RNA–Protein interactions for RNA: ENST00000306006.10

ZNF239-201, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-201ENST00000306006 ABTB2Q8N961 1025 aa12.3□□□□□ -0.44
ZNF239-201ENST00000306006 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
ZNF239-201ENST00000306006 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
ZNF239-201ENST00000306006 SULT6B1Q6IMI4 303 aa12.29□□□□□ -0.44
ZNF239-201ENST00000306006 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
ZNF239-201ENST00000306006 HSPA2P54652 639 aa12.29□□□□□ -0.44
ZNF239-201ENST00000306006 ORAI2Q96SN7 254 aa12.29□□□□□ -0.44
ZNF239-201ENST00000306006 FLT4P35916 1363 aa12.29□□□□□ -0.44
ZNF239-201ENST00000306006 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
ZNF239-201ENST00000306006 EXOSC9Q06265 439 aaKnown RBP12.28□□□□□ -0.44
ZNF239-201ENST00000306006 AMPHP49418 695 aa12.28□□□□□ -0.44
ZNF239-201ENST00000306006 PSME1Q06323 249 aa12.28□□□□□ -0.44
ZNF239-201ENST00000306006 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.44
ZNF239-201ENST00000306006 BCL2L13Q9BXK5 485 aa12.27□□□□□ -0.44
ZNF239-201ENST00000306006 DLG5Q8TDM6 1919 aa12.27□□□□□ -0.45
ZNF239-201ENST00000306006 CT47B1P0C2W7 299 aaPredicted RBP12.27□□□□□ -0.45
ZNF239-201ENST00000306006 FRAT1Q92837 279 aaPredicted RBP12.27□□□□□ -0.45
ZNF239-201ENST00000306006 KDM4FA0A1W2PPD8 638 aa12.26□□□□□ -0.45
ZNF239-201ENST00000306006 CANXP27824 592 aaKnown RBP12.26□□□□□ -0.45
ZNF239-201ENST00000306006 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
ZNF239-201ENST00000306006 C19orf44Q9H6X5 657 aa12.26□□□□□ -0.45
ZNF239-201ENST00000306006 STRCP1A6NGW2 1772 aa12.26□□□□□ -0.45
ZNF239-201ENST00000306006 ARHGEF10O15013 1369 aa12.25□□□□□ -0.45
ZNF239-201ENST00000306006 FOXO3O43524 673 aa12.25□□□□□ -0.45
ZNF239-201ENST00000306006 PANK1Q8TE04 598 aa12.25□□□□□ -0.45
ZNF239-201ENST00000306006 LAS1LQ9Y4W2 734 aaKnown RBP12.25□□□□□ -0.45
ZNF239-201ENST00000306006 HOXC9P31274 260 aa12.25□□□□□ -0.45
ZNF239-201ENST00000306006 TMEM94Q12767 1356 aa12.24□□□□□ -0.45
ZNF239-201ENST00000306006 KIF24Q5T7B8 1368 aa12.24□□□□□ -0.45
ZNF239-201ENST00000306006 FAM83GA6ND36 823 aa12.24□□□□□ -0.45
ZNF239-201ENST00000306006 PRKCSHP14314 528 aaPredicted RBP12.24□□□□□ -0.45
ZNF239-201ENST00000306006 XPCQ01831 940 aaPredicted RBP12.24□□□□□ -0.45
ZNF239-201ENST00000306006 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
ZNF239-201ENST00000306006 LMOD3Q0VAK6 560 aa12.24□□□□□ -0.45
ZNF239-201ENST00000306006 EYA1Q99502 592 aa12.24□□□□□ -0.45
ZNF239-201ENST00000306006 C1orf167Q5SNV9 1468 aa12.24□□□□□ -0.45
ZNF239-201ENST00000306006 TNNQ9UQP3 1299 aa12.23□□□□□ -0.45
ZNF239-201ENST00000306006 RBM19Q9Y4C8 960 aaKnown RBP12.23□□□□□ -0.45
ZNF239-201ENST00000306006 ZNF853P0CG23 659 aa12.23□□□□□ -0.45
ZNF239-201ENST00000306006 DCTN1Q14203 1278 aa12.23□□□□□ -0.45
ZNF239-201ENST00000306006 IFT57Q9NWB7 429 aa12.23□□□□□ -0.45
ZNF239-201ENST00000306006 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
ZNF239-201ENST00000306006 GNAI1P63096 354 aa12.22□□□□□ -0.45
ZNF239-201ENST00000306006 SSH1Q8WYL5 1049 aa12.22□□□□□ -0.45
ZNF239-201ENST00000306006 COG6Q9Y2V7 657 aa12.22□□□□□ -0.45
ZNF239-201ENST00000306006 NFAT5O94916 1531 aa12.22□□□□□ -0.45
ZNF239-201ENST00000306006 KDRP35968 1356 aa12.22□□□□□ -0.45
ZNF239-201ENST00000306006 RLBP1P12271 317 aa12.22□□□□□ -0.45
ZNF239-201ENST00000306006 SMC4Q9NTJ3 1288 aa12.22□□□□□ -0.45
ZNF239-201ENST00000306006 LMTK3Q96Q04 1460 aa12.21□□□□□ -0.45
ZNF239-201ENST00000306006 MBIPQ9NS73 344 aa12.21□□□□□ -0.45
ZNF239-201ENST00000306006 LTN1O94822 1766 aa12.21□□□□□ -0.46
ZNF239-201ENST00000306006 CFAP44Q96MT7 982 aa12.21□□□□□ -0.46
ZNF239-201ENST00000306006 KDM2BQ8NHM5 1336 aa12.21□□□□□ -0.46
ZNF239-201ENST00000306006 ATF3P18847 181 aa12.2□□□□□ -0.46
ZNF239-201ENST00000306006 KRT28Q7Z3Y7 464 aa12.2□□□□□ -0.46
ZNF239-201ENST00000306006 RTL1A6NKG5 1358 aa12.2□□□□□ -0.46
ZNF239-201ENST00000306006 MST1RQ04912 1400 aa12.2□□□□□ -0.46
ZNF239-201ENST00000306006 KIF1AQ12756 1690 aa12.2□□□□□ -0.46
ZNF239-201ENST00000306006 TRPM3Q9HCF6 1732 aaPredicted RBP12.2□□□□□ -0.46
ZNF239-201ENST00000306006 ZKSCAN2Q63HK3 967 aa12.2□□□□□ -0.46
ZNF239-201ENST00000306006 KCNH5Q8NCM2 988 aa12.2□□□□□ -0.46
ZNF239-201ENST00000306006 CLUAP1Q96AJ1 413 aa12.2□□□□□ -0.46
ZNF239-201ENST00000306006 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
ZNF239-201ENST00000306006 NCOA3Q9Y6Q9 1424 aa12.2□□□□□ -0.46
ZNF239-201ENST00000306006 MTHFSDQ2M296 383 aaKnown RBP12.19□□□□□ -0.46
ZNF239-201ENST00000306006 IP6K1Q92551 441 aa12.19□□□□□ -0.46
ZNF239-201ENST00000306006 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
ZNF239-201ENST00000306006 MCM10Q7L590 875 aa12.19□□□□□ -0.46
ZNF239-201ENST00000306006 TSPYL6Q8N831 410 aa12.19□□□□□ -0.46
ZNF239-201ENST00000306006 DCCP43146 1447 aa12.19□□□□□ -0.46
ZNF239-201ENST00000306006 STRCQ7RTU9 1775 aa12.19□□□□□ -0.46
ZNF239-201ENST00000306006 VAMP4O75379 141 aa12.18□□□□□ -0.46
ZNF239-201ENST00000306006 ALDH1L2Q3SY69 923 aa12.18□□□□□ -0.46
ZNF239-201ENST00000306006 CENPQQ7L2Z9 268 aaPredicted RBP12.18□□□□□ -0.46
ZNF239-201ENST00000306006 PLEKHG5O94827 1062 aa12.18□□□□□ -0.46
ZNF239-201ENST00000306006 GCP02774 474 aa12.18□□□□□ -0.46
ZNF239-201ENST00000306006 NOB1Q9ULX3 412 aaKnown RBP12.18□□□□□ -0.46
ZNF239-201ENST00000306006 SLIT3O75094 1523 aa12.17□□□□□ -0.46
ZNF239-201ENST00000306006 ZBTB7CA1YPR0 619 aa12.17□□□□□ -0.46
ZNF239-201ENST00000306006 TRIM27P14373 513 aa12.17□□□□□ -0.46
ZNF239-201ENST00000306006 SKAP1Q86WV1 359 aa12.17□□□□□ -0.46
ZNF239-201ENST00000306006 DZIP1LQ8IYY4 767 aaKnown RBP12.17□□□□□ -0.46
ZNF239-201ENST00000306006 ELL2O00472 640 aaPredicted RBP12.16□□□□□ -0.46
ZNF239-201ENST00000306006 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
ZNF239-201ENST00000306006 DDX17Q92841 729 aaKnown RBP12.16□□□□□ -0.46
ZNF239-201ENST00000306006 ZNF428Q96B54 188 aa12.16□□□□□ -0.46
ZNF239-201ENST00000306006 USP19O94966 1318 aa12.16□□□□□ -0.46
ZNF239-201ENST00000306006 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
ZNF239-201ENST00000306006 CADPS2Q86UW7 1296 aa12.16□□□□□ -0.46
ZNF239-201ENST00000306006 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
ZNF239-201ENST00000306006 PHRF1Q9P1Y6 1649 aaKnown RBP12.16□□□□□ -0.46
ZNF239-201ENST00000306006 CHL1O00533 1208 aa12.15□□□□□ -0.46
ZNF239-201ENST00000306006 MVPQ14764 893 aaKnown RBP12.15□□□□□ -0.46
ZNF239-201ENST00000306006 TWISTNBQ3B726 338 aaPredicted RBP12.15□□□□□ -0.46
ZNF239-201ENST00000306006 ARHGEF25Q86VW2 580 aa12.15□□□□□ -0.46
ZNF239-201ENST00000306006 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
ZNF239-201ENST00000306006 GAS2L2Q8NHY3 880 aa12.15□□□□□ -0.46
ZNF239-201ENST00000306006 CRB1P82279 1406 aa12.15□□□□□ -0.46
ZNF239-201ENST00000306006 XIRP1Q702N8 1843 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms