RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 PSME1Q06323 249 aa13.76□□□□□ -0.21
COPS2-201ENST00000299259 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
COPS2-201ENST00000299259 KIF24Q5T7B8 1368 aa13.76□□□□□ -0.21
COPS2-201ENST00000299259 TMPOP42166 694 aaKnown RBP13.75□□□□□ -0.21
COPS2-201ENST00000299259 WDR63Q8IWG1 891 aa13.75□□□□□ -0.21
COPS2-201ENST00000299259 HMOX1P09601 288 aa13.74□□□□□ -0.21
COPS2-201ENST00000299259 EIF4A2Q14240 407 aaKnown RBP13.74□□□□□ -0.21
COPS2-201ENST00000299259 NUTM2GQ5VZR2 741 aa13.74□□□□□ -0.21
COPS2-201ENST00000299259 SLIT3O75094 1523 aa13.74□□□□□ -0.21
COPS2-201ENST00000299259 RTL1A6NKG5 1358 aa13.74□□□□□ -0.21
COPS2-201ENST00000299259 ARHGEF10O15013 1369 aa13.73□□□□□ -0.21
COPS2-201ENST00000299259 FOXO3O43524 673 aa13.73□□□□□ -0.21
COPS2-201ENST00000299259 HSP90AB2PQ58FF8 381 aa13.73□□□□□ -0.21
COPS2-201ENST00000299259 CADPS2Q86UW7 1296 aa13.73□□□□□ -0.21
COPS2-201ENST00000299259 AMPHP49418 695 aa13.72□□□□□ -0.21
COPS2-201ENST00000299259 ZNF335Q9H4Z2 1342 aaPredicted RBP13.71□□□□□ -0.21
COPS2-201ENST00000299259 RIPK4P57078 832 aa13.71□□□□□ -0.22
COPS2-201ENST00000299259 XPCQ01831 940 aaPredicted RBP13.71□□□□□ -0.22
COPS2-201ENST00000299259 PPP4R2Q9NY27 417 aa13.71□□□□□ -0.22
COPS2-201ENST00000299259 TRIM35Q9UPQ4 493 aa13.71□□□□□ -0.22
COPS2-201ENST00000299259 MYH16Q9H6N6 1097 aa13.7□□□□□ -0.22
COPS2-201ENST00000299259 CRYBG1Q9Y4K1 1723 aa13.7□□□□□ -0.22
COPS2-201ENST00000299259 NFE2L2Q16236 605 aa13.69□□□□□ -0.22
COPS2-201ENST00000299259 PELP1Q8IZL8 1130 aaKnown RBP13.69□□□□□ -0.22
COPS2-201ENST00000299259 HOXC9P31274 260 aa13.69□□□□□ -0.22
COPS2-201ENST00000299259 KRT28Q7Z3Y7 464 aa13.69□□□□□ -0.22
COPS2-201ENST00000299259 PHACTR3Q96KR7 559 aa13.69□□□□□ -0.22
COPS2-201ENST00000299259 RGPD2P0DJD1 1756 aa13.69□□□□□ -0.22
COPS2-201ENST00000299259 SULT6B1Q6IMI4 303 aa13.68□□□□□ -0.22
COPS2-201ENST00000299259 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
COPS2-201ENST00000299259 KCNH5Q8NCM2 988 aa13.68□□□□□ -0.22
COPS2-201ENST00000299259 USP19O94966 1318 aa13.68□□□□□ -0.22
COPS2-201ENST00000299259 IL16Q14005 1332 aa13.68□□□□□ -0.22
COPS2-201ENST00000299259 KDRP35968 1356 aa13.68□□□□□ -0.22
COPS2-201ENST00000299259 PXDNQ92626 1479 aa13.68□□□□□ -0.22
COPS2-201ENST00000299259 IGSF1Q8N6C5 1336 aa13.67□□□□□ -0.22
COPS2-201ENST00000299259 MED1Q15648 1581 aaPredicted RBP13.67□□□□□ -0.22
COPS2-201ENST00000299259 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
COPS2-201ENST00000299259 FANCIQ9NVI1 1328 aa13.67□□□□□ -0.22
COPS2-201ENST00000299259 RGPD5Q99666 1765 aa13.67□□□□□ -0.22
COPS2-201ENST00000299259 LMOD3Q0VAK6 560 aa13.66□□□□□ -0.22
COPS2-201ENST00000299259 TNS3Q68CZ2 1445 aa13.66□□□□□ -0.22
COPS2-201ENST00000299259 LMOD2Q6P5Q4 547 aa13.65□□□□□ -0.22
COPS2-201ENST00000299259 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.65□□□□□ -0.22
COPS2-201ENST00000299259 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
COPS2-201ENST00000299259 NHSL1Q5SYE7 1610 aa13.64□□□□□ -0.23
COPS2-201ENST00000299259 PLIN1O60240 522 aa13.64□□□□□ -0.23
COPS2-201ENST00000299259 CALD1Q05682 793 aaKnown RBP13.64□□□□□ -0.23
COPS2-201ENST00000299259 TSR2Q969E8 191 aaKnown RBP13.64□□□□□ -0.23
COPS2-201ENST00000299259 IP6K1Q92551 441 aa13.63□□□□□ -0.23
COPS2-201ENST00000299259 EYA1Q99502 592 aa13.63□□□□□ -0.23
COPS2-201ENST00000299259 LRRC37A3O60309 1634 aa13.63□□□□□ -0.23
COPS2-201ENST00000299259 ABCA3Q99758 1704 aa13.63□□□□□ -0.23
COPS2-201ENST00000299259 GCP02774 474 aa13.63□□□□□ -0.23
COPS2-201ENST00000299259 FAM208AQ9UK61 1670 aaKnown RBP13.62□□□□□ -0.23
COPS2-201ENST00000299259 B4GALNT3Q6L9W6 998 aa13.62□□□□□ -0.23
COPS2-201ENST00000299259 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
COPS2-201ENST00000299259 ABCC6O95255 1503 aa13.61□□□□□ -0.23
COPS2-201ENST00000299259 CT47B1P0C2W7 299 aaPredicted RBP13.61□□□□□ -0.23
COPS2-201ENST00000299259 BRINP3Q76B58 766 aa13.61□□□□□ -0.23
COPS2-201ENST00000299259 EXOC6Q8TAG9 804 aa13.61□□□□□ -0.23
COPS2-201ENST00000299259 LTV1Q96GA3 475 aaPredicted RBP13.61□□□□□ -0.23
COPS2-201ENST00000299259 ZBTB7CA1YPR0 619 aa13.61□□□□□ -0.23
COPS2-201ENST00000299259 BCAR3O75815 825 aa13.61□□□□□ -0.23
COPS2-201ENST00000299259 ARHGEF25Q86VW2 580 aa13.61□□□□□ -0.23
COPS2-201ENST00000299259 THUMPD2Q9BTF0 503 aaKnown RBP13.61□□□□□ -0.23
COPS2-201ENST00000299259 VIRMAQ69YN4 1812 aaKnown RBP13.61□□□□□ -0.23
COPS2-201ENST00000299259 COL18A1P39060 1754 aa13.6□□□□□ -0.23
COPS2-201ENST00000299259 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
COPS2-201ENST00000299259 RARSP54136 660 aaKnown RBP13.59□□□□□ -0.23
COPS2-201ENST00000299259 EXOSC9Q06265 439 aaKnown RBP13.59□□□□□ -0.23
COPS2-201ENST00000299259 C20orf194Q5TEA3 1177 aa13.59□□□□□ -0.23
COPS2-201ENST00000299259 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
COPS2-201ENST00000299259 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
COPS2-201ENST00000299259 IFT57Q9NWB7 429 aa13.59□□□□□ -0.23
COPS2-201ENST00000299259 LMO7Q8WWI1 1683 aa13.59□□□□□ -0.23
COPS2-201ENST00000299259 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
COPS2-201ENST00000299259 GNAI1P63096 354 aa13.59□□□□□ -0.23
COPS2-201ENST00000299259 NCAPD2Q15021 1401 aa13.58□□□□□ -0.24
COPS2-201ENST00000299259 FAM83GA6ND36 823 aa13.58□□□□□ -0.24
COPS2-201ENST00000299259 SLAIN2Q9P270 581 aa13.58□□□□□ -0.24
COPS2-201ENST00000299259 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
COPS2-201ENST00000299259 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
COPS2-201ENST00000299259 LAS1LQ9Y4W2 734 aaKnown RBP13.57□□□□□ -0.24
COPS2-201ENST00000299259 MTHFSDQ2M296 383 aaKnown RBP13.56□□□□□ -0.24
COPS2-201ENST00000299259 ZNF853P0CG23 659 aa13.56□□□□□ -0.24
COPS2-201ENST00000299259 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
COPS2-201ENST00000299259 USHBP1Q8N6Y0 703 aa13.56□□□□□ -0.24
COPS2-201ENST00000299259 CFAP44Q96MT7 982 aa13.56□□□□□ -0.24
COPS2-201ENST00000299259 BCL2L13Q9BXK5 485 aa13.56□□□□□ -0.24
COPS2-201ENST00000299259 LTBP4Q8N2S1 1624 aa13.56□□□□□ -0.24
COPS2-201ENST00000299259 ROBO1Q9Y6N7 1651 aa13.55□□□□□ -0.24
COPS2-201ENST00000299259 SOS2Q07890 1332 aaPredicted RBP13.55□□□□□ -0.24
COPS2-201ENST00000299259 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
COPS2-201ENST00000299259 PDE3AQ14432 1141 aa13.54□□□□□ -0.24
COPS2-201ENST00000299259 NBPF6Q5VWK0 638 aa13.54□□□□□ -0.24
COPS2-201ENST00000299259 NBPF4Q96M43 638 aa13.54□□□□□ -0.24
COPS2-201ENST00000299259 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
COPS2-201ENST00000299259 CRB1P82279 1406 aa13.54□□□□□ -0.24
COPS2-201ENST00000299259 ZC3H6P61129 1189 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms