RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ARHGEF10O15013 1369 aa13.76□□□□□ -0.21
CLP1-201ENST00000302731 KDM4FA0A1W2PPD8 638 aa13.75□□□□□ -0.21
CLP1-201ENST00000302731 PLIN1O60240 522 aa13.75□□□□□ -0.21
CLP1-201ENST00000302731 RBM33Q96EV2 1170 aaKnown RBP13.75□□□□□ -0.21
CLP1-201ENST00000302731 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
CLP1-201ENST00000302731 C1orf167Q5SNV9 1468 aa13.75□□□□□ -0.21
CLP1-201ENST00000302731 LMTK3Q96Q04 1460 aa13.75□□□□□ -0.21
CLP1-201ENST00000302731 PSME1Q06323 249 aa13.75□□□□□ -0.21
CLP1-201ENST00000302731 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
CLP1-201ENST00000302731 PHACTR3Q96KR7 559 aa13.75□□□□□ -0.21
CLP1-201ENST00000302731 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
CLP1-201ENST00000302731 MST1RQ04912 1400 aa13.74□□□□□ -0.21
CLP1-201ENST00000302731 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
CLP1-201ENST00000302731 AMPHP49418 695 aa13.73□□□□□ -0.21
CLP1-201ENST00000302731 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
CLP1-201ENST00000302731 PDE3AQ14432 1141 aa13.73□□□□□ -0.21
CLP1-201ENST00000302731 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
CLP1-201ENST00000302731 KDRP35968 1356 aa13.73□□□□□ -0.21
CLP1-201ENST00000302731 TMEM94Q12767 1356 aa13.73□□□□□ -0.21
CLP1-201ENST00000302731 KCNH5Q8NCM2 988 aa13.72□□□□□ -0.21
CLP1-201ENST00000302731 CRBNQ96SW2 442 aa13.72□□□□□ -0.21
CLP1-201ENST00000302731 PHRF1Q9P1Y6 1649 aaKnown RBP13.72□□□□□ -0.21
CLP1-201ENST00000302731 BCAR3O75815 825 aa13.72□□□□□ -0.21
CLP1-201ENST00000302731 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
CLP1-201ENST00000302731 IGSF1Q8N6C5 1336 aa13.71□□□□□ -0.21
CLP1-201ENST00000302731 NFAT5O94916 1531 aa13.71□□□□□ -0.21
CLP1-201ENST00000302731 ATF3P18847 181 aa13.71□□□□□ -0.22
CLP1-201ENST00000302731 HSPA2P54652 639 aa13.71□□□□□ -0.22
CLP1-201ENST00000302731 C20orf194Q5TEA3 1177 aa13.71□□□□□ -0.22
CLP1-201ENST00000302731 ZNF428Q96B54 188 aa13.71□□□□□ -0.22
CLP1-201ENST00000302731 ORAI2Q96SN7 254 aa13.71□□□□□ -0.22
CLP1-201ENST00000302731 IFT57Q9NWB7 429 aa13.71□□□□□ -0.22
CLP1-201ENST00000302731 SOX12O15370 315 aa13.7□□□□□ -0.22
CLP1-201ENST00000302731 HOXC9P31274 260 aa13.7□□□□□ -0.22
CLP1-201ENST00000302731 CADPS2Q86UW7 1296 aa13.7□□□□□ -0.22
CLP1-201ENST00000302731 TRPM3Q9HCF6 1732 aaPredicted RBP13.7□□□□□ -0.22
CLP1-201ENST00000302731 SLIT3O75094 1523 aa13.7□□□□□ -0.22
CLP1-201ENST00000302731 STRCQ7RTU9 1775 aa13.7□□□□□ -0.22
CLP1-201ENST00000302731 DLG5Q8TDM6 1919 aa13.69□□□□□ -0.22
CLP1-201ENST00000302731 GNAI1P63096 354 aa13.69□□□□□ -0.22
CLP1-201ENST00000302731 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
CLP1-201ENST00000302731 TSHZ2Q9NRE2 1034 aa13.69□□□□□ -0.22
CLP1-201ENST00000302731 FOXO3O43524 673 aa13.68□□□□□ -0.22
CLP1-201ENST00000302731 ZNF853P0CG23 659 aa13.68□□□□□ -0.22
CLP1-201ENST00000302731 AAMPQ13685 434 aa13.68□□□□□ -0.22
CLP1-201ENST00000302731 TSR2Q969E8 191 aaKnown RBP13.68□□□□□ -0.22
CLP1-201ENST00000302731 MSH6P52701 1360 aa13.68□□□□□ -0.22
CLP1-201ENST00000302731 EXOSC9Q06265 439 aaKnown RBP13.68□□□□□ -0.22
CLP1-201ENST00000302731 NUTM2GQ5VZR2 741 aa13.68□□□□□ -0.22
CLP1-201ENST00000302731 IP6K1Q92551 441 aa13.68□□□□□ -0.22
CLP1-201ENST00000302731 USP19O94966 1318 aa13.67□□□□□ -0.22
CLP1-201ENST00000302731 LTN1O94822 1766 aa13.67□□□□□ -0.22
CLP1-201ENST00000302731 KRT28Q7Z3Y7 464 aa13.67□□□□□ -0.22
CLP1-201ENST00000302731 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
CLP1-201ENST00000302731 EYA1Q99502 592 aa13.67□□□□□ -0.22
CLP1-201ENST00000302731 MS4A1P11836 297 aa13.66□□□□□ -0.22
CLP1-201ENST00000302731 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
CLP1-201ENST00000302731 ALS2Q96Q42 1657 aa13.65□□□□□ -0.22
CLP1-201ENST00000302731 CANXP27824 592 aaKnown RBP13.65□□□□□ -0.22
CLP1-201ENST00000302731 BRPF1P55201 1214 aaPredicted RBP13.65□□□□□ -0.22
CLP1-201ENST00000302731 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
CLP1-201ENST00000302731 HTATSF1O43719 755 aaKnown RBP13.64□□□□□ -0.23
CLP1-201ENST00000302731 GCP02774 474 aa13.64□□□□□ -0.23
CLP1-201ENST00000302731 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
CLP1-201ENST00000302731 XIRP1Q702N8 1843 aaKnown RBP13.63□□□□□ -0.23
CLP1-201ENST00000302731 ZKSCAN2Q63HK3 967 aa13.63□□□□□ -0.23
CLP1-201ENST00000302731 ARHGEF25Q86VW2 580 aa13.63□□□□□ -0.23
CLP1-201ENST00000302731 KIF16BQ96L93 1317 aa13.63□□□□□ -0.23
CLP1-201ENST00000302731 SSH1Q8WYL5 1049 aa13.62□□□□□ -0.23
CLP1-201ENST00000302731 FRAT1Q92837 279 aaPredicted RBP13.62□□□□□ -0.23
CLP1-201ENST00000302731 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
CLP1-201ENST00000302731 MBIPQ9NS73 344 aa13.62□□□□□ -0.23
CLP1-201ENST00000302731 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
CLP1-201ENST00000302731 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
CLP1-201ENST00000302731 CENPQQ7L2Z9 268 aaPredicted RBP13.61□□□□□ -0.23
CLP1-201ENST00000302731 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
CLP1-201ENST00000302731 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
CLP1-201ENST00000302731 IPO8O15397 1037 aaKnown RBP13.61□□□□□ -0.23
CLP1-201ENST00000302731 VAMP4O75379 141 aa13.61□□□□□ -0.23
CLP1-201ENST00000302731 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
CLP1-201ENST00000302731 MTHFSDQ2M296 383 aaKnown RBP13.61□□□□□ -0.23
CLP1-201ENST00000302731 LAS1LQ9Y4W2 734 aaKnown RBP13.61□□□□□ -0.23
CLP1-201ENST00000302731 CHL1O00533 1208 aa13.6□□□□□ -0.23
CLP1-201ENST00000302731 XPCQ01831 940 aaPredicted RBP13.6□□□□□ -0.23
CLP1-201ENST00000302731 PANK1Q8TE04 598 aa13.6□□□□□ -0.23
CLP1-201ENST00000302731 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
CLP1-201ENST00000302731 PXDNQ92626 1479 aa13.59□□□□□ -0.23
CLP1-201ENST00000302731 CRB1P82279 1406 aa13.59□□□□□ -0.23
CLP1-201ENST00000302731 TNS3Q68CZ2 1445 aa13.59□□□□□ -0.23
CLP1-201ENST00000302731 KIAA0232Q92628 1395 aa13.59□□□□□ -0.23
CLP1-201ENST00000302731 DZIP1LQ8IYY4 767 aaKnown RBP13.59□□□□□ -0.23
CLP1-201ENST00000302731 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
CLP1-201ENST00000302731 CLUAP1Q96AJ1 413 aa13.59□□□□□ -0.23
CLP1-201ENST00000302731 ABCC6O95255 1503 aa13.59□□□□□ -0.23
CLP1-201ENST00000302731 DCTN1Q14203 1278 aa13.58□□□□□ -0.24
CLP1-201ENST00000302731 ATF7IPQ6VMQ6 1270 aa13.58□□□□□ -0.24
CLP1-201ENST00000302731 ARHGAP45Q92619 1136 aa13.58□□□□□ -0.24
CLP1-201ENST00000302731 COG6Q9Y2V7 657 aa13.58□□□□□ -0.24
CLP1-201ENST00000302731 MED1Q15648 1581 aaPredicted RBP13.58□□□□□ -0.24
CLP1-201ENST00000302731 CAMTA1Q9Y6Y1 1673 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms