RNA–Protein interactions for RNA: ENST00000310018.6

ATP6V0A4-201, Transcript of ATPase H+ transporting V0 subunit a4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V0A4, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4-201ENST00000310018 XRN1Q8IZH2 1706 aaKnown RBP18.46■□□□□ 0.55
ATP6V0A4-201ENST00000310018 PDE3BQ13370 1112 aa18.46■□□□□ 0.55
ATP6V0A4-201ENST00000310018 UPF2Q9HAU5 1272 aaKnown RBP18.46■□□□□ 0.55
ATP6V0A4-201ENST00000310018 CPSF1Q10570 1443 aaKnown RBP18.45■□□□□ 0.54
ATP6V0A4-201ENST00000310018 UQCRHLA0A096LP55 91 aa18.44■□□□□ 0.54
ATP6V0A4-201ENST00000310018 UQCRHP07919 91 aa18.44■□□□□ 0.54
ATP6V0A4-201ENST00000310018 FBLN1P23142 703 aa18.44■□□□□ 0.54
ATP6V0A4-201ENST00000310018 CDC42BPGQ6DT37 1551 aa18.44■□□□□ 0.54
ATP6V0A4-201ENST00000310018 KCNA6P17658 529 aa18.44■□□□□ 0.54
ATP6V0A4-201ENST00000310018 CCDC61Q9Y6R9 512 aa18.43■□□□□ 0.54
ATP6V0A4-201ENST00000310018 AKAP12Q02952 1782 aa18.43■□□□□ 0.54
ATP6V0A4-201ENST00000310018 PTCH1Q13635 1447 aa18.43■□□□□ 0.54
ATP6V0A4-201ENST00000310018 TOPAZ1Q8N9V7 1692 aa18.43■□□□□ 0.54
ATP6V0A4-201ENST00000310018 ITSN1Q15811 1721 aa18.43■□□□□ 0.54
ATP6V0A4-201ENST00000310018 MON2Q7Z3U7 1717 aa18.43■□□□□ 0.54
ATP6V0A4-201ENST00000310018 ANKLE2Q86XL3 938 aa18.43■□□□□ 0.54
ATP6V0A4-201ENST00000310018 ANP32BQ92688 251 aaKnown RBP18.43■□□□□ 0.54
ATP6V0A4-201ENST00000310018 ZRANB1Q9UGI0 708 aa18.43■□□□□ 0.54
ATP6V0A4-201ENST00000310018 RGPD8O14715 1765 aaPredicted RBP18.42■□□□□ 0.54
ATP6V0A4-201ENST00000310018 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
ATP6V0A4-201ENST00000310018 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
ATP6V0A4-201ENST00000310018 IGHDP01880 384 aa18.41■□□□□ 0.54
ATP6V0A4-201ENST00000310018 NME9Q86XW9 330 aa18.4■□□□□ 0.54
ATP6V0A4-201ENST00000310018 SMAP1Q8IYB5 467 aaPredicted RBP18.4■□□□□ 0.54
ATP6V0A4-201ENST00000310018 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
ATP6V0A4-201ENST00000310018 APAF1O14727 1248 aa18.39■□□□□ 0.53
ATP6V0A4-201ENST00000310018 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.39■□□□□ 0.53
ATP6V0A4-201ENST00000310018 CHD2O14647 1828 aaKnown RBP18.39■□□□□ 0.53
ATP6V0A4-201ENST00000310018 OFD1O75665 1012 aa18.39■□□□□ 0.53
ATP6V0A4-201ENST00000310018 PAXIP1Q6ZW49 1069 aaPredicted RBP18.38■□□□□ 0.53
ATP6V0A4-201ENST00000310018 FOXD4L1Q9NU39 408 aa18.38■□□□□ 0.53
ATP6V0A4-201ENST00000310018 EDC4Q6P2E9 1401 aaKnown RBP18.38■□□□□ 0.53
ATP6V0A4-201ENST00000310018 ZSCAN30Q86W11 494 aa18.38■□□□□ 0.53
ATP6V0A4-201ENST00000310018 CHMP5Q9NZZ3 219 aa18.37■□□□□ 0.53
ATP6V0A4-201ENST00000310018 COL3A1P02461 1466 aaPredicted RBP18.36■□□□□ 0.53
ATP6V0A4-201ENST00000310018 MAP2P11137 1827 aaKnown RBP18.36■□□□□ 0.53
ATP6V0A4-201ENST00000310018 IGSF3O75054 1194 aa18.36■□□□□ 0.53
ATP6V0A4-201ENST00000310018 MAP7D2Q96T17 732 aa18.36■□□□□ 0.53
ATP6V0A4-201ENST00000310018 ACEP12821 1306 aa18.36■□□□□ 0.53
ATP6V0A4-201ENST00000310018 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
ATP6V0A4-201ENST00000310018 CBX1P83916 185 aa18.35■□□□□ 0.53
ATP6V0A4-201ENST00000310018 JARID2Q92833 1246 aaPredicted RBP18.35■□□□□ 0.53
ATP6V0A4-201ENST00000310018 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
ATP6V0A4-201ENST00000310018 NRKQ7Z2Y5 1582 aa18.35■□□□□ 0.53
ATP6V0A4-201ENST00000310018 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
ATP6V0A4-201ENST00000310018 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.34■□□□□ 0.53
ATP6V0A4-201ENST00000310018 MFAP1P55081 439 aaKnown RBP18.34■□□□□ 0.53
ATP6V0A4-201ENST00000310018 PMFBP1Q8TBY8 1022 aa18.34■□□□□ 0.53
ATP6V0A4-201ENST00000310018 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
ATP6V0A4-201ENST00000310018 TSC1Q92574 1164 aa18.34■□□□□ 0.53
ATP6V0A4-201ENST00000310018 NALCNQ8IZF0 1738 aa18.34■□□□□ 0.53
ATP6V0A4-201ENST00000310018 NPHP4O75161 1426 aaPredicted RBP18.33■□□□□ 0.53
ATP6V0A4-201ENST00000310018 PPP4R3BQ5MIZ7 849 aa18.33■□□□□ 0.53
ATP6V0A4-201ENST00000310018 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
ATP6V0A4-201ENST00000310018 BCAR3O75815 825 aa18.32■□□□□ 0.52
ATP6V0A4-201ENST00000310018 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
ATP6V0A4-201ENST00000310018 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
ATP6V0A4-201ENST00000310018 PLEKHG3A1L390 1219 aa18.32■□□□□ 0.52
ATP6V0A4-201ENST00000310018 POLKQ9UBT6 870 aa18.32■□□□□ 0.52
ATP6V0A4-201ENST00000310018 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
ATP6V0A4-201ENST00000310018 ZBTB22O15209 634 aa18.31■□□□□ 0.52
ATP6V0A4-201ENST00000310018 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
ATP6V0A4-201ENST00000310018 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.52
ATP6V0A4-201ENST00000310018 NCLP19338 710 aaKnown RBP18.3■□□□□ 0.52
ATP6V0A4-201ENST00000310018 EMILIN1Q9Y6C2 1016 aa18.3■□□□□ 0.52
ATP6V0A4-201ENST00000310018 IQSEC2Q5JU85 1478 aa18.3■□□□□ 0.52
ATP6V0A4-201ENST00000310018 FMN2Q9NZ56 1722 aa18.3■□□□□ 0.52
ATP6V0A4-201ENST00000310018 NEUROD2Q15784 382 aa18.3■□□□□ 0.52
ATP6V0A4-201ENST00000310018 USP6P35125 1406 aa18.3■□□□□ 0.52
ATP6V0A4-201ENST00000310018 ZNF692Q9BU19 519 aaPredicted RBP18.29■□□□□ 0.52
ATP6V0A4-201ENST00000310018 TTC21BQ7Z4L5 1316 aa18.29■□□□□ 0.52
ATP6V0A4-201ENST00000310018 U2SURPO15042 1029 aaKnown RBP18.29■□□□□ 0.52
ATP6V0A4-201ENST00000310018 TBC1D32Q96NH3 1257 aa18.29■□□□□ 0.52
ATP6V0A4-201ENST00000310018 DMTNQ08495 405 aa18.29■□□□□ 0.52
ATP6V0A4-201ENST00000310018 COG6Q9Y2V7 657 aa18.29■□□□□ 0.52
ATP6V0A4-201ENST00000310018 RUNDC1Q96C34 613 aa18.28■□□□□ 0.52
ATP6V0A4-201ENST00000310018 PNPLA6Q8IY17 1366 aa18.28■□□□□ 0.52
ATP6V0A4-201ENST00000310018 FAM177BA6PVY3 158 aa18.28■□□□□ 0.52
ATP6V0A4-201ENST00000310018 CCDC173Q0VFZ6 552 aa18.28■□□□□ 0.52
ATP6V0A4-201ENST00000310018 RRS1Q15050 365 aaKnown RBP18.27■□□□□ 0.52
ATP6V0A4-201ENST00000310018 DUSP27Q5VZP5 1158 aa18.27■□□□□ 0.52
ATP6V0A4-201ENST00000310018 TCP11L2Q8N4U5 519 aa18.27■□□□□ 0.52
ATP6V0A4-201ENST00000310018 GOLGA2Q08379 1002 aa18.27■□□□□ 0.52
ATP6V0A4-201ENST00000310018 COG3Q96JB2 828 aa18.27■□□□□ 0.52
ATP6V0A4-201ENST00000310018 ZSCAN20P17040 1043 aaPredicted RBP18.27■□□□□ 0.51
ATP6V0A4-201ENST00000310018 PANK1Q8TE04 598 aa18.26■□□□□ 0.51
ATP6V0A4-201ENST00000310018 SSH2Q76I76 1423 aa18.26■□□□□ 0.51
ATP6V0A4-201ENST00000310018 DNTTIP2Q5QJE6 756 aaKnown RBP18.25■□□□□ 0.51
ATP6V0A4-201ENST00000310018 SLFN5Q08AF3 891 aa18.25■□□□□ 0.51
ATP6V0A4-201ENST00000310018 HSCBQ8IWL3 235 aa18.25■□□□□ 0.51
ATP6V0A4-201ENST00000310018 MPNDQ8N594 471 aa18.25■□□□□ 0.51
ATP6V0A4-201ENST00000310018 DIAPH1O60610 1272 aaKnown RBP18.25■□□□□ 0.51
ATP6V0A4-201ENST00000310018 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
ATP6V0A4-201ENST00000310018 TNPO1Q92973 898 aaKnown RBP18.24■□□□□ 0.51
ATP6V0A4-201ENST00000310018 NGDNQ8NEJ9 315 aaKnown RBP18.24■□□□□ 0.51
ATP6V0A4-201ENST00000310018 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
ATP6V0A4-201ENST00000310018 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
ATP6V0A4-201ENST00000310018 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
ATP6V0A4-201ENST00000310018 HSPA2P54652 639 aa18.23■□□□□ 0.51
ATP6V0A4-201ENST00000310018 ZNF830Q96NB3 372 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms