RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 C22orf23Q9BZE7 217 aa12.16□□□□□ -0.46
LSMEM1-201ENST00000312849 C3P01024 1663 aa12.15□□□□□ -0.46
LSMEM1-201ENST00000312849 GCC1Q96CN9 775 aa12.15□□□□□ -0.46
LSMEM1-201ENST00000312849 EIF5BO60841 1220 aaKnown RBP12.14□□□□□ -0.47
LSMEM1-201ENST00000312849 VAMP4O75379 141 aa12.14□□□□□ -0.47
LSMEM1-201ENST00000312849 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
LSMEM1-201ENST00000312849 CYB5RLQ6IPT4 315 aa12.14□□□□□ -0.47
LSMEM1-201ENST00000312849 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
LSMEM1-201ENST00000312849 COG3Q96JB2 828 aa12.14□□□□□ -0.47
LSMEM1-201ENST00000312849 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
LSMEM1-201ENST00000312849 KIF24Q5T7B8 1368 aa12.14□□□□□ -0.47
LSMEM1-201ENST00000312849 NRKQ7Z2Y5 1582 aa12.14□□□□□ -0.47
LSMEM1-201ENST00000312849 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
LSMEM1-201ENST00000312849 CHD1LQ86WJ1 897 aa12.13□□□□□ -0.47
LSMEM1-201ENST00000312849 NUDT16Q96DE0 195 aaKnown RBP12.13□□□□□ -0.47
LSMEM1-201ENST00000312849 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
LSMEM1-201ENST00000312849 PHACTR3Q96KR7 559 aa12.12□□□□□ -0.47
LSMEM1-201ENST00000312849 API5Q9BZZ5 524 aaKnown RBP12.12□□□□□ -0.47
LSMEM1-201ENST00000312849 ABCC4O15439 1325 aa12.12□□□□□ -0.47
LSMEM1-201ENST00000312849 ZBTB7BO15156 539 aaPredicted RBP12.12□□□□□ -0.47
LSMEM1-201ENST00000312849 MFAP1P55081 439 aaKnown RBP12.12□□□□□ -0.47
LSMEM1-201ENST00000312849 CFAP44Q96MT7 982 aa12.12□□□□□ -0.47
LSMEM1-201ENST00000312849 SLKQ9H2G2 1235 aaPredicted RBP12.12□□□□□ -0.47
LSMEM1-201ENST00000312849 CHMP5Q9NZZ3 219 aa12.12□□□□□ -0.47
LSMEM1-201ENST00000312849 METP08581 1390 aa12.11□□□□□ -0.47
LSMEM1-201ENST00000312849 HMOX1P09601 288 aa12.11□□□□□ -0.47
LSMEM1-201ENST00000312849 RBM25P49756 843 aaKnown RBP12.11□□□□□ -0.47
LSMEM1-201ENST00000312849 BMP2KLQ5H9B9 411 aa12.11□□□□□ -0.47
LSMEM1-201ENST00000312849 NME9Q86XW9 330 aa12.11□□□□□ -0.47
LSMEM1-201ENST00000312849 ESF1Q9H501 851 aaKnown RBP12.11□□□□□ -0.47
LSMEM1-201ENST00000312849 EMILIN1Q9Y6C2 1016 aa12.11□□□□□ -0.47
LSMEM1-201ENST00000312849 HSCBQ8IWL3 235 aa12.1□□□□□ -0.47
LSMEM1-201ENST00000312849 MBIPQ9NS73 344 aa12.1□□□□□ -0.47
LSMEM1-201ENST00000312849 L1TD1Q5T7N2 865 aaKnown RBP12.1□□□□□ -0.47
LSMEM1-201ENST00000312849 IL27Q8NEV9 243 aa12.1□□□□□ -0.47
LSMEM1-201ENST00000312849 SNX21Q969T3 373 aa12.1□□□□□ -0.47
LSMEM1-201ENST00000312849 UBR1Q8IWV7 1749 aa12.09□□□□□ -0.47
LSMEM1-201ENST00000312849 TOPAZ1Q8N9V7 1692 aa12.09□□□□□ -0.47
LSMEM1-201ENST00000312849 TWISTNBQ3B726 338 aaPredicted RBP12.09□□□□□ -0.47
LSMEM1-201ENST00000312849 TXNDC2Q86VQ3 553 aa12.08□□□□□ -0.48
LSMEM1-201ENST00000312849 TNRQ92752 1358 aa12.08□□□□□ -0.48
LSMEM1-201ENST00000312849 NALCNQ8IZF0 1738 aa12.08□□□□□ -0.48
LSMEM1-201ENST00000312849 LNPKQ9C0E8 428 aa12.08□□□□□ -0.48
LSMEM1-201ENST00000312849 FBLN1P23142 703 aa12.07□□□□□ -0.48
LSMEM1-201ENST00000312849 ANKRD45Q5TZF3 282 aa12.07□□□□□ -0.48
LSMEM1-201ENST00000312849 TSPYL6Q8N831 410 aa12.07□□□□□ -0.48
LSMEM1-201ENST00000312849 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
LSMEM1-201ENST00000312849 MCM4P33991 863 aa12.06□□□□□ -0.48
LSMEM1-201ENST00000312849 THUMPD2Q9BTF0 503 aaKnown RBP12.06□□□□□ -0.48
LSMEM1-201ENST00000312849 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
LSMEM1-201ENST00000312849 MLECQ14165 292 aa12.06□□□□□ -0.48
LSMEM1-201ENST00000312849 BRPF3Q9ULD4 1205 aa12.06□□□□□ -0.48
LSMEM1-201ENST00000312849 KIAA0232Q92628 1395 aa12.06□□□□□ -0.48
LSMEM1-201ENST00000312849 TMEM2Q9UHN6 1383 aa12.06□□□□□ -0.48
LSMEM1-201ENST00000312849 RGPD1P0DJD0 1748 aa12.05□□□□□ -0.48
LSMEM1-201ENST00000312849 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
LSMEM1-201ENST00000312849 PLEKHG3A1L390 1219 aa12.05□□□□□ -0.48
LSMEM1-201ENST00000312849 INTS3Q68E01 1043 aaKnown RBP12.05□□□□□ -0.48
LSMEM1-201ENST00000312849 C8orf58Q8NAV2 365 aa12.05□□□□□ -0.48
LSMEM1-201ENST00000312849 ZRANB1Q9UGI0 708 aa12.05□□□□□ -0.48
LSMEM1-201ENST00000312849 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.04□□□□□ -0.48
LSMEM1-201ENST00000312849 OVOS2A0A0J9YW53 1432 aa12.04□□□□□ -0.48
LSMEM1-201ENST00000312849 OVOS2Q6IE36 1432 aa12.04□□□□□ -0.48
LSMEM1-201ENST00000312849 TTC21BQ7Z4L5 1316 aa12.04□□□□□ -0.48
LSMEM1-201ENST00000312849 DDX11L8A8MPP1 907 aa12.04□□□□□ -0.48
LSMEM1-201ENST00000312849 PTMSP20962 102 aa12.04□□□□□ -0.48
LSMEM1-201ENST00000312849 RRS1Q15050 365 aaKnown RBP12.04□□□□□ -0.48
LSMEM1-201ENST00000312849 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
LSMEM1-201ENST00000312849 FMN2Q9NZ56 1722 aa12.03□□□□□ -0.48
LSMEM1-201ENST00000312849 PLEKHG1Q9ULL1 1385 aa12.03□□□□□ -0.48
LSMEM1-201ENST00000312849 CHL1O00533 1208 aa12.03□□□□□ -0.48
LSMEM1-201ENST00000312849 PTPRCP08575 1304 aa12.03□□□□□ -0.48
LSMEM1-201ENST00000312849 USP31Q70CQ4 1352 aa12.02□□□□□ -0.48
LSMEM1-201ENST00000312849 CDC45O75419 566 aa12.02□□□□□ -0.48
LSMEM1-201ENST00000312849 EIF4A2Q14240 407 aaKnown RBP12.02□□□□□ -0.48
LSMEM1-201ENST00000312849 ADAMTS13Q76LX8 1427 aa12.02□□□□□ -0.48
LSMEM1-201ENST00000312849 SIRT2Q8IXJ6 389 aa12.02□□□□□ -0.48
LSMEM1-201ENST00000312849 DCTPP1Q9H773 170 aa12.02□□□□□ -0.48
LSMEM1-201ENST00000312849 ROBO2Q9HCK4 1378 aa12.02□□□□□ -0.49
LSMEM1-201ENST00000312849 USP6P35125 1406 aa12.02□□□□□ -0.49
LSMEM1-201ENST00000312849 ELL2O00472 640 aaPredicted RBP12.02□□□□□ -0.49
LSMEM1-201ENST00000312849 DDIT3P35638 169 aa12.02□□□□□ -0.49
LSMEM1-201ENST00000312849 RPAP2Q8IXW5 612 aaPredicted RBP12.02□□□□□ -0.49
LSMEM1-201ENST00000312849 TTC21AQ8NDW8 1320 aa12.01□□□□□ -0.49
LSMEM1-201ENST00000312849 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
LSMEM1-201ENST00000312849 FAM43AQ8N2R8 423 aa12.01□□□□□ -0.49
LSMEM1-201ENST00000312849 ANKRD44Q8N8A2 993 aa12.01□□□□□ -0.49
LSMEM1-201ENST00000312849 ARHGEF10O15013 1369 aa12.01□□□□□ -0.49
LSMEM1-201ENST00000312849 RIMS1Q86UR5 1692 aaKnown RBP12□□□□□ -0.49
LSMEM1-201ENST00000312849 PEAK1Q9H792 1746 aa12□□□□□ -0.49
LSMEM1-201ENST00000312849 SULT6B1Q6IMI4 303 aa12□□□□□ -0.49
LSMEM1-201ENST00000312849 TBC1D9Q6ZT07 1266 aa12□□□□□ -0.49
LSMEM1-201ENST00000312849 C1orf115Q9H7X2 142 aa12□□□□□ -0.49
LSMEM1-201ENST00000312849 ISY1Q9ULR0 285 aaKnown RBP12□□□□□ -0.49
LSMEM1-201ENST00000312849 ACEP12821 1306 aa12□□□□□ -0.49
LSMEM1-201ENST00000312849 FAM83GA6ND36 823 aa12□□□□□ -0.49
LSMEM1-201ENST00000312849 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
LSMEM1-201ENST00000312849 NCKAP5LQ9HCH0 1330 aa11.99□□□□□ -0.49
LSMEM1-201ENST00000312849 CACNA1FO60840 1977 aa11.99□□□□□ -0.49
LSMEM1-201ENST00000312849 GOLGA6L3A6NEY3 463 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms