RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 MBIPQ9NS73 344 aa17.21■□□□□ 0.35
BCCIP-202ENST00000299130 EDC4Q6P2E9 1401 aaKnown RBP17.21■□□□□ 0.35
BCCIP-202ENST00000299130 REREQ9P2R6 1566 aa17.21■□□□□ 0.35
BCCIP-202ENST00000299130 NUCB1Q02818 461 aa17.21■□□□□ 0.35
BCCIP-202ENST00000299130 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
BCCIP-202ENST00000299130 FAM83GA6ND36 823 aa17.2■□□□□ 0.34
BCCIP-202ENST00000299130 PPP6R1Q9UPN7 881 aa17.2■□□□□ 0.34
BCCIP-202ENST00000299130 ZBTB7BO15156 539 aaPredicted RBP17.2■□□□□ 0.34
BCCIP-202ENST00000299130 ZNF853P0CG23 659 aa17.19■□□□□ 0.34
BCCIP-202ENST00000299130 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
BCCIP-202ENST00000299130 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
BCCIP-202ENST00000299130 C8orf58Q8NAV2 365 aa17.18■□□□□ 0.34
BCCIP-202ENST00000299130 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
BCCIP-202ENST00000299130 IFT57Q9NWB7 429 aa17.18■□□□□ 0.34
BCCIP-202ENST00000299130 CDK12Q9NYV4 1490 aaPredicted RBP17.17■□□□□ 0.34
BCCIP-202ENST00000299130 DLG5Q8TDM6 1919 aa17.17■□□□□ 0.34
BCCIP-202ENST00000299130 GNAI1P63096 354 aa17.16■□□□□ 0.34
BCCIP-202ENST00000299130 COG3Q96JB2 828 aa17.16■□□□□ 0.34
BCCIP-202ENST00000299130 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
BCCIP-202ENST00000299130 SIRT2Q8IXJ6 389 aa17.16■□□□□ 0.34
BCCIP-202ENST00000299130 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
BCCIP-202ENST00000299130 PTCH1Q13635 1447 aa17.15■□□□□ 0.34
BCCIP-202ENST00000299130 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
BCCIP-202ENST00000299130 ZNF428Q96B54 188 aa17.15■□□□□ 0.34
BCCIP-202ENST00000299130 CCDC61Q9Y6R9 512 aa17.15■□□□□ 0.34
BCCIP-202ENST00000299130 ANKRD45Q5TZF3 282 aa17.14■□□□□ 0.33
BCCIP-202ENST00000299130 PIK3R4Q99570 1358 aa17.14■□□□□ 0.33
BCCIP-202ENST00000299130 MON2Q7Z3U7 1717 aa17.14■□□□□ 0.33
BCCIP-202ENST00000299130 ARHGAP45Q92619 1136 aa17.14■□□□□ 0.33
BCCIP-202ENST00000299130 CALD1Q05682 793 aaKnown RBP17.13■□□□□ 0.33
BCCIP-202ENST00000299130 AEBP1Q8IUX7 1158 aa17.13■□□□□ 0.33
BCCIP-202ENST00000299130 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
BCCIP-202ENST00000299130 ABCC4O15439 1325 aa17.13■□□□□ 0.33
BCCIP-202ENST00000299130 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
BCCIP-202ENST00000299130 C3P01024 1663 aa17.12■□□□□ 0.33
BCCIP-202ENST00000299130 NUTM2FA1L443 756 aa17.11■□□□□ 0.33
BCCIP-202ENST00000299130 KRT24Q2M2I5 525 aa17.11■□□□□ 0.33
BCCIP-202ENST00000299130 AKAP12Q02952 1782 aa17.11■□□□□ 0.33
BCCIP-202ENST00000299130 ROBO2Q9HCK4 1378 aa17.1■□□□□ 0.33
BCCIP-202ENST00000299130 TECPR2O15040 1411 aa17.09■□□□□ 0.33
BCCIP-202ENST00000299130 EIF4A2Q14240 407 aaKnown RBP17.09■□□□□ 0.33
BCCIP-202ENST00000299130 KNDC1Q76NI1 1749 aa17.09■□□□□ 0.33
BCCIP-202ENST00000299130 RBM25P49756 843 aaKnown RBP17.09■□□□□ 0.33
BCCIP-202ENST00000299130 BMP2KLQ5H9B9 411 aa17.09■□□□□ 0.33
BCCIP-202ENST00000299130 GCC1Q96CN9 775 aa17.09■□□□□ 0.33
BCCIP-202ENST00000299130 ITSN1Q15811 1721 aa17.08■□□□□ 0.33
BCCIP-202ENST00000299130 SULT6B1Q6IMI4 303 aa17.08■□□□□ 0.33
BCCIP-202ENST00000299130 LMOD3Q0VAK6 560 aa17.08■□□□□ 0.32
BCCIP-202ENST00000299130 SIRT1Q96EB6 747 aa17.08■□□□□ 0.32
BCCIP-202ENST00000299130 ZNF692Q9BU19 519 aaPredicted RBP17.08■□□□□ 0.32
BCCIP-202ENST00000299130 ESF1Q9H501 851 aaKnown RBP17.08■□□□□ 0.32
BCCIP-202ENST00000299130 MCM4P33991 863 aa17.07■□□□□ 0.32
BCCIP-202ENST00000299130 HSCBQ8IWL3 235 aa17.07■□□□□ 0.32
BCCIP-202ENST00000299130 KIF2CQ99661 725 aa17.07■□□□□ 0.32
BCCIP-202ENST00000299130 CHMP5Q9NZZ3 219 aa17.07■□□□□ 0.32
BCCIP-202ENST00000299130 MCM10Q7L590 875 aa17.06■□□□□ 0.32
BCCIP-202ENST00000299130 TTC21BQ7Z4L5 1316 aa17.06■□□□□ 0.32
BCCIP-202ENST00000299130 ACEP12821 1306 aa17.06■□□□□ 0.32
BCCIP-202ENST00000299130 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
BCCIP-202ENST00000299130 TNRQ92752 1358 aa17.05■□□□□ 0.32
BCCIP-202ENST00000299130 TBC1D9Q6ZT07 1266 aa17.05■□□□□ 0.32
BCCIP-202ENST00000299130 API5Q9BZZ5 524 aaKnown RBP17.05■□□□□ 0.32
BCCIP-202ENST00000299130 NRKQ7Z2Y5 1582 aa17.05■□□□□ 0.32
BCCIP-202ENST00000299130 TMEM2Q9UHN6 1383 aa17.05■□□□□ 0.32
BCCIP-202ENST00000299130 SOX12O15370 315 aa17.04■□□□□ 0.32
BCCIP-202ENST00000299130 HSP90AB2PQ58FF8 381 aa17.04■□□□□ 0.32
BCCIP-202ENST00000299130 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
BCCIP-202ENST00000299130 ADAMTS13Q76LX8 1427 aa17.04■□□□□ 0.32
BCCIP-202ENST00000299130 CD2BP2O95400 341 aaKnown RBP17.03■□□□□ 0.32
BCCIP-202ENST00000299130 PEAK1Q9H792 1746 aa17.03■□□□□ 0.32
BCCIP-202ENST00000299130 LTKP29376 864 aa17.03■□□□□ 0.32
BCCIP-202ENST00000299130 DDIT3P35638 169 aa17.03■□□□□ 0.32
BCCIP-202ENST00000299130 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
BCCIP-202ENST00000299130 HDGFP51858 240 aaKnown RBP17.02■□□□□ 0.32
BCCIP-202ENST00000299130 RBM42Q9BTD8 480 aaKnown RBP17.02■□□□□ 0.32
BCCIP-202ENST00000299130 GZF1Q9H116 711 aaPredicted RBP17.02■□□□□ 0.32
BCCIP-202ENST00000299130 RGS12O14924 1447 aa17.02■□□□□ 0.32
BCCIP-202ENST00000299130 UBR1Q8IWV7 1749 aa17.02■□□□□ 0.32
BCCIP-202ENST00000299130 GSPT1P15170 499 aaKnown RBP17.02■□□□□ 0.31
BCCIP-202ENST00000299130 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.31
BCCIP-202ENST00000299130 SNX21Q969T3 373 aa17.02■□□□□ 0.31
BCCIP-202ENST00000299130 ARXQ96QS3 562 aa17.02■□□□□ 0.31
BCCIP-202ENST00000299130 OVOS2A0A0J9YW53 1432 aa17.01■□□□□ 0.31
BCCIP-202ENST00000299130 OVOS2Q6IE36 1432 aa17.01■□□□□ 0.31
BCCIP-202ENST00000299130 CHL1O00533 1208 aa17.01■□□□□ 0.31
BCCIP-202ENST00000299130 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
BCCIP-202ENST00000299130 INTS3Q68E01 1043 aaKnown RBP17■□□□□ 0.31
BCCIP-202ENST00000299130 PLEKHM2Q8IWE5 1019 aa17■□□□□ 0.31
BCCIP-202ENST00000299130 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
BCCIP-202ENST00000299130 DCTPP1Q9H773 170 aa16.99■□□□□ 0.31
BCCIP-202ENST00000299130 TOPAZ1Q8N9V7 1692 aa16.99■□□□□ 0.31
BCCIP-202ENST00000299130 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
BCCIP-202ENST00000299130 FOXO3O43524 673 aa16.99■□□□□ 0.31
BCCIP-202ENST00000299130 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
BCCIP-202ENST00000299130 USP6P35125 1406 aa16.99■□□□□ 0.31
BCCIP-202ENST00000299130 OTUD7AQ8TE49 926 aaPredicted RBP16.98■□□□□ 0.31
BCCIP-202ENST00000299130 PTPRUQ92729 1446 aa16.98■□□□□ 0.31
BCCIP-202ENST00000299130 ATP10DQ9P241 1426 aa16.98■□□□□ 0.31
BCCIP-202ENST00000299130 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
BCCIP-202ENST00000299130 KIF24Q5T7B8 1368 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms