RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 UPF3BQ9BZI7 483 aaKnown RBP16.17■□□□□ 0.18
CLCN6-201ENST00000312413 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
CLCN6-201ENST00000312413 MVPQ14764 893 aaKnown RBP16.17■□□□□ 0.18
CLCN6-201ENST00000312413 TRIM22Q8IYM9 498 aa16.17■□□□□ 0.18
CLCN6-201ENST00000312413 KIF2AO00139 706 aaPredicted RBP16.16■□□□□ 0.18
CLCN6-201ENST00000312413 FAM193AP78312 1265 aa16.16■□□□□ 0.18
CLCN6-201ENST00000312413 ZSCAN31Q96LW9 406 aaPredicted RBP16.16■□□□□ 0.18
CLCN6-201ENST00000312413 ENOX2Q16206 610 aaKnown RBP16.16■□□□□ 0.18
CLCN6-201ENST00000312413 TMCO3Q6UWJ1 677 aa16.16■□□□□ 0.18
CLCN6-201ENST00000312413 PRKCSHP14314 528 aaPredicted RBP16.16■□□□□ 0.18
CLCN6-201ENST00000312413 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
CLCN6-201ENST00000312413 TSR2Q969E8 191 aaKnown RBP16.16■□□□□ 0.18
CLCN6-201ENST00000312413 PDIA4P13667 645 aaKnown RBP16.16■□□□□ 0.18
CLCN6-201ENST00000312413 CCT4P50991 539 aaKnown RBP16.15■□□□□ 0.18
CLCN6-201ENST00000312413 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
CLCN6-201ENST00000312413 SLC3A2P08195 630 aaKnown RBP16.15■□□□□ 0.18
CLCN6-201ENST00000312413 RUSC2Q8N2Y8 1516 aa16.15■□□□□ 0.18
CLCN6-201ENST00000312413 TAX1BP1Q86VP1 789 aa16.15■□□□□ 0.18
CLCN6-201ENST00000312413 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
CLCN6-201ENST00000312413 SRCIN1Q9C0H9 1055 aa16.15■□□□□ 0.18
CLCN6-201ENST00000312413 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
CLCN6-201ENST00000312413 BLOC1S2Q6QNY1 142 aa16.15■□□□□ 0.18
CLCN6-201ENST00000312413 INCENPQ9NQS7 918 aa16.15■□□□□ 0.18
CLCN6-201ENST00000312413 SYCE3A1L190 88 aa16.15■□□□□ 0.18
CLCN6-201ENST00000312413 LRRFIP2Q9Y608 721 aaKnown RBP16.15■□□□□ 0.18
CLCN6-201ENST00000312413 SMTNL1A8MU46 457 aa16.14■□□□□ 0.17
CLCN6-201ENST00000312413 IKQ13123 557 aaPredicted RBP16.14■□□□□ 0.17
CLCN6-201ENST00000312413 GBP3Q9H0R5 595 aa16.14■□□□□ 0.17
CLCN6-201ENST00000312413 MAP3K11Q16584 847 aa16.14■□□□□ 0.17
CLCN6-201ENST00000312413 WDR63Q8IWG1 891 aa16.14■□□□□ 0.17
CLCN6-201ENST00000312413 KRI1Q8N9T8 703 aaKnown RBP16.14■□□□□ 0.17
CLCN6-201ENST00000312413 ANKRD62A6NC57 917 aa16.13■□□□□ 0.17
CLCN6-201ENST00000312413 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
CLCN6-201ENST00000312413 CCDC158Q5M9N0 1113 aa16.13■□□□□ 0.17
CLCN6-201ENST00000312413 PDRG1Q9NUG6 133 aa16.13■□□□□ 0.17
CLCN6-201ENST00000312413 ARHGAP29Q52LW3 1261 aa16.13■□□□□ 0.17
CLCN6-201ENST00000312413 TANGO6Q9C0B7 1094 aa16.13■□□□□ 0.17
CLCN6-201ENST00000312413 EPB41L2O43491 1005 aaKnown RBP16.12■□□□□ 0.17
CLCN6-201ENST00000312413 PTPN14Q15678 1187 aa16.12■□□□□ 0.17
CLCN6-201ENST00000312413 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.12■□□□□ 0.172e-6■■■■■ 28.9
CLCN6-201ENST00000312413 NLRP2Q9NX02 1062 aa16.12■□□□□ 0.17
CLCN6-201ENST00000312413 CRACR2AQ9BSW2 395 aa16.11■□□□□ 0.17
CLCN6-201ENST00000312413 PDCL3Q9H2J4 239 aa16.11■□□□□ 0.17
CLCN6-201ENST00000312413 SCAPERQ9BY12 1400 aa16.11■□□□□ 0.17
CLCN6-201ENST00000312413 CBX1P83916 185 aa16.11■□□□□ 0.17
CLCN6-201ENST00000312413 TTC39AQ5SRH9 613 aa16.11■□□□□ 0.17
CLCN6-201ENST00000312413 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
CLCN6-201ENST00000312413 JAKMIP1Q96N16 626 aaKnown RBP16.1■□□□□ 0.17
CLCN6-201ENST00000312413 NOL7Q9UMY1 257 aaKnown RBP16.1■□□□□ 0.17
CLCN6-201ENST00000312413 EZRP15311 586 aaKnown RBP16.1■□□□□ 0.17
CLCN6-201ENST00000312413 PTPRGP23470 1445 aa16.1■□□□□ 0.17
CLCN6-201ENST00000312413 ANKRD50Q9ULJ7 1429 aa16.1■□□□□ 0.17
CLCN6-201ENST00000312413 CDKL5O76039 1030 aa16.1■□□□□ 0.17
CLCN6-201ENST00000312413 SFPQP23246 707 aaKnown RBP eCLIP16.1■□□□□ 0.17
CLCN6-201ENST00000312413 NLRP6P59044 892 aa16.1■□□□□ 0.17
CLCN6-201ENST00000312413 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
CLCN6-201ENST00000312413 CFAP100Q494V2 611 aa16.1■□□□□ 0.17
CLCN6-201ENST00000312413 KIF18AQ8NI77 898 aa16.1■□□□□ 0.17
CLCN6-201ENST00000312413 HDGFL1Q5TGJ6 251 aa16.09■□□□□ 0.17
CLCN6-201ENST00000312413 CUX1P39880 1505 aa16.09■□□□□ 0.17
CLCN6-201ENST00000312413 TMEM132EQ6IEE7 984 aa16.09■□□□□ 0.17
CLCN6-201ENST00000312413 CCDC148Q8NFR7 591 aa16.09■□□□□ 0.17
CLCN6-201ENST00000312413 NACAP1Q9BZK3 213 aa16.09■□□□□ 0.17
CLCN6-201ENST00000312413 SHTN1A0MZ66 631 aa16.09■□□□□ 0.17
CLCN6-201ENST00000312413 CCDC69A6NI79 296 aa16.09■□□□□ 0.17
CLCN6-201ENST00000312413 GIMAP7Q8NHV1 300 aa16.09■□□□□ 0.17
CLCN6-201ENST00000312413 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
CLCN6-201ENST00000312413 KRT32Q14532 448 aa16.09■□□□□ 0.17
CLCN6-201ENST00000312413 MAP4K4O95819 1239 aaPredicted RBP16.08■□□□□ 0.17
CLCN6-201ENST00000312413 DHX37Q8IY37 1157 aaKnown RBP16.08■□□□□ 0.17
CLCN6-201ENST00000312413 ZSCAN12O43309 604 aa16.08■□□□□ 0.16
CLCN6-201ENST00000312413 KIAA1328Q86T90 577 aa16.08■□□□□ 0.16
CLCN6-201ENST00000312413 STK11IPQ8N1F8 1099 aa16.08■□□□□ 0.16
CLCN6-201ENST00000312413 ZNF644Q9H582 1327 aaPredicted RBP16.08■□□□□ 0.16
CLCN6-201ENST00000312413 CALCOCO1Q9P1Z2 691 aa16.08■□□□□ 0.16
CLCN6-201ENST00000312413 TAF4BQ92750 862 aa16.08■□□□□ 0.16
CLCN6-201ENST00000312413 ZHX3Q9H4I2 956 aa16.07■□□□□ 0.16
CLCN6-201ENST00000312413 PLEKHO1Q53GL0 409 aaPredicted RBP16.07■□□□□ 0.16
CLCN6-201ENST00000312413 DYDC1Q8WWB3 177 aa16.07■□□□□ 0.16
CLCN6-201ENST00000312413 EIF5P55010 431 aaKnown RBP16.06■□□□□ 0.16
CLCN6-201ENST00000312413 CGNQ9P2M7 1197 aaKnown RBP16.06■□□□□ 0.16
CLCN6-201ENST00000312413 XPCQ01831 940 aaPredicted RBP16.06■□□□□ 0.16
CLCN6-201ENST00000312413 TMEM132AQ24JP5 1023 aa16.06■□□□□ 0.16
CLCN6-201ENST00000312413 RPAP2Q8IXW5 612 aaPredicted RBP16.06■□□□□ 0.16
CLCN6-201ENST00000312413 CCDC183Q5T5S1 534 aa16.06■□□□□ 0.16
CLCN6-201ENST00000312413 CWC27Q6UX04 472 aaKnown RBP16.06■□□□□ 0.16
CLCN6-201ENST00000312413 SIL1Q9H173 461 aa16.05■□□□□ 0.16
CLCN6-201ENST00000312413 CNNM1Q9NRU3 951 aa16.05■□□□□ 0.16
CLCN6-201ENST00000312413 MAP9Q49MG5 647 aa16.05■□□□□ 0.16
CLCN6-201ENST00000312413 CFAP70Q5T0N1 1121 aa16.05■□□□□ 0.16
CLCN6-201ENST00000312413 NUTM2GQ5VZR2 741 aa16.05■□□□□ 0.16
CLCN6-201ENST00000312413 CAMK4Q16566 473 aa16.05■□□□□ 0.16
CLCN6-201ENST00000312413 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
CLCN6-201ENST00000312413 CTNNA3Q9UI47 895 aa16.05■□□□□ 0.16
CLCN6-201ENST00000312413 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
CLCN6-201ENST00000312413 BMP2KQ9NSY1 1161 aaPredicted RBP16.05■□□□□ 0.16
CLCN6-201ENST00000312413 GNL3LQ9NVN8 582 aaKnown RBP16.05■□□□□ 0.16
CLCN6-201ENST00000312413 URI1O94763 535 aaPredicted RBP16.04■□□□□ 0.16
CLCN6-201ENST00000312413 AACSQ86V21 672 aa16.04■□□□□ 0.16
CLCN6-201ENST00000312413 ZNF428Q96B54 188 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms