RNA–Protein interactions for RNA: ENST00000298274.12

PCDH11X-201, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,767 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-201ENST00000298274 PARD3Q8TEW0 1356 aa15.07■□□□□ 0
PCDH11X-201ENST00000298274 IP6K1Q92551 441 aa15.07■□□□□ 0
PCDH11X-201ENST00000298274 IFNL2Q8IZJ0 200 aa15.07■□□□□ 0
PCDH11X-201ENST00000298274 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
PCDH11X-201ENST00000298274 IL16Q14005 1332 aa15.06■□□□□ 0
PCDH11X-201ENST00000298274 DCCP43146 1447 aa15.06■□□□□ 0
PCDH11X-201ENST00000298274 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
PCDH11X-201ENST00000298274 SUPT16HQ9Y5B9 1047 aaKnown RBP15.06■□□□□ 0
PCDH11X-201ENST00000298274 SOS1Q07889 1333 aaPredicted RBP15.06■□□□□ 0
PCDH11X-201ENST00000298274 ROBO2Q9HCK4 1378 aa15.06■□□□□ 0
PCDH11X-201ENST00000298274 RRP7AQ9Y3A4 280 aaKnown RBP15.05■□□□□ 0
PCDH11X-201ENST00000298274 ANP32AP39687 249 aaKnown RBP15.05■□□□□ -0
PCDH11X-201ENST00000298274 TAF7LQ5H9L4 462 aa15.05■□□□□ -0
PCDH11X-201ENST00000298274 NRXN1Q9ULB1 1477 aa15.05■□□□□ -0
PCDH11X-201ENST00000298274 GCP02774 474 aa15.05■□□□□ -0
PCDH11X-201ENST00000298274 ITPRIPQ8IWB1 547 aa15.05■□□□□ -0
PCDH11X-201ENST00000298274 TULP4Q9NRJ4 1543 aa15.04■□□□□ -0
PCDH11X-201ENST00000298274 KIF6Q6ZMV9 814 aa15.04■□□□□ -0
PCDH11X-201ENST00000298274 ZNF330Q9Y3S2 320 aaPredicted RBP15.04■□□□□ -0
PCDH11X-201ENST00000298274 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
PCDH11X-201ENST00000298274 AATKQ6ZMQ8 1374 aa15.04■□□□□ -0
PCDH11X-201ENST00000298274 IFT57Q9NWB7 429 aa15.04■□□□□ -0
PCDH11X-201ENST00000298274 DDX19BQ9UMR2 479 aa15.04■□□□□ -0
PCDH11X-201ENST00000298274 TECPR2O15040 1411 aa15.03■□□□□ -0
PCDH11X-201ENST00000298274 CPS1P31327 1500 aa15.03■□□□□ -0
PCDH11X-201ENST00000298274 ADAMTS2O95450 1211 aa15.03■□□□□ -0
PCDH11X-201ENST00000298274 HSP90AB4PQ58FF6 505 aa15.03■□□□□ -0
PCDH11X-201ENST00000298274 TMOD3Q9NYL9 352 aa15.02■□□□□ -0
PCDH11X-201ENST00000298274 STARD3NLO95772 234 aa15.02□□□□□ -0.01
PCDH11X-201ENST00000298274 ARHGAP23Q9P227 1491 aa15.02□□□□□ -0.01
PCDH11X-201ENST00000298274 MROH1Q8NDA8 1641 aa15.02□□□□□ -0.01
PCDH11X-201ENST00000298274 BABAM1Q9NWV8 329 aa15.01□□□□□ -0.01
PCDH11X-201ENST00000298274 CDC42BPGQ6DT37 1551 aa15.01□□□□□ -0.01
PCDH11X-201ENST00000298274 TMPOP42166 694 aaKnown RBP15□□□□□ -0.01
PCDH11X-201ENST00000298274 RBM33Q96EV2 1170 aaKnown RBP15□□□□□ -0.01
PCDH11X-201ENST00000298274 LRRFIP1Q32MZ4 808 aaKnown RBP15□□□□□ -0.01
PCDH11X-201ENST00000298274 BCL11AQ9H165 835 aa15□□□□□ -0.01
PCDH11X-201ENST00000298274 EMILIN1Q9Y6C2 1016 aa15□□□□□ -0.01
PCDH11X-201ENST00000298274 TMEM131LA2VDJ0 1609 aa15□□□□□ -0.01
PCDH11X-201ENST00000298274 IL2RBP14784 551 aa15□□□□□ -0.01
PCDH11X-201ENST00000298274 TAF7Q15545 349 aaPredicted RBP15□□□□□ -0.01
PCDH11X-201ENST00000298274 USP35Q9P2H5 1018 aa14.99□□□□□ -0.01
PCDH11X-201ENST00000298274 USP6P35125 1406 aa14.99□□□□□ -0.01
PCDH11X-201ENST00000298274 PLEKHH1Q9ULM0 1364 aa14.99□□□□□ -0.01
PCDH11X-201ENST00000298274 DDX54Q8TDD1 881 aaKnown RBP14.99□□□□□ -0.01
PCDH11X-201ENST00000298274 A0A087WZG4 1122 aa14.98□□□□□ -0.01
PCDH11X-201ENST00000298274 CCDC27Q2M243 656 aa14.98□□□□□ -0.01
PCDH11X-201ENST00000298274 ZCRB1Q8TBF4 217 aaKnown RBP14.98□□□□□ -0.01
PCDH11X-201ENST00000298274 BTBD11A6QL63 1104 aa14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 AKAP4Q5JQC9 854 aa14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 PCDH11XQ9BZA7 1347 aa14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 PCDH11YQ9BZA8 1340 aa14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 GNAI3P08754 354 aa14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 ZNF652Q9Y2D9 606 aa14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 ORAI2Q96SN7 254 aa14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 ZNF335Q9H4Z2 1342 aaPredicted RBP14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 EIF2S2P20042 333 aaKnown RBP14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 C9orf78Q9NZ63 289 aaPredicted RBP14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 ADAMTS13Q76LX8 1427 aa14.97□□□□□ -0.01
PCDH11X-201ENST00000298274 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
PCDH11X-201ENST00000298274 HOXC9P31274 260 aa14.96□□□□□ -0.01
PCDH11X-201ENST00000298274 HSP90AB3PQ58FF7 597 aa14.96□□□□□ -0.01
PCDH11X-201ENST00000298274 FKBP5Q13451 457 aaPredicted RBP14.96□□□□□ -0.01
PCDH11X-201ENST00000298274 TWISTNBQ3B726 338 aaPredicted RBP14.96□□□□□ -0.01
PCDH11X-201ENST00000298274 SLC4A10Q6U841 1118 aa14.96□□□□□ -0.01
PCDH11X-201ENST00000298274 RIC3Q7Z5B4 369 aa14.96□□□□□ -0.01
PCDH11X-201ENST00000298274 DZIP1LQ8IYY4 767 aaKnown RBP14.96□□□□□ -0.01
PCDH11X-201ENST00000298274 POLKQ9UBT6 870 aa14.96□□□□□ -0.01
PCDH11X-201ENST00000298274 CCT4P50991 539 aaKnown RBP14.95□□□□□ -0.02
PCDH11X-201ENST00000298274 FMNL2Q96PY5 1086 aa14.94□□□□□ -0.02
PCDH11X-201ENST00000298274 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
PCDH11X-201ENST00000298274 ALDH1L2Q3SY69 923 aa14.94□□□□□ -0.02
PCDH11X-201ENST00000298274 ZNF772Q68DY9 489 aaPredicted RBP14.94□□□□□ -0.02
PCDH11X-201ENST00000298274 MSH5O43196 834 aa14.94□□□□□ -0.02
PCDH11X-201ENST00000298274 DDB1Q16531 1140 aa14.94□□□□□ -0.02
PCDH11X-201ENST00000298274 HDGFL1Q5TGJ6 251 aa14.94□□□□□ -0.02
PCDH11X-201ENST00000298274 CERKQ8TCT0 537 aa14.94□□□□□ -0.02
PCDH11X-201ENST00000298274 MCCP23508 829 aa14.94□□□□□ -0.02
PCDH11X-201ENST00000298274 GORABQ5T7V8 394 aa14.93□□□□□ -0.02
PCDH11X-201ENST00000298274 PPLO60437 1756 aa14.93□□□□□ -0.02
PCDH11X-201ENST00000298274 MAP3K19Q56UN5 1328 aa14.93□□□□□ -0.02
PCDH11X-201ENST00000298274 MED14O60244 1454 aa14.92□□□□□ -0.02
PCDH11X-201ENST00000298274 G3V3G9 751 aa14.92□□□□□ -0.02
PCDH11X-201ENST00000298274 RRP1P56182 461 aaKnown RBP14.92□□□□□ -0.02
PCDH11X-201ENST00000298274 DCAF8Q5TAQ9 597 aa14.92□□□□□ -0.02
PCDH11X-201ENST00000298274 C8orf37Q96NL8 207 aa14.92□□□□□ -0.02
PCDH11X-201ENST00000298274 PER1O15534 1290 aaPredicted RBP14.92□□□□□ -0.02
PCDH11X-201ENST00000298274 PDE3AQ14432 1141 aa14.92□□□□□ -0.02
PCDH11X-201ENST00000298274 HSP90AA1P07900 732 aaKnown RBP14.92□□□□□ -0.02
PCDH11X-201ENST00000298274 EIF4A2Q14240 407 aaKnown RBP14.92□□□□□ -0.02
PCDH11X-201ENST00000298274 DCAF5Q96JK2 942 aa14.92□□□□□ -0.02
PCDH11X-201ENST00000298274 QRICH2Q9H0J4 1663 aa14.91□□□□□ -0.02
PCDH11X-201ENST00000298274 ANO8Q9HCE9 1232 aaPredicted RBP14.91□□□□□ -0.02
PCDH11X-201ENST00000298274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.91□□□□□ -0.02
PCDH11X-201ENST00000298274 TNS3Q68CZ2 1445 aa14.91□□□□□ -0.02
PCDH11X-201ENST00000298274 DDRGK1Q96HY6 314 aa14.91□□□□□ -0.02
PCDH11X-201ENST00000298274 C3P01024 1663 aa14.91□□□□□ -0.02
PCDH11X-201ENST00000298274 CARD14Q9BXL6 1004 aa14.91□□□□□ -0.02
PCDH11X-201ENST00000298274 CHMP3Q9Y3E7 222 aa14.91□□□□□ -0.02
PCDH11X-201ENST00000298274 BECN1Q14457 450 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms