RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ZBTB40Q9NUA8 1239 aa16.12■□□□□ 0.17
CASC4-201ENST00000299957 CFAP65Q6ZU64 1925 aaKnown RBP16.12■□□□□ 0.17
CASC4-201ENST00000299957 RTEL1-TNFRSF6BF6WH68 1400 aa16.12■□□□□ 0.17
CASC4-201ENST00000299957 KDM5BQ9UGL1 1544 aa16.12■□□□□ 0.17
CASC4-201ENST00000299957 GPATCH3Q96I76 525 aa16.11■□□□□ 0.17
CASC4-201ENST00000299957 SRGAP3O43295 1099 aa16.11■□□□□ 0.17
CASC4-201ENST00000299957 FOXO3O43524 673 aa16.11■□□□□ 0.17
CASC4-201ENST00000299957 LRRCC1Q9C099 1032 aa16.11■□□□□ 0.17
CASC4-201ENST00000299957 GNL2Q13823 731 aaKnown RBP16.11■□□□□ 0.17
CASC4-201ENST00000299957 BMP2KLQ5H9B9 411 aa16.11■□□□□ 0.17
CASC4-201ENST00000299957 CCDC61Q9Y6R9 512 aa16.11■□□□□ 0.17
CASC4-201ENST00000299957 SAMD9Q5K651 1589 aa16.11■□□□□ 0.17
CASC4-201ENST00000299957 PHF14O94880 888 aa16.11■□□□□ 0.17
CASC4-201ENST00000299957 ZKSCAN1P17029 563 aaPredicted RBP16.1■□□□□ 0.17
CASC4-201ENST00000299957 SLC52A1Q9NWF4 448 aa16.1■□□□□ 0.17
CASC4-201ENST00000299957 POLKQ9UBT6 870 aa16.1■□□□□ 0.17
CASC4-201ENST00000299957 SDSP20132 328 aa16.1■□□□□ 0.17
CASC4-201ENST00000299957 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
CASC4-201ENST00000299957 NPHP1O15259 732 aa16.1■□□□□ 0.17
CASC4-201ENST00000299957 ADGRL1O94910 1474 aa16.1■□□□□ 0.17
CASC4-201ENST00000299957 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
CASC4-201ENST00000299957 HDAC1Q13547 482 aaPredicted RBP16.09■□□□□ 0.17
CASC4-201ENST00000299957 FAM184AQ8NB25 1140 aa16.09■□□□□ 0.17
CASC4-201ENST00000299957 BCORL1Q5H9F3 1711 aa16.09■□□□□ 0.17
CASC4-201ENST00000299957 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.09■□□□□ 0.17
CASC4-201ENST00000299957 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
CASC4-201ENST00000299957 ZNF830Q96NB3 372 aaPredicted RBP16.09■□□□□ 0.17
CASC4-201ENST00000299957 SPG7Q9UQ90 795 aa16.09■□□□□ 0.17
CASC4-201ENST00000299957 VAMP4O75379 141 aa16.08■□□□□ 0.17
CASC4-201ENST00000299957 C1orf141Q5JVX7 400 aa16.08■□□□□ 0.17
CASC4-201ENST00000299957 PSME1Q06323 249 aa16.08■□□□□ 0.16
CASC4-201ENST00000299957 STK11IPQ8N1F8 1099 aa16.08■□□□□ 0.16
CASC4-201ENST00000299957 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.16
CASC4-201ENST00000299957 NEUROD6Q96NK8 337 aa16.08■□□□□ 0.16
CASC4-201ENST00000299957 TOMM22Q9NS69 142 aa16.07■□□□□ 0.16
CASC4-201ENST00000299957 LRRFIP2Q9Y608 721 aaKnown RBP16.07■□□□□ 0.16
CASC4-201ENST00000299957 GNAI3P08754 354 aa16.07■□□□□ 0.16
CASC4-201ENST00000299957 SMC5Q8IY18 1101 aa16.07■□□□□ 0.16
CASC4-201ENST00000299957 TCEANC2Q96MN5 208 aa16.07■□□□□ 0.16
CASC4-201ENST00000299957 ADAMTS12P58397 1594 aa16.07■□□□□ 0.16
CASC4-201ENST00000299957 CEBPAP49715 358 aaPredicted RBP16.07■□□□□ 0.16
CASC4-201ENST00000299957 G3BP1Q13283 466 aaKnown RBP eCLIP16.07■□□□□ 0.16
CASC4-201ENST00000299957 CCDC30Q5VVM6 783 aa16.07■□□□□ 0.16
CASC4-201ENST00000299957 CIZ1Q9ULV3 898 aaPredicted RBP16.07■□□□□ 0.16
CASC4-201ENST00000299957 ALDH1L2Q3SY69 923 aa16.06■□□□□ 0.16
CASC4-201ENST00000299957 CLASRPQ8N2M8 674 aaKnown RBP16.06■□□□□ 0.16
CASC4-201ENST00000299957 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
CASC4-201ENST00000299957 PRDM10Q9NQV6 1147 aa16.06■□□□□ 0.16
CASC4-201ENST00000299957 POLR3AO14802 1390 aaPredicted RBP16.06■□□□□ 0.16
CASC4-201ENST00000299957 CAMK4Q16566 473 aa16.06■□□□□ 0.16
CASC4-201ENST00000299957 TSPY26PQ9H489 355 aa16.06■□□□□ 0.16
CASC4-201ENST00000299957 BLMP54132 1417 aaPredicted RBP16.06■□□□□ 0.16
CASC4-201ENST00000299957 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
CASC4-201ENST00000299957 ZNF521Q96K83 1311 aa16.06■□□□□ 0.16
CASC4-201ENST00000299957 BECN2A8MW95 431 aa16.05■□□□□ 0.16
CASC4-201ENST00000299957 IFT57Q9NWB7 429 aa16.05■□□□□ 0.16
CASC4-201ENST00000299957 ZSCAN30Q86W11 494 aa16.05■□□□□ 0.16
CASC4-201ENST00000299957 RPAP2Q8IXW5 612 aaPredicted RBP16.05■□□□□ 0.16
CASC4-201ENST00000299957 DNAJC2Q99543 621 aaKnown RBP16.05■□□□□ 0.16
CASC4-201ENST00000299957 FSD1Q9BTV5 496 aa16.05■□□□□ 0.16
CASC4-201ENST00000299957 ZMYM4Q5VZL5 1548 aa16.05■□□□□ 0.16
CASC4-201ENST00000299957 FANCAO15360 1455 aa16.05■□□□□ 0.16
CASC4-201ENST00000299957 CD2BP2O95400 341 aaKnown RBP16.05■□□□□ 0.16
CASC4-201ENST00000299957 MYL6BP14649 208 aa16.05■□□□□ 0.16
CASC4-201ENST00000299957 UQCRHLA0A096LP55 91 aa16.04■□□□□ 0.16
CASC4-201ENST00000299957 UQCRHP07919 91 aa16.04■□□□□ 0.16
CASC4-201ENST00000299957 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
CASC4-201ENST00000299957 USP25Q9UHP3 1055 aa16.04■□□□□ 0.16
CASC4-201ENST00000299957 PKP1Q13835 747 aa16.04■□□□□ 0.16
CASC4-201ENST00000299957 CCDC83Q8IWF9 413 aa16.04■□□□□ 0.16
CASC4-201ENST00000299957 MRPL50Q8N5N7 158 aaKnown RBP16.04■□□□□ 0.16
CASC4-201ENST00000299957 MX1P20591 662 aa16.04■□□□□ 0.16
CASC4-201ENST00000299957 RIC3Q7Z5B4 369 aa16.04■□□□□ 0.16
CASC4-201ENST00000299957 PIK3C2GO75747 1445 aa16.04■□□□□ 0.16
CASC4-201ENST00000299957 ARHGEF12Q9NZN5 1544 aa16.04■□□□□ 0.16
CASC4-201ENST00000299957 JAKMIP1Q96N16 626 aaKnown RBP16.03■□□□□ 0.16
CASC4-201ENST00000299957 ATP6V1DQ9Y5K8 247 aa16.03■□□□□ 0.16
CASC4-201ENST00000299957 A0A1W2PP64 1363 aa16.03■□□□□ 0.16
CASC4-201ENST00000299957 PRIM1P49642 420 aaKnown RBP16.03■□□□□ 0.16
CASC4-201ENST00000299957 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
CASC4-201ENST00000299957 GOLGA6L19H0YKK7 550 aa16.02■□□□□ 0.16
CASC4-201ENST00000299957 ZBTB7BO15156 539 aaPredicted RBP16.02■□□□□ 0.16
CASC4-201ENST00000299957 TTC22Q5TAA0 569 aa16.02■□□□□ 0.16
CASC4-201ENST00000299957 RUFY2Q8WXA3 655 aa16.02■□□□□ 0.16
CASC4-201ENST00000299957 KDM5CP41229 1560 aa16.02■□□□□ 0.16
CASC4-201ENST00000299957 GAS2L3Q86XJ1 694 aa16.02■□□□□ 0.16
CASC4-201ENST00000299957 NLRP2Q9NX02 1062 aa16.02■□□□□ 0.16
CASC4-201ENST00000299957 FAM177BA6PVY3 158 aa16.02■□□□□ 0.15
CASC4-201ENST00000299957 G2E3Q7L622 706 aa16.02■□□□□ 0.15
CASC4-201ENST00000299957 DDX11Q96FC9 970 aa16.02■□□□□ 0.15
CASC4-201ENST00000299957 SRCIN1Q9C0H9 1055 aa16.02■□□□□ 0.15
CASC4-201ENST00000299957 RPGRIP1LQ68CZ1 1315 aa16.02■□□□□ 0.15
CASC4-201ENST00000299957 CASTP20810 708 aaKnown RBP16.02■□□□□ 0.15
CASC4-201ENST00000299957 CCDC85AQ96PX6 553 aaPredicted RBP16.02■□□□□ 0.15
CASC4-201ENST00000299957 PLCH2O75038 1416 aa16.01■□□□□ 0.15
CASC4-201ENST00000299957 MBD3O95983 291 aa16.01■□□□□ 0.15
CASC4-201ENST00000299957 CPA1P15085 419 aa16.01■□□□□ 0.15
CASC4-201ENST00000299957 TAF7Q15545 349 aaPredicted RBP16.01■□□□□ 0.15
CASC4-201ENST00000299957 CNTROBQ8N137 903 aa16.01■□□□□ 0.15
CASC4-201ENST00000299957 USP19O94966 1318 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms