RNA–Protein interactions for RNA: ENST00000314124.11

TMEM40-202, Transcript of transmembrane protein 40, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TMEM40, Length 2,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-202ENST00000314124 MAP7D2Q96T17 732 aa19.51■□□□□ 0.71
TMEM40-202ENST00000314124 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
TMEM40-202ENST00000314124 CWC22Q9HCG8 908 aaKnown RBP19.5■□□□□ 0.71
TMEM40-202ENST00000314124 PNPLA6Q8IY17 1366 aa19.5■□□□□ 0.71
TMEM40-202ENST00000314124 CAMSAP1Q5T5Y3 1602 aa19.49■□□□□ 0.71
TMEM40-202ENST00000314124 VGFO15240 615 aaPredicted RBP19.49■□□□□ 0.71
TMEM40-202ENST00000314124 MCTP1Q6DN14 999 aa19.49■□□□□ 0.71
TMEM40-202ENST00000314124 TERF2IPQ9NYB0 399 aa19.49■□□□□ 0.71
TMEM40-202ENST00000314124 NOL7Q9UMY1 257 aaKnown RBP19.49■□□□□ 0.71
TMEM40-202ENST00000314124 ZFYVE9O95405 1425 aa19.48■□□□□ 0.71
TMEM40-202ENST00000314124 ZSCAN23Q3MJ62 389 aa19.48■□□□□ 0.71
TMEM40-202ENST00000314124 ATAD2Q6PL18 1390 aa19.48■□□□□ 0.71
TMEM40-202ENST00000314124 ZNF500O60304 480 aaPredicted RBP19.48■□□□□ 0.71
TMEM40-202ENST00000314124 CYP2E1P05181 493 aaPredicted RBP19.48■□□□□ 0.71
TMEM40-202ENST00000314124 MRPL50Q8N5N7 158 aaKnown RBP19.48■□□□□ 0.71
TMEM40-202ENST00000314124 CAVIN1Q6NZI2 390 aaKnown RBP19.47■□□□□ 0.71
TMEM40-202ENST00000314124 PDLIM2Q96JY6 352 aa19.47■□□□□ 0.71
TMEM40-202ENST00000314124 LMBRD1Q9NUN5 540 aa19.47■□□□□ 0.71
TMEM40-202ENST00000314124 LRRC7Q96NW7 1537 aa19.47■□□□□ 0.71
TMEM40-202ENST00000314124 FYB1O15117 783 aa19.47■□□□□ 0.71
TMEM40-202ENST00000314124 ABCC4O15439 1325 aa19.47■□□□□ 0.71
TMEM40-202ENST00000314124 KIF20BQ96Q89 1820 aa19.47■□□□□ 0.71
TMEM40-202ENST00000314124 NCLP19338 710 aaKnown RBP19.46■□□□□ 0.71
TMEM40-202ENST00000314124 C1orf115Q9H7X2 142 aa19.46■□□□□ 0.71
TMEM40-202ENST00000314124 VAMP4O75379 141 aa19.46■□□□□ 0.71
TMEM40-202ENST00000314124 SRPK2P78362 688 aaKnown RBP19.46■□□□□ 0.71
TMEM40-202ENST00000314124 PIK3C2BO00750 1634 aa19.45■□□□□ 0.7
TMEM40-202ENST00000314124 MCM5P33992 734 aa19.45■□□□□ 0.7
TMEM40-202ENST00000314124 SIRT2Q8IXJ6 389 aa19.45■□□□□ 0.7
TMEM40-202ENST00000314124 FAM135BQ49AJ0 1406 aa19.45■□□□□ 0.7
TMEM40-202ENST00000314124 CSPP1Q1MSJ5 1256 aa19.45■□□□□ 0.7
TMEM40-202ENST00000314124 KIF24Q5T7B8 1368 aa19.45■□□□□ 0.7
TMEM40-202ENST00000314124 NEXMIFQ5QGS0 1516 aa19.44■□□□□ 0.7
TMEM40-202ENST00000314124 HECW2Q9P2P5 1572 aa19.44■□□□□ 0.7
TMEM40-202ENST00000314124 CLTCQ00610 1675 aaKnown RBP19.44■□□□□ 0.7
TMEM40-202ENST00000314124 INTS3Q68E01 1043 aaKnown RBP19.43■□□□□ 0.7
TMEM40-202ENST00000314124 ST18O60284 1047 aa19.43■□□□□ 0.7
TMEM40-202ENST00000314124 GSPT1P15170 499 aaKnown RBP19.43■□□□□ 0.7
TMEM40-202ENST00000314124 GNAI1P63096 354 aa19.43■□□□□ 0.7
TMEM40-202ENST00000314124 PLEKHM2Q8IWE5 1019 aa19.43■□□□□ 0.7
TMEM40-202ENST00000314124 API5Q9BZZ5 524 aaKnown RBP19.43■□□□□ 0.7
TMEM40-202ENST00000314124 USP26Q9BXU7 913 aa19.42■□□□□ 0.7
TMEM40-202ENST00000314124 FRMPD1Q5SYB0 1578 aa19.42■□□□□ 0.7
TMEM40-202ENST00000314124 TTC22Q5TAA0 569 aa19.42■□□□□ 0.7
TMEM40-202ENST00000314124 CASC1Q6TDU7 716 aa19.42■□□□□ 0.7
TMEM40-202ENST00000314124 MTERF4Q7Z6M4 381 aaKnown RBP19.42■□□□□ 0.7
TMEM40-202ENST00000314124 RBSNQ9H1K0 784 aa19.42■□□□□ 0.7
TMEM40-202ENST00000314124 IFT57Q9NWB7 429 aa19.42■□□□□ 0.7
TMEM40-202ENST00000314124 R3HCC1Q9Y3T6 440 aaKnown RBP19.41■□□□□ 0.7
TMEM40-202ENST00000314124 PRKAR2BP31323 418 aa19.41■□□□□ 0.7
TMEM40-202ENST00000314124 NFE2L2Q16236 605 aa19.41■□□□□ 0.7
TMEM40-202ENST00000314124 ZKSCAN5Q9Y2L8 839 aa19.41■□□□□ 0.7
TMEM40-202ENST00000314124 HDGFL2Q7Z4V5 671 aaPredicted RBP19.4■□□□□ 0.7
TMEM40-202ENST00000314124 DCTPP1Q9H773 170 aa19.4■□□□□ 0.7
TMEM40-202ENST00000314124 CD163L1Q9NR16 1453 aa19.4■□□□□ 0.7
TMEM40-202ENST00000314124 PRIM1P49642 420 aaKnown RBP19.4■□□□□ 0.7
TMEM40-202ENST00000314124 SAFB2Q14151 953 aaKnown RBP eCLIP19.39■□□□□ 0.69
TMEM40-202ENST00000314124 LRSAM1Q6UWE0 723 aa19.39■□□□□ 0.69
TMEM40-202ENST00000314124 CCDC39Q9UFE4 941 aa19.39■□□□□ 0.69
TMEM40-202ENST00000314124 ABCC3O15438 1527 aa19.38■□□□□ 0.69
TMEM40-202ENST00000314124 ASXL2Q76L83 1435 aa19.38■□□□□ 0.69
TMEM40-202ENST00000314124 PRPF40AO75400 957 aaKnown RBP19.38■□□□□ 0.69
TMEM40-202ENST00000314124 KNDC1Q76NI1 1749 aa19.38■□□□□ 0.69
TMEM40-202ENST00000314124 YEATS2Q9ULM3 1422 aa19.38■□□□□ 0.69
TMEM40-202ENST00000314124 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.37■□□□□ 0.69
TMEM40-202ENST00000314124 DYNC1I1O14576 645 aa19.36■□□□□ 0.69
TMEM40-202ENST00000314124 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
TMEM40-202ENST00000314124 TSPYL6Q8N831 410 aa19.36■□□□□ 0.69
TMEM40-202ENST00000314124 MAP2P11137 1827 aaKnown RBP19.36■□□□□ 0.69
TMEM40-202ENST00000314124 SIGLEC1Q9BZZ2 1709 aa19.36■□□□□ 0.69
TMEM40-202ENST00000314124 REC8O95072 547 aa19.36■□□□□ 0.69
TMEM40-202ENST00000314124 MBD3O95983 291 aa19.36■□□□□ 0.69
TMEM40-202ENST00000314124 ZNF853P0CG23 659 aa19.36■□□□□ 0.69
TMEM40-202ENST00000314124 RBM10P98175 930 aaKnown RBP19.36■□□□□ 0.69
TMEM40-202ENST00000314124 GGT6Q6P531 493 aa19.36■□□□□ 0.69
TMEM40-202ENST00000314124 GPT2Q8TD30 523 aa19.36■□□□□ 0.69
TMEM40-202ENST00000314124 FAM13BQ9NYF5 915 aa19.36■□□□□ 0.69
TMEM40-202ENST00000314124 UQCRHLA0A096LP55 91 aa19.35■□□□□ 0.69
TMEM40-202ENST00000314124 UQCRHP07919 91 aa19.35■□□□□ 0.69
TMEM40-202ENST00000314124 PKP1Q13835 747 aa19.35■□□□□ 0.69
TMEM40-202ENST00000314124 XPCQ01831 940 aaPredicted RBP19.35■□□□□ 0.69
TMEM40-202ENST00000314124 LMOD3Q0VAK6 560 aa19.35■□□□□ 0.69
TMEM40-202ENST00000314124 PTPRMP28827 1452 aa19.35■□□□□ 0.69
TMEM40-202ENST00000314124 DLG5Q8TDM6 1919 aa19.35■□□□□ 0.69
TMEM40-202ENST00000314124 MBIPQ9NS73 344 aa19.34■□□□□ 0.69
TMEM40-202ENST00000314124 NUTM2DQ5VT03 806 aaPredicted RBP19.34■□□□□ 0.69
TMEM40-202ENST00000314124 MLH3Q9UHC1 1453 aa19.33■□□□□ 0.68
TMEM40-202ENST00000314124 RPAP2Q8IXW5 612 aaPredicted RBP19.33■□□□□ 0.68
TMEM40-202ENST00000314124 SASS6Q6UVJ0 657 aa19.32■□□□□ 0.68
TMEM40-202ENST00000314124 ZGPATQ8N5A5 531 aaKnown RBP19.32■□□□□ 0.68
TMEM40-202ENST00000314124 ANKRD44Q8N8A2 993 aa19.32■□□□□ 0.68
TMEM40-202ENST00000314124 STK26Q9P289 416 aa19.32■□□□□ 0.68
TMEM40-202ENST00000314124 ELL2O00472 640 aaPredicted RBP19.31■□□□□ 0.68
TMEM40-202ENST00000314124 TMEM63CQ9P1W3 806 aa19.31■□□□□ 0.68
TMEM40-202ENST00000314124 RBM27Q9P2N5 1060 aaKnown RBP19.31■□□□□ 0.68
TMEM40-202ENST00000314124 ZDHHC9Q9Y397 364 aa19.31■□□□□ 0.68
TMEM40-202ENST00000314124 SDSP20132 328 aa19.31■□□□□ 0.68
TMEM40-202ENST00000314124 PHACTR3Q96KR7 559 aa19.31■□□□□ 0.68
TMEM40-202ENST00000314124 SYCE3A1L190 88 aa19.3■□□□□ 0.68
TMEM40-202ENST00000314124 HAP1P54257 671 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms