RNA–Protein interactions for RNA: ENST00000307635.3

ZNF556-201, Transcript of zinc finger protein 556, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF556, Length 6,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-201ENST00000307635 TPM4P67936 248 aa12.84□□□□□ -0.35
ZNF556-201ENST00000307635 PRKRIP1Q9H875 184 aaPredicted RBP12.84□□□□□ -0.35
ZNF556-201ENST00000307635 PPP2R1AP30153 589 aa12.84□□□□□ -0.35
ZNF556-201ENST00000307635 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
ZNF556-201ENST00000307635 NAIPQ13075 1403 aa12.84□□□□□ -0.35
ZNF556-201ENST00000307635 ZNF622Q969S3 477 aaKnown RBP eCLIP12.84□□□□□ -0.35
ZNF556-201ENST00000307635 ZKSCAN1P17029 563 aaPredicted RBP12.84□□□□□ -0.35
ZNF556-201ENST00000307635 WWC2Q6AWC2 1192 aa12.84□□□□□ -0.35
ZNF556-201ENST00000307635 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
ZNF556-201ENST00000307635 FCHSD2O94868 740 aa12.83□□□□□ -0.36
ZNF556-201ENST00000307635 ZSCAN29Q8IWY8 852 aaPredicted RBP12.83□□□□□ -0.36
ZNF556-201ENST00000307635 SCAF11Q99590 1463 aaKnown RBP12.83□□□□□ -0.36
ZNF556-201ENST00000307635 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
ZNF556-201ENST00000307635 ZSCAN25Q6NSZ9 544 aa12.83□□□□□ -0.36
ZNF556-201ENST00000307635 TFCP2L1Q9NZI6 479 aa12.83□□□□□ -0.36
ZNF556-201ENST00000307635 ANKIB1Q9P2G1 1089 aa12.83□□□□□ -0.36
ZNF556-201ENST00000307635 TWISTNBQ3B726 338 aaPredicted RBP12.82□□□□□ -0.36
ZNF556-201ENST00000307635 NME9Q86XW9 330 aa12.82□□□□□ -0.36
ZNF556-201ENST00000307635 ARHGEF10O15013 1369 aa12.82□□□□□ -0.36
ZNF556-201ENST00000307635 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
ZNF556-201ENST00000307635 MAGI2Q86UL8 1455 aa12.82□□□□□ -0.36
ZNF556-201ENST00000307635 RALYLQ86SE5 291 aaKnown RBP12.82□□□□□ -0.36
ZNF556-201ENST00000307635 BRD4O60885 1362 aaPredicted RBP12.82□□□□□ -0.36
ZNF556-201ENST00000307635 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
ZNF556-201ENST00000307635 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
ZNF556-201ENST00000307635 H3BQV1 296 aa12.81□□□□□ -0.36
ZNF556-201ENST00000307635 IL2RBP14784 551 aa12.81□□□□□ -0.36
ZNF556-201ENST00000307635 CCT4P50991 539 aaKnown RBP12.81□□□□□ -0.36
ZNF556-201ENST00000307635 IFFO2Q5TF58 517 aa12.81□□□□□ -0.36
ZNF556-201ENST00000307635 ST18O60284 1047 aa12.81□□□□□ -0.36
ZNF556-201ENST00000307635 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
ZNF556-201ENST00000307635 PTMSP20962 102 aa12.81□□□□□ -0.36
ZNF556-201ENST00000307635 SLF2Q8IX21 1173 aa12.81□□□□□ -0.36
ZNF556-201ENST00000307635 NSD2O96028 1365 aa12.81□□□□□ -0.36
ZNF556-201ENST00000307635 DISP1Q96F81 1524 aa12.81□□□□□ -0.36
ZNF556-201ENST00000307635 CCDC47Q96A33 483 aaKnown RBP12.81□□□□□ -0.36
ZNF556-201ENST00000307635 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
ZNF556-201ENST00000307635 CPLX1O14810 134 aa12.8□□□□□ -0.36
ZNF556-201ENST00000307635 CAVIN4Q5BKX8 364 aa12.8□□□□□ -0.36
ZNF556-201ENST00000307635 ERICH6BQ5W0A0 696 aa12.8□□□□□ -0.36
ZNF556-201ENST00000307635 CLASRPQ8N2M8 674 aaKnown RBP12.8□□□□□ -0.36
ZNF556-201ENST00000307635 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
ZNF556-201ENST00000307635 ACSBG1Q96GR2 724 aa12.8□□□□□ -0.36
ZNF556-201ENST00000307635 SRCIN1Q9C0H9 1055 aa12.8□□□□□ -0.36
ZNF556-201ENST00000307635 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
ZNF556-201ENST00000307635 TCP11L2Q8N4U5 519 aa12.79□□□□□ -0.36
ZNF556-201ENST00000307635 SLAIN2Q9P270 581 aa12.79□□□□□ -0.36
ZNF556-201ENST00000307635 MYO5CQ9NQX4 1742 aa12.79□□□□□ -0.36
ZNF556-201ENST00000307635 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
ZNF556-201ENST00000307635 BRMS1Q9HCU9 246 aa12.79□□□□□ -0.36
ZNF556-201ENST00000307635 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
ZNF556-201ENST00000307635 SF3A1Q15459 793 aaKnown RBP12.79□□□□□ -0.36
ZNF556-201ENST00000307635 HIP1O00291 1037 aa12.79□□□□□ -0.36
ZNF556-201ENST00000307635 NACAP1Q9BZK3 213 aa12.79□□□□□ -0.36
ZNF556-201ENST00000307635 DDX46Q7L014 1031 aaKnown RBP12.79□□□□□ -0.36
ZNF556-201ENST00000307635 TRIM44Q96DX7 344 aaPredicted RBP12.79□□□□□ -0.36
ZNF556-201ENST00000307635 ANO2Q9NQ90 1003 aa12.79□□□□□ -0.36
ZNF556-201ENST00000307635 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
ZNF556-201ENST00000307635 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
ZNF556-201ENST00000307635 RXRBP28702 533 aa12.78□□□□□ -0.36
ZNF556-201ENST00000307635 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
ZNF556-201ENST00000307635 MAPKBP1O60336 1514 aa12.78□□□□□ -0.36
ZNF556-201ENST00000307635 MYO1BO43795 1136 aa12.78□□□□□ -0.36
ZNF556-201ENST00000307635 BTG4Q9NY30 223 aa12.78□□□□□ -0.36
ZNF556-201ENST00000307635 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
ZNF556-201ENST00000307635 AAMPQ13685 434 aa12.78□□□□□ -0.36
ZNF556-201ENST00000307635 GNAI2P04899 355 aa12.77□□□□□ -0.36
ZNF556-201ENST00000307635 XBP1P17861 261 aa12.77□□□□□ -0.36
ZNF556-201ENST00000307635 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.37
ZNF556-201ENST00000307635 ATP2B2Q01814 1243 aa12.77□□□□□ -0.37
ZNF556-201ENST00000307635 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
ZNF556-201ENST00000307635 CNTROBQ8N137 903 aa12.77□□□□□ -0.37
ZNF556-201ENST00000307635 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.37
ZNF556-201ENST00000307635 NYXQ9GZU5 481 aa12.76□□□□□ -0.37
ZNF556-201ENST00000307635 NPHP4O75161 1426 aaPredicted RBP12.76□□□□□ -0.37
ZNF556-201ENST00000307635 LMOD1P29536 600 aaPredicted RBP12.76□□□□□ -0.37
ZNF556-201ENST00000307635 SLC4A3P48751 1232 aa12.76□□□□□ -0.37
ZNF556-201ENST00000307635 TRMT112Q9UI30 125 aaKnown RBP12.76□□□□□ -0.37
ZNF556-201ENST00000307635 TPM2P07951 284 aa12.76□□□□□ -0.37
ZNF556-201ENST00000307635 NBPF6Q5VWK0 638 aa12.76□□□□□ -0.37
ZNF556-201ENST00000307635 NBPF5PQ86XG9 351 aaPredicted RBP12.76□□□□□ -0.37
ZNF556-201ENST00000307635 NBPF4Q96M43 638 aa12.76□□□□□ -0.37
ZNF556-201ENST00000307635 DNAJC2Q99543 621 aaKnown RBP12.76□□□□□ -0.37
ZNF556-201ENST00000307635 TRPC5Q9UL62 973 aaPredicted RBP12.76□□□□□ -0.37
ZNF556-201ENST00000307635 REC8O95072 547 aa12.76□□□□□ -0.37
ZNF556-201ENST00000307635 NF2P35240 595 aa12.76□□□□□ -0.37
ZNF556-201ENST00000307635 SETDB2Q96T68 719 aa12.76□□□□□ -0.37
ZNF556-201ENST00000307635 HDAC9Q9UKV0 1011 aa12.76□□□□□ -0.37
ZNF556-201ENST00000307635 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
ZNF556-201ENST00000307635 IFIT1P09914 478 aaKnown RBP12.75□□□□□ -0.37
ZNF556-201ENST00000307635 FSD1Q9BTV5 496 aa12.75□□□□□ -0.37
ZNF556-201ENST00000307635 CEP126Q9P2H0 1117 aa12.75□□□□□ -0.37
ZNF556-201ENST00000307635 SAFBQ15424 915 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZNF556-201ENST00000307635 AKAP2Q9Y2D5 859 aa12.75□□□□□ -0.37
ZNF556-201ENST00000307635 SURF6O75683 361 aaKnown RBP12.75□□□□□ -0.37
ZNF556-201ENST00000307635 HOMEZQ8IX15 550 aa12.75□□□□□ -0.37
ZNF556-201ENST00000307635 ZNF287Q9HBT7 754 aa12.75□□□□□ -0.37
ZNF556-201ENST00000307635 PRM3Q9NNZ6 103 aa12.75□□□□□ -0.37
ZNF556-201ENST00000307635 CEP89Q96ST8 783 aa12.74□□□□□ -0.37
ZNF556-201ENST00000307635 RAI14Q9P0K7 980 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms