RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 ZNF853P0CG23 659 aa19.28■□□□□ 0.68
SPIRE1-201ENST00000309836 BECN1Q14457 450 aa19.28■□□□□ 0.68
SPIRE1-201ENST00000309836 ZNF428Q96B54 188 aa19.28■□□□□ 0.68
SPIRE1-201ENST00000309836 CCDC61Q9Y6R9 512 aa19.28■□□□□ 0.68
SPIRE1-201ENST00000309836 NRKQ7Z2Y5 1582 aa19.28■□□□□ 0.68
SPIRE1-201ENST00000309836 VAMP4O75379 141 aa19.28■□□□□ 0.68
SPIRE1-201ENST00000309836 MRPL50Q8N5N7 158 aaKnown RBP19.28■□□□□ 0.68
SPIRE1-201ENST00000309836 COG3Q96JB2 828 aa19.28■□□□□ 0.68
SPIRE1-201ENST00000309836 UPF2Q9HAU5 1272 aaKnown RBP19.28■□□□□ 0.68
SPIRE1-201ENST00000309836 IFT57Q9NWB7 429 aa19.28■□□□□ 0.68
SPIRE1-201ENST00000309836 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
SPIRE1-201ENST00000309836 RRS1Q15050 365 aaKnown RBP19.27■□□□□ 0.68
SPIRE1-201ENST00000309836 TSPYL6Q8N831 410 aa19.27■□□□□ 0.68
SPIRE1-201ENST00000309836 PIK3R4Q99570 1358 aa19.27■□□□□ 0.68
SPIRE1-201ENST00000309836 CALD1Q05682 793 aaKnown RBP19.26■□□□□ 0.67
SPIRE1-201ENST00000309836 ROBO2Q9HCK4 1378 aa19.26■□□□□ 0.67
SPIRE1-201ENST00000309836 TMEM2Q9UHN6 1383 aa19.26■□□□□ 0.67
SPIRE1-201ENST00000309836 GNAI1P63096 354 aa19.26■□□□□ 0.67
SPIRE1-201ENST00000309836 ESF1Q9H501 851 aaKnown RBP19.26■□□□□ 0.67
SPIRE1-201ENST00000309836 MBIPQ9NS73 344 aa19.26■□□□□ 0.67
SPIRE1-201ENST00000309836 GSE1Q14687 1217 aa19.25■□□□□ 0.67
SPIRE1-201ENST00000309836 ADAMTS13Q76LX8 1427 aa19.25■□□□□ 0.67
SPIRE1-201ENST00000309836 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.24■□□□□ 0.67
SPIRE1-201ENST00000309836 TOPAZ1Q8N9V7 1692 aa19.24■□□□□ 0.67
SPIRE1-201ENST00000309836 NUCB1Q02818 461 aa19.24■□□□□ 0.67
SPIRE1-201ENST00000309836 HDGFP51858 240 aaKnown RBP19.23■□□□□ 0.67
SPIRE1-201ENST00000309836 TBC1D2Q9BYX2 928 aa19.23■□□□□ 0.67
SPIRE1-201ENST00000309836 ARHGAP45Q92619 1136 aa19.22■□□□□ 0.67
SPIRE1-201ENST00000309836 ANTXR1Q9H6X2 564 aa19.22■□□□□ 0.67
SPIRE1-201ENST00000309836 ZBTB7BO15156 539 aaPredicted RBP19.21■□□□□ 0.67
SPIRE1-201ENST00000309836 ZNF692Q9BU19 519 aaPredicted RBP19.21■□□□□ 0.67
SPIRE1-201ENST00000309836 ABCC4O15439 1325 aa19.2■□□□□ 0.66
SPIRE1-201ENST00000309836 LMOD3Q0VAK6 560 aa19.2■□□□□ 0.66
SPIRE1-201ENST00000309836 C8orf58Q8NAV2 365 aa19.2■□□□□ 0.66
SPIRE1-201ENST00000309836 CFAP44Q96MT7 982 aa19.2■□□□□ 0.66
SPIRE1-201ENST00000309836 FAM83GA6ND36 823 aa19.2■□□□□ 0.66
SPIRE1-201ENST00000309836 MFAP1P55081 439 aaKnown RBP19.2■□□□□ 0.66
SPIRE1-201ENST00000309836 SLKQ9H2G2 1235 aaPredicted RBP19.2■□□□□ 0.66
SPIRE1-201ENST00000309836 TTC21BQ7Z4L5 1316 aa19.19■□□□□ 0.66
SPIRE1-201ENST00000309836 ELL2O00472 640 aaPredicted RBP19.19■□□□□ 0.66
SPIRE1-201ENST00000309836 C22orf23Q9BZE7 217 aa19.19■□□□□ 0.66
SPIRE1-201ENST00000309836 PEAK1Q9H792 1746 aa19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 OVOS2A0A0J9YW53 1432 aa19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 OVOS2Q6IE36 1432 aa19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 TWISTNBQ3B726 338 aaPredicted RBP19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 LNPKQ9C0E8 428 aa19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 NALCNQ8IZF0 1738 aa19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 DCTN1Q14203 1278 aa19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 EIF4A2Q14240 407 aaKnown RBP19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 CHD1LQ86WJ1 897 aa19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 AEBP1Q8IUX7 1158 aa19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 C1orf115Q9H7X2 142 aa19.18■□□□□ 0.66
SPIRE1-201ENST00000309836 PLEKHG1Q9ULL1 1385 aa19.17■□□□□ 0.66
SPIRE1-201ENST00000309836 ACEP12821 1306 aa19.16■□□□□ 0.66
SPIRE1-201ENST00000309836 LTKP29376 864 aa19.16■□□□□ 0.66
SPIRE1-201ENST00000309836 PTPRUQ92729 1446 aa19.15■□□□□ 0.66
SPIRE1-201ENST00000309836 RGPD1P0DJD0 1748 aa19.15■□□□□ 0.66
SPIRE1-201ENST00000309836 PLEKHG3A1L390 1219 aa19.15■□□□□ 0.66
SPIRE1-201ENST00000309836 SIRT2Q8IXJ6 389 aa19.15■□□□□ 0.66
SPIRE1-201ENST00000309836 USP6P35125 1406 aa19.15■□□□□ 0.66
SPIRE1-201ENST00000309836 CHMP4BQ9H444 224 aaKnown RBP19.14■□□□□ 0.65
SPIRE1-201ENST00000309836 SULT6B1Q6IMI4 303 aa19.13■□□□□ 0.65
SPIRE1-201ENST00000309836 IL27Q8NEV9 243 aa19.13■□□□□ 0.65
SPIRE1-201ENST00000309836 GCC1Q96CN9 775 aa19.13■□□□□ 0.65
SPIRE1-201ENST00000309836 API5Q9BZZ5 524 aaKnown RBP19.13■□□□□ 0.65
SPIRE1-201ENST00000309836 USP31Q70CQ4 1352 aa19.12■□□□□ 0.65
SPIRE1-201ENST00000309836 SSH2Q76I76 1423 aa19.12■□□□□ 0.65
SPIRE1-201ENST00000309836 ANKRD45Q5TZF3 282 aa19.11■□□□□ 0.65
SPIRE1-201ENST00000309836 NUTM2FA1L443 756 aa19.11■□□□□ 0.65
SPIRE1-201ENST00000309836 BMP2KLQ5H9B9 411 aa19.1■□□□□ 0.65
SPIRE1-201ENST00000309836 KIF24Q5T7B8 1368 aa19.1■□□□□ 0.65
SPIRE1-201ENST00000309836 RGS12O14924 1447 aa19.09■□□□□ 0.65
SPIRE1-201ENST00000309836 CHL1O00533 1208 aa19.08■□□□□ 0.65
SPIRE1-201ENST00000309836 RBM25P49756 843 aaKnown RBP19.08■□□□□ 0.65
SPIRE1-201ENST00000309836 KRT24Q2M2I5 525 aa19.08■□□□□ 0.65
SPIRE1-201ENST00000309836 HSP90AB2PQ58FF8 381 aa19.08■□□□□ 0.65
SPIRE1-201ENST00000309836 SPRYD3Q8NCJ5 442 aa19.08■□□□□ 0.65
SPIRE1-201ENST00000309836 FMN2Q9NZ56 1722 aa19.07■□□□□ 0.64
SPIRE1-201ENST00000309836 BRPF3Q9ULD4 1205 aa19.07■□□□□ 0.64
SPIRE1-201ENST00000309836 MCM10Q7L590 875 aa19.07■□□□□ 0.64
SPIRE1-201ENST00000309836 SLC26A8Q96RN1 970 aa19.07■□□□□ 0.64
SPIRE1-201ENST00000309836 CRB1P82279 1406 aa19.06■□□□□ 0.64
SPIRE1-201ENST00000309836 CEBPAP49715 358 aaPredicted RBP19.06■□□□□ 0.64
SPIRE1-201ENST00000309836 ARHGAP23Q9P227 1491 aa19.06■□□□□ 0.64
SPIRE1-201ENST00000309836 KIAA0232Q92628 1395 aa19.06■□□□□ 0.64
SPIRE1-201ENST00000309836 INTS3Q68E01 1043 aaKnown RBP19.05■□□□□ 0.64
SPIRE1-201ENST00000309836 SLIT1O75093 1534 aa19.05■□□□□ 0.64
SPIRE1-201ENST00000309836 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
SPIRE1-201ENST00000309836 RIMS1Q86UR5 1692 aaKnown RBP19.05■□□□□ 0.64
SPIRE1-201ENST00000309836 NCOA3Q9Y6Q9 1424 aa19.04■□□□□ 0.64
SPIRE1-201ENST00000309836 DIP2AQ14689 1571 aa19.04■□□□□ 0.64
SPIRE1-201ENST00000309836 ATP10DQ9P241 1426 aa19.03■□□□□ 0.64
SPIRE1-201ENST00000309836 MAP3K19Q56UN5 1328 aa19.03■□□□□ 0.64
SPIRE1-201ENST00000309836 HSCBQ8IWL3 235 aa19.03■□□□□ 0.64
SPIRE1-201ENST00000309836 AMOTL2Q9Y2J4 779 aa19.03■□□□□ 0.64
SPIRE1-201ENST00000309836 TTC21AQ8NDW8 1320 aa19.02■□□□□ 0.64
SPIRE1-201ENST00000309836 SOX12O15370 315 aa19.02■□□□□ 0.64
SPIRE1-201ENST00000309836 TBC1D9Q6ZT07 1266 aa19.02■□□□□ 0.64
SPIRE1-201ENST00000309836 CHMP5Q9NZZ3 219 aa19.02■□□□□ 0.64
SPIRE1-201ENST00000309836 RGPD8O14715 1765 aaPredicted RBP19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms