.4■■□□□ 1.5
CD55-201ENST00000314754 SETD1BQ9UPS6 1966 aaKnown RBP24.4■■□□□ 1.5
CD55-201ENST00000314754 ZNF853P0CG23 659 aa24.39■■□□□ 1.49
CD55-201ENST00000314754 PCDHB15Q9Y5E8 787 aa24.39■■□□□ 1.49
CD55-201ENST00000314754 RGS3P49796 1198 aa24.38■■□□□ 1.49
CD55-201ENST00000314754 HSP90AB2PQ58FF8 381 aa24.38■■□□□ 1.49
CD55-201ENST00000314754 MARF1Q9Y4F3 1742 aaKnown RBP24.38■■□□□ 1.49
CD55-201ENST00000314754 IPO8O15397 1037 aaKnown RBP24.38■■□□□ 1.49
CD55-201ENST00000314754 NOP58Q9Y2X3 529 aaKnown RBP24.38■■□□□ 1.49
CD55-201ENST00000314754 BRPF1P55201 1214 aaPredicted RBP24.37■■□□□ 1.49
CD55-201ENST00000314754 SULT6B1Q6IMI4 303 aa24.37■■□□□ 1.49
CD55-201ENST00000314754 NOB1Q9ULX3 412 aaKnown RBP24.37■■□□□ 1.49
CD55-201ENST00000314754 FAM83GA6ND36 823 aa24.37■■□□□ 1.49
CD55-201ENST00000314754 FAM161AQ3B820 660 aa24.37■■□□□ 1.49
CD55-201ENST00000314754 NPM2Q86SE8 214 aaKnown RBP24.37■■□□□ 1.49
CD55-201ENST00000314754 MAP3K19Q56UN5 1328 aa24.36■■□□□ 1.49
CD55-201ENST00000314754 CFAP44Q96MT7 982 aa24.35■■□□□ 1.49
CD55-201ENST00000314754 DDX19BQ9UMR2 479 aa24.35■■□□□ 1.49
CD55-201ENST00000314754 SBNO1A3KN83 1393 aa24.35■■□□□ 1.49
CD55-201ENST00000314754 RBM33Q96EV2 1170 aaKnown RBP24.34■■□□□ 1.49
CD55-201ENST00000314754 MBIPQ9NS73 344 aa24.34■■□□□ 1.49
CD55-201ENST00000314754 FLT4P35916 1363 aa24.34■■□□□ 1.49
CD55-201ENST00000314754 DCTN1Q14203 1278 aa24.33■■□□□ 1.49
CD55-201ENST00000314754 RWDD1Q9H446 243 aaPredicted RBP24.33■■□□□ 1.49
CD55-201ENST00000314754 ARHGEF10O15013 1369 aa24.33■■□□□ 1.48
CD55-201ENST00000314754 C8orf34Q49A92 452 aa24.33■■□□□ 1.48
CD55-201ENST00000314754 VAMP4O75379 141 aa24.32■■□□□ 1.48
CD55-201ENST00000314754 PAK3O75914 559 aaPredicted RBP24.32■■□□□ 1.48
CD55-201ENST00000314754 TSPYL6Q8N831 410 aa24.32■■□□□ 1.48
CD55-201ENST00000314754 USP54Q70EL1 1684 aa24.31■■□□□ 1.48
CD55-201ENST00000314754 ITPRIPQ8IWB1 547 aa24.31■■□□□ 1.48
CD55-201ENST00000314754 VIRMAQ69YN4 1812 aaKnown RBP24.29■■□□□ 1.48
CD55-201ENST00000314754 NLRP6P59044 892 aa24.29■■□□□ 1.48
CD55-201ENST00000314754 NUTM2GQ5VZR2 741 aa24.29■■□□□ 1.48
CD55-201ENST00000314754 ZBTB47Q9UFB7 747 aaPredicted RBP24.29■■□□□ 1.48
CD55-201ENST00000314754 TMEM57Q8N5G2 664 aa24.28■■□□□ 1.48
CD55-201ENST00000314754 KIF24Q5T7B8 1368 aa24.27■■□□□ 1.48
CD55-201ENST00000314754 ELL2O00472 640 aaPredicted RBP24.27■■□□□ 1.48
CD55-201ENST00000314754 AMPHP49418 695 aa24.27■■□□□ 1.48
CD55-201ENST00000314754 ARHGAP45Q92619 1136 aa24.27■■□□□ 1.48
CD55-201ENST00000314754 TWISTNBQ3B726 338 aaPredicted RBP24.26■■□□□ 1.47
CD55-201ENST00000314754 KDRP35968 1356 aa24.26■■□□□ 1.47
CD55-201ENST00000314754 MRPL50Q8N5N7 158 aaKnown RBP24.26■■□□□ 1.47
CD55-201ENST00000314754 ADGRL3Q9HAR2 1447 aa24.26■■□□□ 1.47
CD55-201ENST00000314754 HDAC1Q13547 482 aaPredicted RBP24.25■■□□□ 1.47
CD55-201ENST00000314754 ZBTB40Q9NUA8 1239 aa24.25■■□□□ 1.47
CD55-201ENST00000314754 NPHP4O75161 1426 aaPredicted RBP24.24■■□□□ 1.47
CD55-201ENST00000314754 PHF8Q9UPP1 1060 aa24.24■■□□□ 1.47
CD55-201ENST00000314754 IGSF1Q8N6C5 1336 aa24.23■■□□□ 1.47
CD55-201ENST00000314754 C8orf58Q8NAV2 365 aa24.23■■□□□ 1.47
CD55-201ENST00000314754 ABTB2Q8N961 1025 aa24.23■■□□□ 1.47
CD55-201ENST00000314754 PDZRN3Q9UPQ7 1066 aa24.22■■□□□ 1.47
CD55-201ENST00000314754 MCM10Q7L590 875 aa24.22■■□□□ 1.47
CD55-201ENST00000314754 CHL1O00533 1208 aa24.2■■□□□ 1.47
CD55-201ENST00000314754 EYA1Q99502 592 aa24.2■■□□□ 1.46
CD55-201ENST00000314754 LTN1O94822 1766 aa24.2■■□□□ 1.46
CD55-201ENST00000314754 HAP1P54257 671 aaPredicted RBP24.19■■□□□ 1.46
CD55-201ENST00000314754 DDRGK1Q96HY6 314 aa24.19■■□□□ 1.46
CD55-201ENST00000314754 FOXO3O43524 673 aa24.18■■□□□ 1.46
CD55-201ENST00000314754 HOXC9P31274 260 aa24.18■■□□□ 1.46
CD55-201ENST00000314754 CHMP4BQ9H444 224 aaKnown RBP24.18■■□□□ 1.46
CD55-201ENST00000314754 KIAA0232Q92628 1395 aa24.17■■□□□ 1.46
CD55-201ENST00000314754 CRB1P82279 1406 aa24.17■■□□□ 1.46
CD55-201ENST00000314754 ABCC4O15439 1325 aa24.17■■□□□ 1.46
CD55-201ENST00000314754 KRT24Q2M2I5 525 aa24.16■■□□□ 1.46
CD55-201ENST00000314754 RTL1A6NKG5 1358 aa24.16■■□□□ 1.46
CD55-201ENST00000314754 NWD1Q149M9 1564 aa24.16■■□□□ 1.46
CD55-201ENST00000314754 MTHFSDQ2M296 383 aaKnown RBP24.16■■□□□ 1.46
CD55-201ENST00000314754 C14orf37Q86TY3 774 aa24.15■■□□□ 1.46
CD55-201ENST00000314754 GAS2L2Q8NHY3 880 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms