RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 CCDC69A6NI79 296 aa15.19■□□□□ 0.02
SPTBN2-201ENST00000309996 SSX2IPQ9Y2D8 614 aa15.19■□□□□ 0.02
SPTBN2-201ENST00000309996 MIA2Q96PC5 1412 aa15.18■□□□□ 0.02
SPTBN2-201ENST00000309996 PPM1EQ8WY54 764 aa15.18■□□□□ 0.02
SPTBN2-201ENST00000309996 EPB41L2O43491 1005 aaKnown RBP15.18■□□□□ 0.02
SPTBN2-201ENST00000309996 EIF3JO75822 258 aaKnown RBP15.18■□□□□ 0.02
SPTBN2-201ENST00000309996 IQCEQ6IPM2 695 aa15.18■□□□□ 0.02
SPTBN2-201ENST00000309996 MCM2P49736 904 aa15.18■□□□□ 0.02
SPTBN2-201ENST00000309996 FEZ1Q99689 392 aa15.18■□□□□ 0.02
SPTBN2-201ENST00000309996 BMP2KQ9NSY1 1161 aaPredicted RBP15.18■□□□□ 0.02
SPTBN2-201ENST00000309996 LRSAM1Q6UWE0 723 aa15.17■□□□□ 0.02
SPTBN2-201ENST00000309996 GPRASP1Q5JY77 1395 aa15.17■□□□□ 0.02
SPTBN2-201ENST00000309996 VTI1AQ96AJ9 217 aa15.17■□□□□ 0.02
SPTBN2-201ENST00000309996 DYDC1Q8WWB3 177 aa15.17■□□□□ 0.02
SPTBN2-201ENST00000309996 CEP63Q96MT8 703 aa15.17■□□□□ 0.02
SPTBN2-201ENST00000309996 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
SPTBN2-201ENST00000309996 HMGB2P26583 209 aaKnown RBP15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 DDX54Q8TDD1 881 aaKnown RBP15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 TRAK2O60296 914 aa15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 ABTB2Q8N961 1025 aa15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 FAM193AP78312 1265 aa15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 ESCO1Q5FWF5 840 aa15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 PDS5BQ9NTI5 1447 aa15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 CCDC30Q5VVM6 783 aa15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 TRIM22Q8IYM9 498 aa15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 PUS7Q96PZ0 661 aaKnown RBP15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 NACAP1Q9BZK3 213 aa15.16■□□□□ 0.02
SPTBN2-201ENST00000309996 GOLGA6L10A0A0M3HER8 536 aa15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 ERLIN1O75477 346 aa15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 AAMPQ13685 434 aa15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 FAM177A1Q8N128 213 aaPredicted RBP15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 ZNF710Q8N1W2 664 aa15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 FIBPO43427 364 aa15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 PRPF40AO75400 957 aaKnown RBP15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 RGS22Q8NE09 1264 aa15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 NUP133Q8WUM0 1156 aa15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 NFKBIBQ15653 356 aa15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 TOM1L2Q6ZVM7 507 aa15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 CETN2P41208 172 aa15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 LRRFIP2Q9Y608 721 aaKnown RBP15.15■□□□□ 0.02
SPTBN2-201ENST00000309996 SURF6O75683 361 aaKnown RBP15.14■□□□□ 0.01
SPTBN2-201ENST00000309996 PRKRIP1Q9H875 184 aaPredicted RBP15.14■□□□□ 0.01
SPTBN2-201ENST00000309996 CCDC192P0DO97 292 aa15.14■□□□□ 0.01
SPTBN2-201ENST00000309996 RFX1P22670 979 aa15.14■□□□□ 0.01
SPTBN2-201ENST00000309996 NEK4P51957 841 aa15.14■□□□□ 0.01
SPTBN2-201ENST00000309996 JAKMIP3Q5VZ66 844 aa15.14■□□□□ 0.01
SPTBN2-201ENST00000309996 FERMT2Q96AC1 680 aa15.14■□□□□ 0.01
SPTBN2-201ENST00000309996 LRRCC1Q9C099 1032 aa15.14■□□□□ 0.01
SPTBN2-201ENST00000309996 TNMDQ9H2S6 317 aa15.13■□□□□ 0.01
SPTBN2-201ENST00000309996 CABP4P57796 275 aa15.13■□□□□ 0.01
SPTBN2-201ENST00000309996 ME1P48163 572 aa15.13■□□□□ 0.01
SPTBN2-201ENST00000309996 PANK1Q8TE04 598 aa15.13■□□□□ 0.01
SPTBN2-201ENST00000309996 ANKRD1Q15327 319 aa15.13■□□□□ 0.01
SPTBN2-201ENST00000309996 CBFA2T2O43439 604 aa15.12■□□□□ 0.01
SPTBN2-201ENST00000309996 BICDL1Q6ZP65 573 aa15.12■□□□□ 0.01
SPTBN2-201ENST00000309996 GNAI3P08754 354 aa15.12■□□□□ 0.01
SPTBN2-201ENST00000309996 NOP2P46087 812 aaKnown RBP15.12■□□□□ 0.01
SPTBN2-201ENST00000309996 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
SPTBN2-201ENST00000309996 PPP1R12BO60237 982 aaPredicted RBP15.12■□□□□ 0.01
SPTBN2-201ENST00000309996 ZWINTO95229 277 aa15.12■□□□□ 0.01
SPTBN2-201ENST00000309996 USP8P40818 1118 aa15.12■□□□□ 0.01
SPTBN2-201ENST00000309996 BCCIPQ9P287 314 aaKnown RBP eCLIP15.12■□□□□ 0.01
SPTBN2-201ENST00000309996 GIGYF2Q6Y7W6 1299 aaKnown RBP15.11■□□□□ 0.01
SPTBN2-201ENST00000309996 CRACR2BQ8N4Y2 399 aaPredicted RBP15.11■□□□□ 0.01
SPTBN2-201ENST00000309996 PIBF1Q8WXW3 757 aa15.11■□□□□ 0.01
SPTBN2-201ENST00000309996 STK3Q13188 491 aa15.11■□□□□ 0.01
SPTBN2-201ENST00000309996 RBM10P98175 930 aaKnown RBP15.11■□□□□ 0.01
SPTBN2-201ENST00000309996 SLC26A8Q96RN1 970 aa15.11■□□□□ 0.01
SPTBN2-201ENST00000309996 PODXL2Q9NZ53 605 aa15.1■□□□□ 0.01
SPTBN2-201ENST00000309996 CCDC57Q2TAC2 916 aa15.1■□□□□ 0.01
SPTBN2-201ENST00000309996 AEBP1Q8IUX7 1158 aa15.1■□□□□ 0.01
SPTBN2-201ENST00000309996 ZNF354CQ86Y25 554 aa15.1■□□□□ 0.01
SPTBN2-201ENST00000309996 NOL7Q9UMY1 257 aaKnown RBP15.1■□□□□ 0.01
SPTBN2-201ENST00000309996 FHOD3Q2V2M9 1422 aa15.1■□□□□ 0.01
SPTBN2-201ENST00000309996 KIAA1328Q86T90 577 aa15.1■□□□□ 0.01
SPTBN2-201ENST00000309996 ZNF428Q96B54 188 aa15.1■□□□□ 0.01
SPTBN2-201ENST00000309996 CYP46A1Q9Y6A2 500 aa15.09■□□□□ 0.01
SPTBN2-201ENST00000309996 TAF3Q5VWG9 929 aa15.09■□□□□ 0.01
SPTBN2-201ENST00000309996 SEC63Q9UGP8 760 aaKnown RBP15.09■□□□□ 0.01
SPTBN2-201ENST00000309996 TATP17735 454 aaPredicted RBP15.09■□□□□ 0.01
SPTBN2-201ENST00000309996 FAM69CQ0P6D2 419 aa15.09■□□□□ 0.01
SPTBN2-201ENST00000309996 ZPR1O75312 459 aa15.09■□□□□ 0.01
SPTBN2-201ENST00000309996 TDRD9Q8NDG6 1382 aaKnown RBP15.09■□□□□ 0.01
SPTBN2-201ENST00000309996 TDO2P48775 406 aa15.08■□□□□ 0.01
SPTBN2-201ENST00000309996 GNAI2P04899 355 aa15.08■□□□□ 0
SPTBN2-201ENST00000309996 PROSER2Q86WR7 435 aaPredicted RBP15.08■□□□□ 0
SPTBN2-201ENST00000309996 MAP2K1Q02750 393 aaPredicted RBP15.08■□□□□ 0
SPTBN2-201ENST00000309996 ZNF397Q8NF99 534 aaPredicted RBP15.08■□□□□ 0
SPTBN2-201ENST00000309996 DHX57Q6P158 1386 aaKnown RBP15.08■□□□□ 0
SPTBN2-201ENST00000309996 NLRP6P59044 892 aa15.08■□□□□ 0
SPTBN2-201ENST00000309996 PKNOX2Q96KN3 472 aa15.07■□□□□ 0
SPTBN2-201ENST00000309996 ANKIB1Q9P2G1 1089 aa15.07■□□□□ 0
SPTBN2-201ENST00000309996 PLEKHO1Q53GL0 409 aaPredicted RBP15.07■□□□□ 0
SPTBN2-201ENST00000309996 CEP57L1Q8IYX8 460 aa15.07■□□□□ 0
SPTBN2-201ENST00000309996 CCDC102AQ96A19 550 aa15.07■□□□□ 0
SPTBN2-201ENST00000309996 FKBP4Q02790 459 aaKnown RBP eCLIP15.07■□□□□ 0
SPTBN2-201ENST00000309996 CDKL5O76039 1030 aa15.06■□□□□ 0
SPTBN2-201ENST00000309996 TAF4BQ92750 862 aa15.06■□□□□ 0
SPTBN2-201ENST00000309996 LIG1P18858 919 aa15.06■□□□□ 0
SPTBN2-201ENST00000309996 GAS2L2Q8NHY3 880 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms