RNA–Protein interactions for RNA: ENST00000309755.8

KLHL3-201, Transcript of kelch like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL3, Length 6,806 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-201ENST00000309755 TAX1BP1Q86VP1 789 aa13.1□□□□□ -0.31
KLHL3-201ENST00000309755 SIL1Q9H173 461 aa13.1□□□□□ -0.31
KLHL3-201ENST00000309755 ANKRD62A6NC57 917 aa13.1□□□□□ -0.31
KLHL3-201ENST00000309755 ERC1Q8IUD2 1116 aa13.1□□□□□ -0.31
KLHL3-201ENST00000309755 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
KLHL3-201ENST00000309755 FAM177BA6PVY3 158 aa13.09□□□□□ -0.31
KLHL3-201ENST00000309755 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
KLHL3-201ENST00000309755 TTC39AQ5SRH9 613 aa13.09□□□□□ -0.31
KLHL3-201ENST00000309755 TANGO6Q9C0B7 1094 aa13.09□□□□□ -0.31
KLHL3-201ENST00000309755 CAMK4Q16566 473 aa13.09□□□□□ -0.31
KLHL3-201ENST00000309755 SEPT7Q16181 437 aaKnown RBP13.08□□□□□ -0.31
KLHL3-201ENST00000309755 GOLGA6L7A0A1B0GV03 622 aa13.08□□□□□ -0.32
KLHL3-201ENST00000309755 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
KLHL3-201ENST00000309755 UPF3BQ9BZI7 483 aaKnown RBP13.08□□□□□ -0.32
KLHL3-201ENST00000309755 PDRG1Q9NUG6 133 aa13.08□□□□□ -0.32
KLHL3-201ENST00000309755 ATF7IPQ6VMQ6 1270 aa13.08□□□□□ -0.32
KLHL3-201ENST00000309755 NLRP2Q9NX02 1062 aa13.08□□□□□ -0.32
KLHL3-201ENST00000309755 JAKMIP1Q96N16 626 aaKnown RBP13.08□□□□□ -0.32
KLHL3-201ENST00000309755 CEP57L1Q8IYX8 460 aa13.07□□□□□ -0.32
KLHL3-201ENST00000309755 UBXN4Q92575 508 aa13.07□□□□□ -0.32
KLHL3-201ENST00000309755 SKAP1Q86WV1 359 aa13.07□□□□□ -0.32
KLHL3-201ENST00000309755 ZHX3Q9H4I2 956 aa13.07□□□□□ -0.32
KLHL3-201ENST00000309755 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
KLHL3-201ENST00000309755 STIM1Q13586 685 aa13.07□□□□□ -0.32
KLHL3-201ENST00000309755 CWC27Q6UX04 472 aaKnown RBP13.07□□□□□ -0.32
KLHL3-201ENST00000309755 BLOC1S2Q6QNY1 142 aa13.06□□□□□ -0.32
KLHL3-201ENST00000309755 GAS2L2Q8NHY3 880 aa13.06□□□□□ -0.32
KLHL3-201ENST00000309755 LUC7LQ9NQ29 371 aaKnown RBP13.06□□□□□ -0.32
KLHL3-201ENST00000309755 USP8P40818 1118 aa13.06□□□□□ -0.32
KLHL3-201ENST00000309755 CCDC158Q5M9N0 1113 aa13.06□□□□□ -0.32
KLHL3-201ENST00000309755 NLRP6P59044 892 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 MAP3K11Q16584 847 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 CFAP45Q9UL16 551 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 CUX1P39880 1505 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 CCT4P50991 539 aaKnown RBP13.05□□□□□ -0.32
KLHL3-201ENST00000309755 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 TMCO3Q6UWJ1 677 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 CCDC69A6NI79 296 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 CFAP70Q5T0N1 1121 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 TRIM22Q8IYM9 498 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 ZRSR2Q15696 482 aaKnown RBP13.05□□□□□ -0.32
KLHL3-201ENST00000309755 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 TAF3Q5VWG9 929 aa13.05□□□□□ -0.32
KLHL3-201ENST00000309755 TMEM132AQ24JP5 1023 aa13.04□□□□□ -0.32
KLHL3-201ENST00000309755 SLC3A2P08195 630 aaKnown RBP13.04□□□□□ -0.32
KLHL3-201ENST00000309755 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
KLHL3-201ENST00000309755 HDGFL1Q5TGJ6 251 aa13.04□□□□□ -0.32
KLHL3-201ENST00000309755 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
KLHL3-201ENST00000309755 EPB41L2O43491 1005 aaKnown RBP13.04□□□□□ -0.32
KLHL3-201ENST00000309755 IBSPP21815 317 aaPredicted RBP13.04□□□□□ -0.32
KLHL3-201ENST00000309755 CFAP100Q494V2 611 aa13.04□□□□□ -0.32
KLHL3-201ENST00000309755 KIAA1328Q86T90 577 aa13.04□□□□□ -0.32
KLHL3-201ENST00000309755 WDR63Q8IWG1 891 aa13.04□□□□□ -0.32
KLHL3-201ENST00000309755 LRRC9Q6ZRR7 1453 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 PTPRGP23470 1445 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 ANKRD50Q9ULJ7 1429 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 IQCEQ6IPM2 695 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 TRERF1Q96PN7 1200 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 SMTNL1A8MU46 457 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 PDCL3Q9H2J4 239 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 AACSQ86V21 672 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 ZSCAN31Q96LW9 406 aaPredicted RBP13.03□□□□□ -0.32
KLHL3-201ENST00000309755 PRDM2Q13029 1718 aa13.03□□□□□ -0.32
KLHL3-201ENST00000309755 CASTP20810 708 aaKnown RBP13.03□□□□□ -0.32
KLHL3-201ENST00000309755 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.03□□□□□ -0.32
KLHL3-201ENST00000309755 ARHGAP29Q52LW3 1261 aa13.02□□□□□ -0.32
KLHL3-201ENST00000309755 SEPT11Q9NVA2 429 aaKnown RBP13.02□□□□□ -0.32
KLHL3-201ENST00000309755 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.32
KLHL3-201ENST00000309755 KIF21BO75037 1637 aa13.02□□□□□ -0.32
KLHL3-201ENST00000309755 FERMT3Q86UX7 667 aa13.02□□□□□ -0.33
KLHL3-201ENST00000309755 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
KLHL3-201ENST00000309755 SRCIN1Q9C0H9 1055 aa13.02□□□□□ -0.33
KLHL3-201ENST00000309755 CADPSQ9ULU8 1353 aa13.02□□□□□ -0.33
KLHL3-201ENST00000309755 TXLNBQ8N3L3 684 aa13.02□□□□□ -0.33
KLHL3-201ENST00000309755 NBPF8Q3BBV2 869 aa13.02□□□□□ -0.33
KLHL3-201ENST00000309755 KIF6Q6ZMV9 814 aa13.02□□□□□ -0.33
KLHL3-201ENST00000309755 SLC12A5Q9H2X9 1139 aa13.02□□□□□ -0.33
KLHL3-201ENST00000309755 POLR3GO15318 223 aaPredicted RBP13.01□□□□□ -0.33
KLHL3-201ENST00000309755 SULT6B1Q6IMI4 303 aa13.01□□□□□ -0.33
KLHL3-201ENST00000309755 ATP2B2Q01814 1243 aa13.01□□□□□ -0.33
KLHL3-201ENST00000309755 FKBP4Q02790 459 aaKnown RBP eCLIP13.01□□□□□ -0.33
KLHL3-201ENST00000309755 CCDC83Q8IWF9 413 aa13.01□□□□□ -0.33
KLHL3-201ENST00000309755 CCDC148Q8NFR7 591 aa13.01□□□□□ -0.33
KLHL3-201ENST00000309755 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
KLHL3-201ENST00000309755 CRACR2AQ9BSW2 395 aa13.01□□□□□ -0.33
KLHL3-201ENST00000309755 URI1O94763 535 aaPredicted RBP13□□□□□ -0.33
KLHL3-201ENST00000309755 GIMAP7Q8NHV1 300 aa13□□□□□ -0.33
KLHL3-201ENST00000309755 SRGAP3O43295 1099 aa13□□□□□ -0.33
KLHL3-201ENST00000309755 CASQ1P31415 396 aa13□□□□□ -0.33
KLHL3-201ENST00000309755 EIF5P55010 431 aaKnown RBP13□□□□□ -0.33
KLHL3-201ENST00000309755 CGNQ9P2M7 1197 aaKnown RBP13□□□□□ -0.33
KLHL3-201ENST00000309755 NOL7Q9UMY1 257 aaKnown RBP13□□□□□ -0.33
KLHL3-201ENST00000309755 ANKRD18AQ8IVF6 992 aa13□□□□□ -0.33
KLHL3-201ENST00000309755 CCDC183Q5T5S1 534 aa13□□□□□ -0.33
KLHL3-201ENST00000309755 ABTB2Q8N961 1025 aa13□□□□□ -0.33
KLHL3-201ENST00000309755 SSFA2P28290 1259 aa12.99□□□□□ -0.33
KLHL3-201ENST00000309755 KIF18AQ8NI77 898 aa12.99□□□□□ -0.33
KLHL3-201ENST00000309755 TMX1Q9H3N1 280 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms