RNA–Protein interactions for RNA: ENST00000310522.5

TRPV1-201, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPV1, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-201ENST00000310522 PRKCSHP14314 528 aaPredicted RBP17.54■□□□□ 0.4
TRPV1-201ENST00000310522 STRCQ7RTU9 1775 aa17.54■□□□□ 0.4
TRPV1-201ENST00000310522 TSR2Q969E8 191 aaKnown RBP17.53■□□□□ 0.4
TRPV1-201ENST00000310522 CRBNQ96SW2 442 aa17.53■□□□□ 0.4
TRPV1-201ENST00000310522 RGPD1P0DJD0 1748 aa17.53■□□□□ 0.4
TRPV1-201ENST00000310522 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
TRPV1-201ENST00000310522 SBNO1A3KN83 1393 aa17.52■□□□□ 0.39
TRPV1-201ENST00000310522 FOXO3O43524 673 aa17.52■□□□□ 0.39
TRPV1-201ENST00000310522 PSME1Q06323 249 aa17.52■□□□□ 0.39
TRPV1-201ENST00000310522 C1orf167Q5SNV9 1468 aa17.52■□□□□ 0.39
TRPV1-201ENST00000310522 NFE2L2Q16236 605 aa17.51■□□□□ 0.39
TRPV1-201ENST00000310522 SULT6B1Q6IMI4 303 aa17.51■□□□□ 0.39
TRPV1-201ENST00000310522 C19orf44Q9H6X5 657 aa17.51■□□□□ 0.39
TRPV1-201ENST00000310522 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
TRPV1-201ENST00000310522 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
TRPV1-201ENST00000310522 DLG5Q8TDM6 1919 aa17.5■□□□□ 0.39
TRPV1-201ENST00000310522 FLT4P35916 1363 aa17.5■□□□□ 0.39
TRPV1-201ENST00000310522 AMPHP49418 695 aa17.49■□□□□ 0.39
TRPV1-201ENST00000310522 CCDC136Q96JN2 1154 aa17.49■□□□□ 0.39
TRPV1-201ENST00000310522 PLEKHG5O94827 1062 aa17.48■□□□□ 0.39
TRPV1-201ENST00000310522 MYH16Q9H6N6 1097 aa17.48■□□□□ 0.39
TRPV1-201ENST00000310522 MST1RQ04912 1400 aa17.48■□□□□ 0.39
TRPV1-201ENST00000310522 TRPM3Q9HCF6 1732 aaPredicted RBP17.47■□□□□ 0.39
TRPV1-201ENST00000310522 NFAT5O94916 1531 aa17.47■□□□□ 0.39
TRPV1-201ENST00000310522 XIRP1Q702N8 1843 aaKnown RBP17.47■□□□□ 0.39
TRPV1-201ENST00000310522 NEFMP07197 916 aa17.47■□□□□ 0.39
TRPV1-201ENST00000310522 HOXC9P31274 260 aa17.47■□□□□ 0.39
TRPV1-201ENST00000310522 TSHZ2Q9NRE2 1034 aa17.47■□□□□ 0.39
TRPV1-201ENST00000310522 LTN1O94822 1766 aa17.47■□□□□ 0.39
TRPV1-201ENST00000310522 RARSP54136 660 aaKnown RBP17.46■□□□□ 0.39
TRPV1-201ENST00000310522 DDX17Q92841 729 aaKnown RBP17.46■□□□□ 0.39
TRPV1-201ENST00000310522 BCL2L13Q9BXK5 485 aa17.46■□□□□ 0.39
TRPV1-201ENST00000310522 FAM83GA6ND36 823 aa17.46■□□□□ 0.38
TRPV1-201ENST00000310522 EXOSC9Q06265 439 aaKnown RBP17.46■□□□□ 0.38
TRPV1-201ENST00000310522 IL16Q14005 1332 aa17.45■□□□□ 0.38
TRPV1-201ENST00000310522 KIF1AQ12756 1690 aa17.45■□□□□ 0.38
TRPV1-201ENST00000310522 ARHGEF10O15013 1369 aa17.45■□□□□ 0.38
TRPV1-201ENST00000310522 ATF3P18847 181 aa17.44■□□□□ 0.38
TRPV1-201ENST00000310522 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
TRPV1-201ENST00000310522 EYA1Q99502 592 aa17.44■□□□□ 0.38
TRPV1-201ENST00000310522 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
TRPV1-201ENST00000310522 KRT28Q7Z3Y7 464 aa17.44■□□□□ 0.38
TRPV1-201ENST00000310522 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
TRPV1-201ENST00000310522 TNNQ9UQP3 1299 aa17.43■□□□□ 0.38
TRPV1-201ENST00000310522 ZNF335Q9H4Z2 1342 aaPredicted RBP17.43■□□□□ 0.38
TRPV1-201ENST00000310522 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
TRPV1-201ENST00000310522 LAS1LQ9Y4W2 734 aaKnown RBP17.43■□□□□ 0.38
TRPV1-201ENST00000310522 ZBTB7CA1YPR0 619 aa17.42■□□□□ 0.38
TRPV1-201ENST00000310522 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
TRPV1-201ENST00000310522 IGSF1Q8N6C5 1336 aa17.42■□□□□ 0.38
TRPV1-201ENST00000310522 DCCP43146 1447 aa17.41■□□□□ 0.38
TRPV1-201ENST00000310522 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
TRPV1-201ENST00000310522 FRAT1Q92837 279 aaPredicted RBP17.41■□□□□ 0.38
TRPV1-201ENST00000310522 SLIT3O75094 1523 aa17.4■□□□□ 0.38
TRPV1-201ENST00000310522 KDRP35968 1356 aa17.4■□□□□ 0.38
TRPV1-201ENST00000310522 KIF24Q5T7B8 1368 aa17.4■□□□□ 0.38
TRPV1-201ENST00000310522 PANK1Q8TE04 598 aa17.39■□□□□ 0.38
TRPV1-201ENST00000310522 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
TRPV1-201ENST00000310522 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
TRPV1-201ENST00000310522 RTL1A6NKG5 1358 aa17.38■□□□□ 0.37
TRPV1-201ENST00000310522 MSH6P52701 1360 aa17.38■□□□□ 0.37
TRPV1-201ENST00000310522 GCP02774 474 aa17.37■□□□□ 0.37
TRPV1-201ENST00000310522 ZNF853P0CG23 659 aa17.37■□□□□ 0.37
TRPV1-201ENST00000310522 CANXP27824 592 aaKnown RBP17.37■□□□□ 0.37
TRPV1-201ENST00000310522 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
TRPV1-201ENST00000310522 MCM10Q7L590 875 aa17.37■□□□□ 0.37
TRPV1-201ENST00000310522 IP6K1Q92551 441 aa17.37■□□□□ 0.37
TRPV1-201ENST00000310522 USP19O94966 1318 aa17.37■□□□□ 0.37
TRPV1-201ENST00000310522 CADPS2Q86UW7 1296 aa17.37■□□□□ 0.37
TRPV1-201ENST00000310522 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
TRPV1-201ENST00000310522 RGPD2P0DJD1 1756 aa17.36■□□□□ 0.37
TRPV1-201ENST00000310522 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
TRPV1-201ENST00000310522 RLBP1P12271 317 aa17.36■□□□□ 0.37
TRPV1-201ENST00000310522 SSH1Q8WYL5 1049 aa17.36■□□□□ 0.37
TRPV1-201ENST00000310522 LMOD3Q0VAK6 560 aa17.36■□□□□ 0.37
TRPV1-201ENST00000310522 KCNH5Q8NCM2 988 aa17.36■□□□□ 0.37
TRPV1-201ENST00000310522 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
TRPV1-201ENST00000310522 PHRF1Q9P1Y6 1649 aaKnown RBP17.35■□□□□ 0.37
TRPV1-201ENST00000310522 TSPYL6Q8N831 410 aa17.35■□□□□ 0.37
TRPV1-201ENST00000310522 COG6Q9Y2V7 657 aa17.35■□□□□ 0.37
TRPV1-201ENST00000310522 GNAI1P63096 354 aa17.34■□□□□ 0.37
TRPV1-201ENST00000310522 ARHGEF25Q86VW2 580 aa17.34■□□□□ 0.37
TRPV1-201ENST00000310522 SMC4Q9NTJ3 1288 aa17.34■□□□□ 0.37
TRPV1-201ENST00000310522 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.37
TRPV1-201ENST00000310522 PDE3AQ14432 1141 aa17.33■□□□□ 0.37
TRPV1-201ENST00000310522 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
TRPV1-201ENST00000310522 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.36
TRPV1-201ENST00000310522 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.36
TRPV1-201ENST00000310522 CLUAP1Q96AJ1 413 aa17.33■□□□□ 0.36
TRPV1-201ENST00000310522 NBPF4Q96M43 638 aa17.33■□□□□ 0.36
TRPV1-201ENST00000310522 PXDNQ92626 1479 aa17.33■□□□□ 0.36
TRPV1-201ENST00000310522 CFAP44Q96MT7 982 aa17.32■□□□□ 0.36
TRPV1-201ENST00000310522 ELL2O00472 640 aaPredicted RBP17.32■□□□□ 0.36
TRPV1-201ENST00000310522 BRINP3Q76B58 766 aa17.31■□□□□ 0.36
TRPV1-201ENST00000310522 SKAP1Q86WV1 359 aa17.31■□□□□ 0.36
TRPV1-201ENST00000310522 C8orf58Q8NAV2 365 aa17.31■□□□□ 0.36
TRPV1-201ENST00000310522 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
TRPV1-201ENST00000310522 CRB1P82279 1406 aa17.31■□□□□ 0.36
TRPV1-201ENST00000310522 CABLES1Q8TDN4 633 aa17.31■□□□□ 0.36
TRPV1-201ENST00000310522 RGPD5Q99666 1765 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms