RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ZIC2O95409 532 aaPredicted RBP8.29□□□□□ -1.08
CKS1B-201ENST00000308987 CLCN1P35523 988 aa8.29□□□□□ -1.08
CKS1B-201ENST00000308987 KRT76Q01546 638 aa8.29□□□□□ -1.08
CKS1B-201ENST00000308987 GPR161Q8N6U8 529 aaKnown RBP8.29□□□□□ -1.08
CKS1B-201ENST00000308987 FAM174AQ8TBP5 190 aa8.29□□□□□ -1.08
CKS1B-201ENST00000308987 ITPKCQ96DU7 683 aa8.29□□□□□ -1.08
CKS1B-201ENST00000308987 ADCY10Q96PN6 1610 aa8.29□□□□□ -1.08
CKS1B-201ENST00000308987 PRR7Q8TB68 274 aa8.28□□□□□ -1.08
CKS1B-201ENST00000308987 CDK15Q96Q40 435 aa8.28□□□□□ -1.08
CKS1B-201ENST00000308987 TSPOAP1O95153 1857 aa8.28□□□□□ -1.08
CKS1B-201ENST00000308987 ARID5BQ14865 1188 aa8.27□□□□□ -1.09
CKS1B-201ENST00000308987 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
CKS1B-201ENST00000308987 CNTNAP3BQ96NU0 1288 aa8.27□□□□□ -1.09
CKS1B-201ENST00000308987 CNTNAP3Q9BZ76 1288 aa8.27□□□□□ -1.09
CKS1B-201ENST00000308987 DIP2BQ9P265 1576 aa8.27□□□□□ -1.09
CKS1B-201ENST00000308987 BMP2P12643 396 aa8.26□□□□□ -1.09
CKS1B-201ENST00000308987 NDUFV2P19404 249 aa8.26□□□□□ -1.09
CKS1B-201ENST00000308987 HAP1P54257 671 aaPredicted RBP8.26□□□□□ -1.09
CKS1B-201ENST00000308987 RNF225M0QZC1 329 aaPredicted RBP8.25□□□□□ -1.09
CKS1B-201ENST00000308987 NR3C2P08235 984 aa8.25□□□□□ -1.09
CKS1B-201ENST00000308987 DESI1Q6ICB0 168 aa8.25□□□□□ -1.09
CKS1B-201ENST00000308987 SPIRE2Q8WWL2 714 aa8.25□□□□□ -1.09
CKS1B-201ENST00000308987 FOXJ1Q92949 421 aa8.25□□□□□ -1.09
CKS1B-201ENST00000308987 ABCC10Q5T3U5 1492 aa8.25□□□□□ -1.09
CKS1B-201ENST00000308987 MAPKBP1O60336 1514 aa8.24□□□□□ -1.09
CKS1B-201ENST00000308987 CTHP32929 405 aa8.24□□□□□ -1.09
CKS1B-201ENST00000308987 GRM5P41594 1212 aa8.24□□□□□ -1.09
CKS1B-201ENST00000308987 NR5A1Q13285 461 aa8.24□□□□□ -1.09
CKS1B-201ENST00000308987 DNMT3LQ9UJW3 386 aa8.24□□□□□ -1.09
CKS1B-201ENST00000308987 SOS2Q07890 1332 aaPredicted RBP8.24□□□□□ -1.09
CKS1B-201ENST00000308987 MOXD2PA6NHM9 499 aa8.23□□□□□ -1.09
CKS1B-201ENST00000308987 UPP2O95045 317 aa8.23□□□□□ -1.09
CKS1B-201ENST00000308987 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
CKS1B-201ENST00000308987 LINC00528Q8N1L1 170 aa8.23□□□□□ -1.09
CKS1B-201ENST00000308987 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
CKS1B-201ENST00000308987 PPRC1Q5VV67 1664 aaKnown RBP8.21□□□□□ -1.09
CKS1B-201ENST00000308987 SPDYE5A6NIY4 337 aa8.21□□□□□ -1.1
CKS1B-201ENST00000308987 SPTLC1O15269 473 aa8.21□□□□□ -1.1
CKS1B-201ENST00000308987 FAM69CQ0P6D2 419 aa8.21□□□□□ -1.1
CKS1B-201ENST00000308987 MTMR2Q13614 643 aa8.21□□□□□ -1.1
CKS1B-201ENST00000308987 ZNF385CQ66K41 422 aaPredicted RBP8.21□□□□□ -1.1
CKS1B-201ENST00000308987 GPAT2Q6NUI2 795 aa8.21□□□□□ -1.1
CKS1B-201ENST00000308987 LYPD8Q6UX82 237 aa8.21□□□□□ -1.1
CKS1B-201ENST00000308987 MEIOBQ8N635 442 aa8.21□□□□□ -1.1
CKS1B-201ENST00000308987 COL25A1Q9BXS0 654 aaPredicted RBP8.21□□□□□ -1.1
CKS1B-201ENST00000308987 SSTR3P32745 418 aaPredicted RBP8.2□□□□□ -1.1
CKS1B-201ENST00000308987 IGF1RP08069 1367 aa8.2□□□□□ -1.1
CKS1B-201ENST00000308987 KIAA0586Q9BVV6 1533 aa8.19□□□□□ -1.1
CKS1B-201ENST00000308987 KDM6BO15054 1643 aa8.19□□□□□ -1.1
CKS1B-201ENST00000308987 TULP1O00294 542 aaPredicted RBP8.19□□□□□ -1.1
CKS1B-201ENST00000308987 IRS1P35568 1242 aa8.19□□□□□ -1.1
CKS1B-201ENST00000308987 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
CKS1B-201ENST00000308987 CUL7Q14999 1698 aa8.18□□□□□ -1.1
CKS1B-201ENST00000308987 IGHA1P01876 353 aa8.18□□□□□ -1.1
CKS1B-201ENST00000308987 PTSQ03393 145 aa8.18□□□□□ -1.1
CKS1B-201ENST00000308987 SVOPQ8N4V2 548 aa8.18□□□□□ -1.1
CKS1B-201ENST00000308987 DNMT3AQ9Y6K1 912 aaPredicted RBP8.18□□□□□ -1.1
CKS1B-201ENST00000308987 AGERQ15109 404 aa8.17□□□□□ -1.1
CKS1B-201ENST00000308987 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.17□□□□□ -1.1
CKS1B-201ENST00000308987 RNFT1Q5M7Z0 435 aa8.17□□□□□ -1.1
CKS1B-201ENST00000308987 WHAMMQ8TF30 809 aa8.17□□□□□ -1.1
CKS1B-201ENST00000308987 NANOS1Q8WY41 292 aaKnown RBP8.17□□□□□ -1.1
CKS1B-201ENST00000308987 TSEN34Q9BSV6 310 aaKnown RBP8.17□□□□□ -1.1
CKS1B-201ENST00000308987 MAP10Q9P2G4 905 aa8.17□□□□□ -1.1
CKS1B-201ENST00000308987 ARHGEF15O94989 841 aa8.16□□□□□ -1.1
CKS1B-201ENST00000308987 FIGNL2A6NMB9 653 aa8.15□□□□□ -1.1
CKS1B-201ENST00000308987 TTLL8A6PVC2 850 aa8.15□□□□□ -1.1
CKS1B-201ENST00000308987 F12P00748 615 aaPredicted RBP8.15□□□□□ -1.1
CKS1B-201ENST00000308987 CFAP99D6REC4 459 aa8.14□□□□□ -1.11
CKS1B-201ENST00000308987 BPHLQ86WA6 291 aaPredicted RBP8.14□□□□□ -1.11
CKS1B-201ENST00000308987 KIF27Q86VH2 1401 aa8.13□□□□□ -1.11
CKS1B-201ENST00000308987 SLURP2P0DP57 97 aa8.13□□□□□ -1.11
CKS1B-201ENST00000308987 MARSP56192 900 aaKnown RBP8.13□□□□□ -1.11
CKS1B-201ENST00000308987 CCDC155Q8N6L0 562 aa8.13□□□□□ -1.11
CKS1B-201ENST00000308987 ABCC2Q92887 1545 aa8.13□□□□□ -1.11
CKS1B-201ENST00000308987 COL17A1Q9UMD9 1497 aaPredicted RBP8.13□□□□□ -1.11
CKS1B-201ENST00000308987 XP32Q5T750 250 aa8.12□□□□□ -1.11
CKS1B-201ENST00000308987 KANK3Q6NY19 840 aa8.12□□□□□ -1.11
CKS1B-201ENST00000308987 VWA5B2Q8N398 1253 aa8.12□□□□□ -1.11
CKS1B-201ENST00000308987 PCDHB15Q9Y5E8 787 aa8.12□□□□□ -1.11
CKS1B-201ENST00000308987 GLI2P10070 1586 aa8.12□□□□□ -1.11
CKS1B-201ENST00000308987 IQGAP2Q13576 1575 aa8.12□□□□□ -1.11
CKS1B-201ENST00000308987 DISP1Q96F81 1524 aa8.12□□□□□ -1.11
CKS1B-201ENST00000308987 PTPRGP23470 1445 aa8.12□□□□□ -1.11
CKS1B-201ENST00000308987 ASXL2Q76L83 1435 aa8.12□□□□□ -1.11
CKS1B-201ENST00000308987 CARMIL1Q5VZK9 1371 aa8.11□□□□□ -1.11
CKS1B-201ENST00000308987 FSHRP23945 695 aa8.11□□□□□ -1.11
CKS1B-201ENST00000308987 FOXK2Q01167 660 aa8.11□□□□□ -1.11
CKS1B-201ENST00000308987 EMILIN1Q9Y6C2 1016 aa8.11□□□□□ -1.11
CKS1B-201ENST00000308987 MAP3K4Q9Y6R4 1608 aa8.11□□□□□ -1.11
CKS1B-201ENST00000308987 TTBK1Q5TCY1 1321 aaPredicted RBP8.1□□□□□ -1.11
CKS1B-201ENST00000308987 GJA5P36382 358 aa8.1□□□□□ -1.11
CKS1B-201ENST00000308987 C1QTNF2Q9BXJ5 285 aa8.1□□□□□ -1.11
CKS1B-201ENST00000308987 ZCCHC11Q5TAX3 1644 aaKnown RBP8.1□□□□□ -1.11
CKS1B-201ENST00000308987 TNIKQ9UKE5 1360 aa8.1□□□□□ -1.11
CKS1B-201ENST00000308987 UHRF1BP1LA0JNW5 1464 aa8.09□□□□□ -1.11
CKS1B-201ENST00000308987 SLC35F4A4IF30 521 aa8.09□□□□□ -1.11
CKS1B-201ENST00000308987 HRCP23327 699 aa8.09□□□□□ -1.11
CKS1B-201ENST00000308987 RSBN1LQ6PCB5 846 aaPredicted RBP8.09□□□□□ -1.11
CKS1B-201ENST00000308987 VASH1Q7L8A9 365 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms