RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 CHMP5Q9NZZ3 219 aa9.95□□□□□ -0.82
NKRF-201ENST00000304449 ZHX1Q9UKY1 873 aaPredicted RBP9.95□□□□□ -0.82
NKRF-201ENST00000304449 SPATA31D1Q6ZQQ2 1576 aa9.95□□□□□ -0.82
NKRF-201ENST00000304449 NCLP19338 710 aaKnown RBP9.94□□□□□ -0.82
NKRF-201ENST00000304449 PRAM1Q96QH2 718 aa9.94□□□□□ -0.82
NKRF-201ENST00000304449 KIF2CQ99661 725 aa9.94□□□□□ -0.82
NKRF-201ENST00000304449 C3P01024 1663 aa9.94□□□□□ -0.82
NKRF-201ENST00000304449 FCHSD2O94868 740 aa9.94□□□□□ -0.82
NKRF-201ENST00000304449 ZNF853P0CG23 659 aa9.94□□□□□ -0.82
NKRF-201ENST00000304449 C22orf23Q9BZE7 217 aa9.94□□□□□ -0.82
NKRF-201ENST00000304449 AKAP12Q02952 1782 aa9.94□□□□□ -0.82
NKRF-201ENST00000304449 NRKQ7Z2Y5 1582 aa9.94□□□□□ -0.82
NKRF-201ENST00000304449 MSNP26038 577 aaKnown RBP9.94□□□□□ -0.82
NKRF-201ENST00000304449 ZBTB7BO15156 539 aaPredicted RBP9.93□□□□□ -0.82
NKRF-201ENST00000304449 RIPK4P57078 832 aa9.93□□□□□ -0.82
NKRF-201ENST00000304449 ANP32BQ92688 251 aaKnown RBP9.93□□□□□ -0.82
NKRF-201ENST00000304449 POLKQ9UBT6 870 aa9.93□□□□□ -0.82
NKRF-201ENST00000304449 A2ML1A8K2U0 1454 aa9.93□□□□□ -0.82
NKRF-201ENST00000304449 ADRA2BP18089 450 aa9.93□□□□□ -0.82
NKRF-201ENST00000304449 HSCBQ8IWL3 235 aa9.93□□□□□ -0.82
NKRF-201ENST00000304449 FTSJ3Q8IY81 847 aaKnown RBP9.93□□□□□ -0.82
NKRF-201ENST00000304449 AGLP35573 1532 aa9.92□□□□□ -0.82
NKRF-201ENST00000304449 KIF16BQ96L93 1317 aa9.92□□□□□ -0.82
NKRF-201ENST00000304449 DIAPH1O60610 1272 aaKnown RBP9.92□□□□□ -0.82
NKRF-201ENST00000304449 SNX21Q969T3 373 aa9.92□□□□□ -0.82
NKRF-201ENST00000304449 TERF2IPQ9NYB0 399 aa9.92□□□□□ -0.82
NKRF-201ENST00000304449 CDK12Q9NYV4 1490 aaPredicted RBP9.92□□□□□ -0.82
NKRF-201ENST00000304449 TPM2P07951 284 aa9.92□□□□□ -0.82
NKRF-201ENST00000304449 SAFB2Q14151 953 aaKnown RBP eCLIP9.92□□□□□ -0.82
NKRF-201ENST00000304449 ZNF428Q96B54 188 aa9.92□□□□□ -0.82
NKRF-201ENST00000304449 VAMP4O75379 141 aa9.92□□□□□ -0.82
NKRF-201ENST00000304449 SIRT2Q8IXJ6 389 aa9.92□□□□□ -0.82
NKRF-201ENST00000304449 ARHGAP45Q92619 1136 aa9.92□□□□□ -0.82
NKRF-201ENST00000304449 CDK19Q9BWU1 502 aa9.92□□□□□ -0.82
NKRF-201ENST00000304449 SRPK2P78362 688 aaKnown RBP9.91□□□□□ -0.82
NKRF-201ENST00000304449 MRPL50Q8N5N7 158 aaKnown RBP9.91□□□□□ -0.82
NKRF-201ENST00000304449 AATKQ6ZMQ8 1374 aa9.91□□□□□ -0.82
NKRF-201ENST00000304449 ABCC4O15439 1325 aa9.91□□□□□ -0.82
NKRF-201ENST00000304449 MINK1Q8N4C8 1332 aaPredicted RBP9.91□□□□□ -0.82
NKRF-201ENST00000304449 U2SURPO15042 1029 aaKnown RBP9.91□□□□□ -0.82
NKRF-201ENST00000304449 ITPRIPQ8IWB1 547 aa9.91□□□□□ -0.82
NKRF-201ENST00000304449 PHACTR3Q96KR7 559 aa9.91□□□□□ -0.82
NKRF-201ENST00000304449 RGPD1P0DJD0 1748 aa9.9□□□□□ -0.82
NKRF-201ENST00000304449 HSP90AB1P08238 724 aaKnown RBP9.9□□□□□ -0.82
NKRF-201ENST00000304449 CABP1Q9NZU7 370 aa9.9□□□□□ -0.82
NKRF-201ENST00000304449 STK26Q9P289 416 aa9.9□□□□□ -0.82
NKRF-201ENST00000304449 CPS1P31327 1500 aa9.9□□□□□ -0.82
NKRF-201ENST00000304449 IL13P35225 146 aa9.9□□□□□ -0.82
NKRF-201ENST00000304449 DDX11L8A8MPP1 907 aa9.9□□□□□ -0.83
NKRF-201ENST00000304449 XPCQ01831 940 aaPredicted RBP9.9□□□□□ -0.83
NKRF-201ENST00000304449 BMP2KLQ5H9B9 411 aa9.9□□□□□ -0.83
NKRF-201ENST00000304449 NPM1P06748 294 aaKnown RBP eCLIP9.89□□□□□ -0.83
NKRF-201ENST00000304449 NASPP49321 788 aaPredicted RBP9.89□□□□□ -0.83
NKRF-201ENST00000304449 CHD1LQ86WJ1 897 aa9.89□□□□□ -0.83
NKRF-201ENST00000304449 RGS12O14924 1447 aa9.89□□□□□ -0.83
NKRF-201ENST00000304449 EDC4Q6P2E9 1401 aaKnown RBP9.89□□□□□ -0.83
NKRF-201ENST00000304449 FBLN1P23142 703 aa9.89□□□□□ -0.83
NKRF-201ENST00000304449 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
NKRF-201ENST00000304449 TSPYL6Q8N831 410 aa9.88□□□□□ -0.83
NKRF-201ENST00000304449 TNPO1Q92973 898 aaKnown RBP9.88□□□□□ -0.83
NKRF-201ENST00000304449 NALCNQ8IZF0 1738 aa9.88□□□□□ -0.83
NKRF-201ENST00000304449 TOPAZ1Q8N9V7 1692 aa9.88□□□□□ -0.83
NKRF-201ENST00000304449 NFE2L2Q16236 605 aa9.88□□□□□ -0.83
NKRF-201ENST00000304449 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
NKRF-201ENST00000304449 TECPR2O15040 1411 aa9.88□□□□□ -0.83
NKRF-201ENST00000304449 KIF24Q5T7B8 1368 aa9.88□□□□□ -0.83
NKRF-201ENST00000304449 IPO8O15397 1037 aaKnown RBP9.88□□□□□ -0.83
NKRF-201ENST00000304449 PRKAR2BP31323 418 aa9.88□□□□□ -0.83
NKRF-201ENST00000304449 MPNDQ8N594 471 aa9.88□□□□□ -0.83
NKRF-201ENST00000304449 IFT57Q9NWB7 429 aa9.87□□□□□ -0.83
NKRF-201ENST00000304449 TUBGCP6Q96RT7 1819 aa9.87□□□□□ -0.83
NKRF-201ENST00000304449 HDGFL2Q7Z4V5 671 aaPredicted RBP9.87□□□□□ -0.83
NKRF-201ENST00000304449 CD2BP2O95400 341 aaKnown RBP9.87□□□□□ -0.83
NKRF-201ENST00000304449 PRDM4Q9UKN5 801 aa9.87□□□□□ -0.83
NKRF-201ENST00000304449 DDX49Q9Y6V7 483 aaKnown RBP9.87□□□□□ -0.83
NKRF-201ENST00000304449 PEAK1Q9H792 1746 aa9.86□□□□□ -0.83
NKRF-201ENST00000304449 UQCRHLA0A096LP55 91 aa9.86□□□□□ -0.83
NKRF-201ENST00000304449 UQCRHP07919 91 aa9.86□□□□□ -0.83
NKRF-201ENST00000304449 CALD1Q05682 793 aaKnown RBP9.86□□□□□ -0.83
NKRF-201ENST00000304449 ZSCAN30Q86W11 494 aa9.86□□□□□ -0.83
NKRF-201ENST00000304449 GCC1Q96CN9 775 aa9.86□□□□□ -0.83
NKRF-201ENST00000304449 MBIPQ9NS73 344 aa9.86□□□□□ -0.83
NKRF-201ENST00000304449 ITSN1Q15811 1721 aa9.86□□□□□ -0.83
NKRF-201ENST00000304449 DIP2BQ9P265 1576 aa9.86□□□□□ -0.83
NKRF-201ENST00000304449 CLEC17AQ6ZS10 378 aa9.86□□□□□ -0.83
NKRF-201ENST00000304449 GBP4Q96PP9 640 aa9.86□□□□□ -0.83
NKRF-201ENST00000304449 ATP10DQ9P241 1426 aa9.85□□□□□ -0.83
NKRF-201ENST00000304449 LNPKQ9C0E8 428 aa9.85□□□□□ -0.83
NKRF-201ENST00000304449 TPRNQ4KMQ1 711 aa9.85□□□□□ -0.83
NKRF-201ENST00000304449 WAPLQ7Z5K2 1190 aa9.85□□□□□ -0.83
NKRF-201ENST00000304449 RIMS2Q9UQ26 1411 aa9.85□□□□□ -0.83
NKRF-201ENST00000304449 RAB3GAP1Q15042 981 aa9.85□□□□□ -0.83
NKRF-201ENST00000304449 SENP3Q9H4L4 574 aaPredicted RBP9.85□□□□□ -0.83
NKRF-201ENST00000304449 EMILIN1Q9Y6C2 1016 aa9.85□□□□□ -0.83
NKRF-201ENST00000304449 THUMPD2Q9BTF0 503 aaKnown RBP9.84□□□□□ -0.83
NKRF-201ENST00000304449 METP08581 1390 aa9.84□□□□□ -0.83
NKRF-201ENST00000304449 DNTTIP2Q5QJE6 756 aaKnown RBP9.84□□□□□ -0.83
NKRF-201ENST00000304449 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.84□□□□□ -0.83
NKRF-201ENST00000304449 C8orf58Q8NAV2 365 aa9.84□□□□□ -0.83
NKRF-201ENST00000304449 CFAP44Q96MT7 982 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms