RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 RAPGEF3O95398 923 aa16.71■□□□□ 0.27
CCDC13-201ENST00000310232 NEURL4Q96JN8 1562 aa16.7■□□□□ 0.26
CCDC13-201ENST00000310232 KIAA1211Q6ZU35 1233 aa16.7■□□□□ 0.26
CCDC13-201ENST00000310232 CD163L1Q9NR16 1453 aa16.69■□□□□ 0.26
CCDC13-201ENST00000310232 POLKQ9UBT6 870 aa16.69■□□□□ 0.26
CCDC13-201ENST00000310232 CIZ1Q9ULV3 898 aaPredicted RBP16.69■□□□□ 0.26
CCDC13-201ENST00000310232 NSD2O96028 1365 aa16.69■□□□□ 0.26
CCDC13-201ENST00000310232 UHRF1BP1LA0JNW5 1464 aa16.68■□□□□ 0.26
CCDC13-201ENST00000310232 VGFO15240 615 aaPredicted RBP16.68■□□□□ 0.26
CCDC13-201ENST00000310232 PLEKHM2Q8IWE5 1019 aa16.68■□□□□ 0.26
CCDC13-201ENST00000310232 ALDH1L2Q3SY69 923 aa16.68■□□□□ 0.26
CCDC13-201ENST00000310232 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
CCDC13-201ENST00000310232 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
CCDC13-201ENST00000310232 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
CCDC13-201ENST00000310232 PKNOX2Q96KN3 472 aa16.68■□□□□ 0.26
CCDC13-201ENST00000310232 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
CCDC13-201ENST00000310232 IL16Q14005 1332 aa16.68■□□□□ 0.26
CCDC13-201ENST00000310232 NCKAP5LQ9HCH0 1330 aa16.68■□□□□ 0.26
CCDC13-201ENST00000310232 TWISTNBQ3B726 338 aaPredicted RBP16.67■□□□□ 0.26
CCDC13-201ENST00000310232 WAPLQ7Z5K2 1190 aa16.67■□□□□ 0.26
CCDC13-201ENST00000310232 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
CCDC13-201ENST00000310232 TSHZ3Q63HK5 1081 aa16.67■□□□□ 0.26
CCDC13-201ENST00000310232 MPNDQ8N594 471 aa16.67■□□□□ 0.26
CCDC13-201ENST00000310232 CDC45O75419 566 aa16.66■□□□□ 0.26
CCDC13-201ENST00000310232 RRS1Q15050 365 aaKnown RBP16.66■□□□□ 0.26
CCDC13-201ENST00000310232 NOL8Q76FK4 1167 aaKnown RBP16.66■□□□□ 0.26
CCDC13-201ENST00000310232 GCC1Q96CN9 775 aa16.66■□□□□ 0.26
CCDC13-201ENST00000310232 RBSNQ9H1K0 784 aa16.66■□□□□ 0.26
CCDC13-201ENST00000310232 TERF2IPQ9NYB0 399 aa16.66■□□□□ 0.26
CCDC13-201ENST00000310232 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
CCDC13-201ENST00000310232 PRPF40AO75400 957 aaKnown RBP16.66■□□□□ 0.26
CCDC13-201ENST00000310232 KNDC1Q76NI1 1749 aa16.66■□□□□ 0.26
CCDC13-201ENST00000310232 FRMPD1Q5SYB0 1578 aa16.66■□□□□ 0.26
CCDC13-201ENST00000310232 ASXL2Q76L83 1435 aa16.65■□□□□ 0.26
CCDC13-201ENST00000310232 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
CCDC13-201ENST00000310232 MED14O60244 1454 aa16.65■□□□□ 0.26
CCDC13-201ENST00000310232 RRP9O43818 475 aaKnown RBP16.65■□□□□ 0.26
CCDC13-201ENST00000310232 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
CCDC13-201ENST00000310232 SKOR2Q2VWA4 1001 aaPredicted RBP16.65■□□□□ 0.26
CCDC13-201ENST00000310232 ZSCAN23Q3MJ62 389 aa16.65■□□□□ 0.26
CCDC13-201ENST00000310232 ARAP3Q8WWN8 1544 aa16.64■□□□□ 0.25
CCDC13-201ENST00000310232 NEXMIFQ5QGS0 1516 aa16.64■□□□□ 0.25
CCDC13-201ENST00000310232 FCHSD2O94868 740 aa16.64■□□□□ 0.25
CCDC13-201ENST00000310232 NFE2L2Q16236 605 aa16.64■□□□□ 0.25
CCDC13-201ENST00000310232 KLHL40Q2TBA0 621 aa16.64■□□□□ 0.25
CCDC13-201ENST00000310232 MAP2P11137 1827 aaKnown RBP16.64■□□□□ 0.25
CCDC13-201ENST00000310232 NME9Q86XW9 330 aa16.63■□□□□ 0.25
CCDC13-201ENST00000310232 LMBRD1Q9NUN5 540 aa16.63■□□□□ 0.25
CCDC13-201ENST00000310232 GOLGA6L22H0YM25 854 aa16.63■□□□□ 0.25
CCDC13-201ENST00000310232 RNF214Q8ND24 703 aa16.63■□□□□ 0.25
CCDC13-201ENST00000310232 GPT2Q8TD30 523 aa16.63■□□□□ 0.25
CCDC13-201ENST00000310232 FBXO31Q5XUX0 539 aaPredicted RBP16.63■□□□□ 0.25
CCDC13-201ENST00000310232 R3HCC1Q9Y3T6 440 aaKnown RBP16.63■□□□□ 0.25
CCDC13-201ENST00000310232 ABCC4O15439 1325 aa16.62■□□□□ 0.25
CCDC13-201ENST00000310232 CCDC173Q0VFZ6 552 aa16.62■□□□□ 0.25
CCDC13-201ENST00000310232 HDGFL2Q7Z4V5 671 aaPredicted RBP16.62■□□□□ 0.25
CCDC13-201ENST00000310232 USP26Q9BXU7 913 aa16.62■□□□□ 0.25
CCDC13-201ENST00000310232 ZDHHC9Q9Y397 364 aa16.62■□□□□ 0.25
CCDC13-201ENST00000310232 FAM135BQ49AJ0 1406 aa16.62■□□□□ 0.25
CCDC13-201ENST00000310232 DTNBO60941 627 aa16.62■□□□□ 0.25
CCDC13-201ENST00000310232 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
CCDC13-201ENST00000310232 SDSP20132 328 aa16.61■□□□□ 0.25
CCDC13-201ENST00000310232 ZSCAN30Q86W11 494 aa16.61■□□□□ 0.25
CCDC13-201ENST00000310232 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
CCDC13-201ENST00000310232 GLIPR1L2Q4G1C9 344 aa16.61■□□□□ 0.25
CCDC13-201ENST00000310232 TTC22Q5TAA0 569 aa16.61■□□□□ 0.25
CCDC13-201ENST00000310232 PPP1R9BQ96SB3 815 aa16.61■□□□□ 0.25
CCDC13-201ENST00000310232 LMTK2Q8IWU2 1503 aa16.61■□□□□ 0.25
CCDC13-201ENST00000310232 RPGRIP1LQ68CZ1 1315 aa16.61■□□□□ 0.25
CCDC13-201ENST00000310232 ABCC3O15438 1527 aa16.6■□□□□ 0.25
CCDC13-201ENST00000310232 MSNP26038 577 aaKnown RBP16.6■□□□□ 0.25
CCDC13-201ENST00000310232 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
CCDC13-201ENST00000310232 ISY1Q9ULR0 285 aaKnown RBP16.6■□□□□ 0.25
CCDC13-201ENST00000310232 PNPLA6Q8IY17 1366 aa16.6■□□□□ 0.25
CCDC13-201ENST00000310232 SYCE3A1L190 88 aa16.6■□□□□ 0.25
CCDC13-201ENST00000310232 AEBP1Q8IUX7 1158 aa16.6■□□□□ 0.25
CCDC13-201ENST00000310232 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.59■□□□□ 0.25
CCDC13-201ENST00000310232 PTPRMP28827 1452 aa16.59■□□□□ 0.25
CCDC13-201ENST00000310232 DLG5Q8TDM6 1919 aa16.59■□□□□ 0.25
CCDC13-201ENST00000310232 PTCH1Q13635 1447 aa16.59■□□□□ 0.25
CCDC13-201ENST00000310232 MEIS3Q99687 375 aa16.59■□□□□ 0.25
CCDC13-201ENST00000310232 TMEM63CQ9P1W3 806 aa16.59■□□□□ 0.25
CCDC13-201ENST00000310232 YTHDC2Q9H6S0 1430 aaKnown RBP16.59■□□□□ 0.25
CCDC13-201ENST00000310232 SOX12O15370 315 aa16.59■□□□□ 0.25
CCDC13-201ENST00000310232 JARID2Q92833 1246 aaPredicted RBP16.59■□□□□ 0.25
CCDC13-201ENST00000310232 FAM13BQ9NYF5 915 aa16.59■□□□□ 0.25
CCDC13-201ENST00000310232 GNAI1P63096 354 aa16.58■□□□□ 0.24
CCDC13-201ENST00000310232 MCM10Q7L590 875 aa16.58■□□□□ 0.24
CCDC13-201ENST00000310232 ANP32BQ92688 251 aaKnown RBP16.58■□□□□ 0.24
CCDC13-201ENST00000310232 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
CCDC13-201ENST00000310232 RABEP1Q15276 862 aa16.57■□□□□ 0.24
CCDC13-201ENST00000310232 DCTPP1Q9H773 170 aa16.57■□□□□ 0.24
CCDC13-201ENST00000310232 CYP2E1P05181 493 aaPredicted RBP16.56■□□□□ 0.24
CCDC13-201ENST00000310232 HECW2Q9P2P5 1572 aa16.56■□□□□ 0.24
CCDC13-201ENST00000310232 F6X3S4 739 aa16.56■□□□□ 0.24
CCDC13-201ENST00000310232 ZNF853P0CG23 659 aa16.56■□□□□ 0.24
CCDC13-201ENST00000310232 IL13P35225 146 aa16.56■□□□□ 0.24
CCDC13-201ENST00000310232 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
CCDC13-201ENST00000310232 PIK3C2BO00750 1634 aa16.56■□□□□ 0.24
CCDC13-201ENST00000310232 PUS7Q96PZ0 661 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms