RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
MUC4-201ENST00000308466 RIMS2Q9UQ26 1411 aa13.2□□□□□ -0.3
MUC4-201ENST00000308466 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
MUC4-201ENST00000308466 SPHKAPQ2M3C7 1700 aa13.2□□□□□ -0.3
MUC4-201ENST00000308466 VAMP4O75379 141 aa13.19□□□□□ -0.3
MUC4-201ENST00000308466 PSME1Q06323 249 aa13.19□□□□□ -0.3
MUC4-201ENST00000308466 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
MUC4-201ENST00000308466 CDC45O75419 566 aa13.19□□□□□ -0.3
MUC4-201ENST00000308466 MLH3Q9UHC1 1453 aa13.19□□□□□ -0.3
MUC4-201ENST00000308466 KIF1BO60333 1816 aa13.19□□□□□ -0.3
MUC4-201ENST00000308466 EFCAB6Q5THR3 1501 aa13.19□□□□□ -0.3
MUC4-201ENST00000308466 MAP3K4Q9Y6R4 1608 aa13.19□□□□□ -0.3
MUC4-201ENST00000308466 MCCP23508 829 aa13.19□□□□□ -0.3
MUC4-201ENST00000308466 TEFQ10587 303 aa13.19□□□□□ -0.3
MUC4-201ENST00000308466 F6X3S4 739 aa13.18□□□□□ -0.3
MUC4-201ENST00000308466 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
MUC4-201ENST00000308466 PPIP5K1Q6PFW1 1433 aa13.18□□□□□ -0.3
MUC4-201ENST00000308466 KCNJ4P48050 445 aa13.18□□□□□ -0.3
MUC4-201ENST00000308466 HDAC1Q13547 482 aaPredicted RBP13.18□□□□□ -0.3
MUC4-201ENST00000308466 SMARCA5O60264 1052 aaPredicted RBP13.17□□□□□ -0.3
MUC4-201ENST00000308466 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
MUC4-201ENST00000308466 FOXD4L6Q3SYB3 417 aaPredicted RBP13.17□□□□□ -0.3
MUC4-201ENST00000308466 FOXD4L3Q6VB84 417 aaPredicted RBP13.17□□□□□ -0.3
MUC4-201ENST00000308466 FAM13BQ9NYF5 915 aa13.17□□□□□ -0.3
MUC4-201ENST00000308466 PPP6R1Q9UPN7 881 aa13.17□□□□□ -0.3
MUC4-201ENST00000308466 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
MUC4-201ENST00000308466 ST18O60284 1047 aa13.16□□□□□ -0.3
MUC4-201ENST00000308466 PLEKHF1Q96S99 279 aa13.16□□□□□ -0.3
MUC4-201ENST00000308466 RNF17Q9BXT8 1623 aaKnown RBP13.16□□□□□ -0.3
MUC4-201ENST00000308466 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
MUC4-201ENST00000308466 A0A0G2JS52 829 aa13.16□□□□□ -0.3
MUC4-201ENST00000308466 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
MUC4-201ENST00000308466 TRAK2O60296 914 aa13.16□□□□□ -0.3
MUC4-201ENST00000308466 CSB-PGBD3P0DP91 1061 aa13.16□□□□□ -0.3
MUC4-201ENST00000308466 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
MUC4-201ENST00000308466 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
MUC4-201ENST00000308466 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
MUC4-201ENST00000308466 FGD1P98174 961 aa13.15□□□□□ -0.3
MUC4-201ENST00000308466 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
MUC4-201ENST00000308466 BBXQ8WY36 941 aaPredicted RBP13.15□□□□□ -0.3
MUC4-201ENST00000308466 TTC21BQ7Z4L5 1316 aa13.15□□□□□ -0.3
MUC4-201ENST00000308466 DDX49Q9Y6V7 483 aaKnown RBP13.15□□□□□ -0.3
MUC4-201ENST00000308466 ZHX1Q9UKY1 873 aaPredicted RBP13.15□□□□□ -0.3
MUC4-201ENST00000308466 NUCB1Q02818 461 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 KIAA1211Q6ZU35 1233 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 SMC5Q8IY18 1101 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 ANO2Q9NQ90 1003 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 EXOC6BQ9Y2D4 811 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 IL13P35225 146 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 NEO1Q92859 1461 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 FOXO3O43524 673 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 REC8O95072 547 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 MCM4P33991 863 aa13.14□□□□□ -0.31
MUC4-201ENST00000308466 ABCA6Q8N139 1617 aa13.13□□□□□ -0.31
MUC4-201ENST00000308466 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
MUC4-201ENST00000308466 ZMYM3Q14202 1370 aa13.13□□□□□ -0.31
MUC4-201ENST00000308466 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
MUC4-201ENST00000308466 ABCC3O15438 1527 aa13.12□□□□□ -0.31
MUC4-201ENST00000308466 C16orf71Q8IYS4 520 aaPredicted RBP13.12□□□□□ -0.31
MUC4-201ENST00000308466 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
MUC4-201ENST00000308466 LAMC1P11047 1609 aa13.12□□□□□ -0.31
MUC4-201ENST00000308466 TNRQ92752 1358 aa13.12□□□□□ -0.31
MUC4-201ENST00000308466 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
MUC4-201ENST00000308466 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
MUC4-201ENST00000308466 GNAI2P04899 355 aa13.12□□□□□ -0.31
MUC4-201ENST00000308466 UBTFL1P0CB47 393 aaPredicted RBP13.12□□□□□ -0.31
MUC4-201ENST00000308466 C1orf141Q5JVX7 400 aa13.12□□□□□ -0.31
MUC4-201ENST00000308466 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
MUC4-201ENST00000308466 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
MUC4-201ENST00000308466 RPAP2Q8IXW5 612 aaPredicted RBP13.11□□□□□ -0.31
MUC4-201ENST00000308466 MEIS3Q99687 375 aa13.11□□□□□ -0.31
MUC4-201ENST00000308466 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
MUC4-201ENST00000308466 C9orf78Q9NZ63 289 aaPredicted RBP13.11□□□□□ -0.31
MUC4-201ENST00000308466 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
MUC4-201ENST00000308466 BMP2KLQ5H9B9 411 aa13.1□□□□□ -0.31
MUC4-201ENST00000308466 ARHGAP45Q92619 1136 aa13.1□□□□□ -0.31
MUC4-201ENST00000308466 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
MUC4-201ENST00000308466 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
MUC4-201ENST00000308466 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
MUC4-201ENST00000308466 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
MUC4-201ENST00000308466 GNAI3P08754 354 aa13.1□□□□□ -0.31
MUC4-201ENST00000308466 PLCB2Q00722 1185 aa13.1□□□□□ -0.31
MUC4-201ENST00000308466 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
MUC4-201ENST00000308466 PHF23Q9BUL5 403 aaPredicted RBP13.1□□□□□ -0.31
MUC4-201ENST00000308466 IL1RAPL2Q9NP60 686 aa13.1□□□□□ -0.31
MUC4-201ENST00000308466 HECW2Q9P2P5 1572 aa13.1□□□□□ -0.31
MUC4-201ENST00000308466 AIMP1Q12904 312 aaKnown RBP13.09□□□□□ -0.31
MUC4-201ENST00000308466 CEP152O94986 1710 aa13.09□□□□□ -0.31
MUC4-201ENST00000308466 K7ELQ4 463 aaPredicted RBP13.09□□□□□ -0.31
MUC4-201ENST00000308466 CCT4P50991 539 aaKnown RBP13.09□□□□□ -0.31
MUC4-201ENST00000308466 NEK4P51957 841 aa13.09□□□□□ -0.31
MUC4-201ENST00000308466 MCTP1Q6DN14 999 aa13.09□□□□□ -0.31
MUC4-201ENST00000308466 METP08581 1390 aa13.08□□□□□ -0.31
MUC4-201ENST00000308466 GNAT3A8MTJ3 354 aa13.08□□□□□ -0.32
MUC4-201ENST00000308466 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.32
MUC4-201ENST00000308466 PAXIP1Q6ZW49 1069 aaPredicted RBP13.08□□□□□ -0.32
MUC4-201ENST00000308466 ZNF330Q9Y3S2 320 aaPredicted RBP13.08□□□□□ -0.32
MUC4-201ENST00000308466 PPRC1Q5VV67 1664 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms